C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005D8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146013-ENSG00000158402 CGP 9606 5:138252379-138338355
GeneTranscriptPositionBiotype
ENSG00000120709 (FAM53C)
family with sequence similarity 53, member C 		ENST00000239906 (FAM53C-001) 138338032-138349729 protein_coding
ENST00000434981 (FAM53C-002) 138337511-138346972 protein_coding
ENST00000505136 (FAM53C-010) 138341181-138345308 processed_transcript
ENST00000505768 (FAM53C-005) 138338015-138345245 processed_transcript
ENST00000506710 (FAM53C-009) 138333677-138337090 processed_transcript
ENST00000507506 (FAM53C-007) 138337554-138345455 processed_transcript
ENST00000511024 (FAM53C-012) 138338266-138343023 retained_intron
ENST00000511276 (FAM53C-008) 138338267-138345215 protein_coding
ENST00000511595 (FAM53C-003) 138332105-138337146 processed_transcript
ENST00000512180 (FAM53C-006) 138331935-138345058 processed_transcript
ENST00000513056 (FAM53C-004) 138338266-138347080 protein_coding
ENSG00000146013 (GFRA3)
GDNF family receptor alpha 3 		ENST00000274721 (GFRA3-001) 138252379-138274671 protein_coding
ENST00000378362 (GFRA3-002) 138252382-138274565 protein_coding
ENSG00000158402 (CDC25C)
cell division cycle 25C 		ENST00000323760 (CDC25C-001) 138285265-138331835 protein_coding
ENST00000348983 (CDC25C-201) 138285265-138331877 protein_coding
ENST00000415130 (CDC25C-002) 138285573-138331794 protein_coding
ENST00000503022 (CDC25C-005) 138291985-138331872 protein_coding
ENST00000504831 (CDC25C-008) 138325918-138328882 retained_intron
ENST00000510119 (CDC25C-006) 138325815-138338325 protein_coding
ENST00000513970 (CDC25C-003) 138285580-138338355 protein_coding
ENST00000514017 (CDC25C-007) 138285744-138292114 protein_coding
ENST00000514555 (CDC25C-004) 138285692-138331180 protein_coding
CIL_0005D8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024366-ENSMUSG00000044201 CGP 10090 18:34689903-34751533
GeneTranscriptPositionBiotype
ENSMUSG00000024366 (Gfra3)
glial cell line derived neurotrophic factor family receptor alpha 3 		ENSMUST00000025224 (Gfra3-201) 34689903-34720387 protein_coding
ENSMUSG00000044201 (Cdc25c)
cell division cycle 25C 		ENSMUST00000060710 (Cdc25c-201) 34732997-34751533 protein_coding
ENSMUSG00000078240 (Gm3550)
predicted gene 3550 		ENSMUST00000105038 (Gm3550-201) 34736359-34738014 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005D8_0001ENSG00000120709ENST00000239906ENST00000434981ENST00000505136ENST00000505768ENST00000506710ENST00000507506ENST00000511024ENST00000511276ENST00000511595ENST00000512180ENST00000513056ENSG00000146013ENST00000274721ENST00000378362ENSG00000158402ENST00000323760ENST00000348983ENST00000415130ENST00000503022ENST00000504831ENST00000510119ENST00000513970ENST00000514017ENST00000514555CIL_0005D8_0002ENSMUSG00000024366ENSMUST00000025224ENSMUSG00000044201ENSMUST00000060710ENSMUSG00000078240ENSMUST00000105038
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005D8_0001ENSG00000120709ENST00000239906ENST00000434981ENST00000511024ENST00000513056ENSG00000146013ENST00000274721ENST00000378362ENSG00000158402ENST00000323760ENST00000503022CIL_0005D8_0002ENSMUSG00000024366ENSMUST00000025224ENSMUSG00000044201ENSMUST00000060710ENSMUSG00000078240ENSMUST00000105038
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120709 ENST00000239906 3.059±0.00 2.847±0.00 1.718±0.00 8.149±0.00 2.504±0.00 6.995±0.00 2.828±1.80 N/A 3.760±0.00 3.675±0.00 5.625±0.54 5.400±3.71 4.709±2.46 5.553±0.00
ENST00000434981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.744±0.00
ENST00000505136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511024 N/A N/A 0.739±0.00 N/A 1.267±0.00 N/A N/A 0.641±0.00 N/A 1.524±0.00 N/A N/A N/A N/A
ENST00000511276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.295±0.00 32.570±0.00
ENSG00000146013 ENST00000274721 0.505±0.00 0.228±0.00 N/A N/A N/A 2.551±0.00 0.350±0.17 N/A 0.079±0.00 0.337±0.10 N/A 1.118±0.51 N/A 5.005±0.00
ENST00000378362 N/A 0.038±0.00 N/A N/A 0.190±0.12 N/A 0.478±0.00 0.222±0.00 N/A N/A 0.348±0.00 0.484±0.00 0.034±0.00 0.949±0.30
ENSG00000158402 ENST00000323760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.578±0.00 1.203±0.00 12.156±0.00
ENST00000348983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503022 N/A N/A N/A N/A N/A 1.837±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024366 ENSMUST00000025224 1.240±0.20 2.978±1.10 4.828±0.74 0.274±0.18 1.567±0.43 3.175±0.45 2.311±0.48 0.499±0.06 0.026±0.02 0.790±0.07 0.061±0.03 0.726±0.34 0.870±0.77 0.197±0.09
ENSMUSG00000044201 ENSMUST00000060710 0.243±0.13 0.072±0.04 0.095±0.06 2.177±1.53 0.105±0.02 0.890±0.31 0.033±0.02 0.036±0.00 6.346±5.57 0.173±0.05 0.021±0.00 1.141±0.55 2.679±1.79 5.664±2.23
ENSMUSG00000078240 ENSMUST00000105038 0.054±0.01 0.164±0.10 0.023±0.00 0.152±0.00 0.101±0.04 0.112±0.05 0.044±0.02 0.031±0.01 0.274±0.23 0.058±0.04 0.013±0.00 0.130±0.08 0.169±0.17 0.177±0.03

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