C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005CE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000121716-ENSG00000085514 CGP 9606 7:100352176-100400099
GeneTranscriptPositionBiotype
ENSG00000085514 (PILRA)
paired immunoglobin-like type 2 receptor alpha 		ENST00000198536 (PILRA-001) 100373445-100400099 protein_coding
ENST00000350573 (PILRA-006) 100373528-100400096 protein_coding
ENST00000394000 (PILRA-005) 100373528-100400028 protein_coding
ENST00000432297 (PILRA-003) 100367530-100399302 protein_coding
ENST00000453419 (PILRA-002) 100373458-100400096 protein_coding
ENST00000474013 (PILRA-007) 100374044-100376413 processed_transcript
ENST00000484934 (PILRA-004) 100373528-100374742 retained_intron
ENSG00000272752 (STAG3L5P-PVRIG2P-PILRB)
STAG3L5P-PVRIG2P-PILRB readthrough 		ENST00000310771 (STAG3L5P-PVRIG2P-PILRB-001) 100336114-100367831 processed_transcript
ENST00000444073 (STAG3L5P-PVRIG2P-PILRB-201) 100356748-100367824 protein_coding
ENST00000444874 (STAG3L5P-PVRIG2P-PILRB-002) 100336243-100367663 processed_transcript
ENST00000470714 (STAG3L5P-PVRIG2P-PILRB-003) 100336104-100352489 processed_transcript
ENST00000472646 (STAG3L5P-PVRIG2P-PILRB-005) 100351256-100358292 processed_transcript
ENST00000483329 (STAG3L5P-PVRIG2P-PILRB-004) 100336123-100352211 processed_transcript

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CIL_0005CE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000272752-ENSG00000272752 CGP 9606 7:100336104-100367831
GeneTranscriptPositionBiotype
ENSG00000078319 (PMS2P1)
postmeiotic segregation increased 2 pseudogene 1 		ENST00000431037 (PMS2P1-001) 100320992-100341908 unprocessed_pseudogene
ENSG00000085514 (PILRA)
paired immunoglobin-like type 2 receptor alpha 		ENST00000198536 (PILRA-001) 100373445-100400099 protein_coding
ENST00000350573 (PILRA-006) 100373528-100400096 protein_coding
ENST00000394000 (PILRA-005) 100373528-100400028 protein_coding
ENST00000432297 (PILRA-003) 100367530-100399302 protein_coding
ENST00000453419 (PILRA-002) 100373458-100400096 protein_coding
ENST00000474013 (PILRA-007) 100374044-100376413 processed_transcript
ENST00000484934 (PILRA-004) 100373528-100374742 retained_intron
ENSG00000242294 (STAG3L5P)
stromal antigen 3-like 5 pseudogene 		ENST00000414292 (STAG3L5P-002) 100336125-100338990 processed_transcript
ENST00000422479 (STAG3L5P-001) 100336125-100341328 processed_transcript
ENST00000434211 (STAG3L5P-003) 100337577-100338805 processed_transcript
ENST00000443759 (STAG3L5P-004) 100338197-100338886 transcribed_unprocessed_pseudogene
ENST00000473757 (STAG3L5P-005) 100336079-100351900 retained_intron
ENST00000488972 (STAG3L5P-007) 100336412-100349754 processed_transcript
ENST00000493499 (STAG3L5P-006) 100338177-100350158 processed_transcript
ENSG00000272752 (STAG3L5P-PVRIG2P-PILRB)
STAG3L5P-PVRIG2P-PILRB readthrough 		ENST00000310771 (STAG3L5P-PVRIG2P-PILRB-001) 100336114-100367831 processed_transcript
ENST00000444073 (STAG3L5P-PVRIG2P-PILRB-201) 100356748-100367824 protein_coding
ENST00000444874 (STAG3L5P-PVRIG2P-PILRB-002) 100336243-100367663 processed_transcript
ENST00000470714 (STAG3L5P-PVRIG2P-PILRB-003) 100336104-100352489 processed_transcript
ENST00000472646 (STAG3L5P-PVRIG2P-PILRB-005) 100351256-100358292 processed_transcript
ENST00000483329 (STAG3L5P-PVRIG2P-PILRB-004) 100336123-100352211 processed_transcript

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CIL_0005CE_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046245-ENSMUSG00000066684 CGP 10090 5:137821952-137858049
GeneTranscriptPositionBiotype
ENSMUSG00000037108 (Zcwpw1)
zinc finger, CW type with PWWP domain 1 		ENSMUST00000035852 (Zcwpw1-001) 137787798-137822621 protein_coding
ENSMUST00000127541 (Zcwpw1-002) 137799189-137801061 retained_intron
ENSMUST00000128946 (Zcwpw1-003) 137799418-137811612 processed_transcript
ENSMUST00000141642 (Zcwpw1-004) 137810829-137822321 protein_coding
ENSMUSG00000046245 (Pilra)
paired immunoglobin-like type 2 receptor alpha 		ENSMUST00000058897 (Pilra-001) 137821952-137836268 protein_coding
ENSMUST00000110980 (Pilra-002) 137823459-137836251 protein_coding
ENSMUST00000130460 (Pilra-003) 137823383-137831510 retained_intron
ENSMUSG00000066684 (Pilrb1)
paired immunoglobin-like type 2 receptor beta 1 		ENSMUST00000110978 (Pilrb1-201) 137852147-137858049 protein_coding

Mus musculus Ensembl (GRCm38)

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CIL_0005CE_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000066684-ENSMUSG00000066682 CGP 10090 5:137852147-137871758
GeneTranscriptPositionBiotype
ENSMUSG00000066682 (Pilrb2)
paired immunoglobin-like type 2 receptor beta 2 		ENSMUST00000164886 (Pilrb2-201) 137865829-137871758 protein_coding
ENSMUSG00000066684 (Pilrb1)
paired immunoglobin-like type 2 receptor beta 1 		ENSMUST00000110978 (Pilrb1-201) 137852147-137858049 protein_coding

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005CE_0001ENSG00000085514ENST00000198536ENST00000350573ENST00000394000ENST00000432297ENST00000453419ENST00000474013ENST00000484934ENSG00000272752ENST00000310771ENST00000444073ENST00000444874ENST00000470714ENST00000472646ENST00000483329CIL_0005CE_0002ENSG00000078319ENST00000431037ENSG00000085514ENST00000198536ENST00000350573ENST00000394000ENST00000432297ENST00000453419ENST00000474013ENST00000484934ENSG00000242294ENST00000414292ENST00000422479ENST00000434211ENST00000443759ENST00000473757ENST00000488972ENST00000493499ENSG00000272752ENST00000310771ENST00000444073ENST00000444874ENST00000470714ENST00000472646ENST00000483329CIL_0005CE_0003ENSMUSG00000037108ENSMUST00000035852ENSMUST00000127541ENSMUST00000128946ENSMUST00000141642ENSMUSG00000046245ENSMUST00000058897ENSMUST00000110980ENSMUST00000130460ENSMUSG00000066684ENSMUST00000110978CIL_0005CE_0004ENSMUSG00000066682ENSMUST00000164886ENSMUSG00000066684ENSMUST00000110978
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005CE_0001ENSG00000085514ENST00000198536ENST00000350573ENSG00000272752ENST00000310771ENST00000444073ENST00000444874ENST00000470714CIL_0005CE_0002ENSG00000078319ENST00000431037ENSG00000085514ENST00000198536ENST00000350573ENSG00000242294ENST00000414292ENST00000473757ENST00000493499ENSG00000272752ENST00000310771ENST00000444073ENST00000444874ENST00000470714CIL_0005CE_0003ENSMUSG00000037108ENSMUST00000035852ENSMUST00000127541ENSMUST00000128946ENSMUST00000141642ENSMUSG00000046245ENSMUST00000058897ENSMUST00000110980ENSMUST00000130460ENSMUSG00000066684ENSMUST00000110978CIL_0005CE_0004ENSMUSG00000066682ENSMUST00000164886ENSMUSG00000066684ENSMUST00000110978
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000085514 ENST00000198536 4.795±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 13.232±0.00 N/A N/A 10.120±3.55 N/A
ENST00000350573 N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.220±0.00 N/A N/A 13.088±1.71 N/A
ENST00000394000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272752 ENST00000310771 N/A N/A N/A N/A N/A 2.586±0.00 N/A N/A N/A N/A N/A 11.854±0.00 N/A N/A
ENST00000444073 4.669±0.00 26.292±0.00 N/A 9.739±0.00 11.856±0.00 9.626±0.00 3.674±0.00 27.960±0.00 8.251±0.00 10.347±1.96 7.479±1.32 38.744±13.48 6.736±2.60 87.305±38.64
ENST00000444874 N/A N/A N/A N/A 5.081±0.00 3.508±0.00 N/A 5.200±0.00 3.495±0.00 4.232±0.00 N/A N/A N/A N/A
ENST00000470714 N/A N/A N/A N/A N/A N/A 3.244±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000472646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000078319 ENST00000431037 N/A N/A N/A 8.547±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.186±0.00 N/A
ENSG00000085514 ENST00000198536 4.795±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 13.232±0.00 N/A N/A 10.120±3.55 N/A
ENST00000350573 N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.220±0.00 N/A N/A 13.088±1.71 N/A
ENST00000394000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242294 ENST00000414292 N/A N/A N/A N/A N/A 11.832±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473757 4.085±0.00 N/A N/A N/A 7.995±0.00 5.025±0.00 3.313±0.00 19.135±0.00 5.674±0.00 N/A N/A 15.547±6.30 N/A 76.620±0.00
ENST00000488972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493499 N/A N/A 22.466±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272752 ENST00000310771 N/A N/A N/A N/A N/A 2.586±0.00 N/A N/A N/A N/A N/A 11.854±0.00 N/A N/A
ENST00000444073 4.669±0.00 26.292±0.00 N/A 9.739±0.00 11.856±0.00 9.626±0.00 3.674±0.00 27.960±0.00 8.251±0.00 10.347±1.96 7.479±1.32 38.744±13.48 6.736±2.60 87.305±38.64
ENST00000444874 N/A N/A N/A N/A 5.081±0.00 3.508±0.00 N/A 5.200±0.00 3.495±0.00 4.232±0.00 N/A N/A N/A N/A
ENST00000470714 N/A N/A N/A N/A N/A N/A 3.244±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000472646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037108 ENSMUST00000035852 0.492±0.08 0.235±0.00 1.132±0.00 1.249±0.03 0.550±0.18 0.259±0.01 0.129±0.02 0.388±0.06 0.778±0.39 N/A 0.114±0.04 0.511±0.49 0.992±0.38 5.190±1.06
ENSMUST00000127541 N/A N/A N/A 1.140±0.00 N/A N/A N/A N/A N/A N/A 0.138±0.07 0.801±0.00 0.521±0.00 N/A
ENSMUST00000128946 N/A N/A N/A N/A N/A N/A N/A N/A 2.472±0.00 N/A N/A 1.105±0.42 N/A N/A
ENSMUST00000141642 N/A 0.560±0.00 N/A 0.917±0.00 N/A N/A N/A 0.647±0.02 1.114±0.00 N/A 0.146±0.06 0.581±0.24 0.712±0.09 N/A
ENSMUSG00000046245 ENSMUST00000058897 0.911±0.16 0.603±0.15 0.876±0.00 0.280±0.03 1.269±0.26 0.618±0.20 0.456±0.19 0.487±0.07 1.282±0.66 4.943±0.59 0.099±0.04 0.456±0.17 0.286±0.10 1.498±0.14
ENSMUST00000110980 N/A 0.484±0.18 N/A N/A 0.689±0.24 0.501±0.00 0.198±0.00 N/A 0.764±0.44 N/A 0.143±0.00 0.404±0.24 N/A N/A
ENSMUST00000130460 N/A 0.339±0.05 8.386±1.72 N/A N/A 0.716±0.29 N/A N/A N/A N/A N/A 0.528±0.19 0.856±0.00 N/A
ENSMUSG00000066684 ENSMUST00000110978 0.844±0.13 0.342±0.05 1.195±0.38 0.040±0.02 1.217±0.53 0.314±0.11 0.368±0.10 0.238±0.11 1.970±1.48 1.982±0.55 0.101±0.06 0.505±0.25 0.136±0.04 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000066682 ENSMUST00000164886 0.711±0.15 0.438±0.31 0.740±0.32 0.016±0.00 1.061±0.89 0.365±0.11 0.281±0.08 0.169±0.11 1.138±1.13 1.315±0.36 0.072±0.04 0.352±0.15 0.070±0.06 0.037±0.02
ENSMUSG00000066684 ENSMUST00000110978 0.844±0.13 0.342±0.05 1.195±0.38 0.040±0.02 1.217±0.53 0.314±0.11 0.368±0.10 0.238±0.11 1.970±1.48 1.982±0.55 0.101±0.06 0.505±0.25 0.136±0.04 N/A

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