C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005DV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176014-ENSG00000141385 CGP 9606 18:12307669-12377314
GeneTranscriptPositionBiotype
ENSG00000141385 (AFG3L2)
AFG3-like AAA ATPase 2 		ENST00000269143 (AFG3L2-001) 12328944-12377314 protein_coding
ENST00000588893 (AFG3L2-004) 12340937-12348328 retained_intron
ENST00000590811 (AFG3L2-002) 12358704-12377002 protein_coding
ENST00000591848 (AFG3L2-003) 12358805-12360233 retained_intron
ENSG00000176014 (TUBB6)
tubulin, beta 6 class V 		ENST00000317702 (TUBB6-001) 12308059-12326619 protein_coding
ENST00000417736 (TUBB6-002) 12308241-12326563 retained_intron
ENST00000586653 (TUBB6-009) 12308241-12325267 protein_coding
ENST00000586691 (TUBB6-015) 12310967-12344320 protein_coding
ENST00000586810 (TUBB6-003) 12308241-12325763 nonsense_mediated_decay
ENST00000587204 (TUBB6-011) 12308244-12311135 retained_intron
ENST00000590103 (TUBB6-008) 12308232-12325914 protein_coding
ENST00000590388 (TUBB6-010) 12308241-12325197 nonsense_mediated_decay
ENST00000590693 (TUBB6-007) 12307669-12325181 protein_coding
ENST00000590967 (TUBB6-013) 12308253-12337225 protein_coding
ENST00000591208 (TUBB6-005) 12308262-12326332 protein_coding
ENST00000591463 (TUBB6-014) 12308263-12325353 protein_coding
ENST00000591909 (TUBB6-006) 12308234-12329826 protein_coding
ENST00000592683 (TUBB6-012) 12308247-12325124 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0005DV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001473-ENSMUSG00000024527 CGP 10090 18:67390717-67449166
GeneTranscriptPositionBiotype
ENSMUSG00000001473 (Tubb6)
tubulin, beta 6 class V 		ENSMUST00000001513 (Tubb6-201) 67390717-67402748 protein_coding
ENSMUSG00000024527 (Afg3l2)
AFG3-like AAA ATPase 2 		ENSMUST00000025408 (Afg3l2-201) 67404767-67449166 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DV_0001ENSG00000141385ENST00000269143ENST00000588893ENST00000590811ENST00000591848ENSG00000176014ENST00000317702ENST00000417736ENST00000586653ENST00000586691ENST00000586810ENST00000587204ENST00000590103ENST00000590388ENST00000590693ENST00000590967ENST00000591208ENST00000591463ENST00000591909ENST00000592683CIL_0005DV_0002ENSMUSG00000001473ENSMUST00000001513ENSMUSG00000024527ENSMUST00000025408
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DV_0001ENSG00000141385ENST00000269143ENST00000590811ENSG00000176014ENST00000317702ENST00000417736ENST00000591208CIL_0005DV_0002ENSMUSG00000001473ENSMUST00000001513ENSMUSG00000024527ENSMUST00000025408
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141385 ENST00000269143 11.530±0.00 11.004±0.00 10.074±0.00 12.161±0.12 13.051±4.82 9.745±5.38 16.023±1.58 19.259±8.62 5.488±1.32 7.665±0.00 29.732±14.63 22.614±7.60 18.997±2.99 13.618±3.72
ENST00000588893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590811 N/A N/A 35.057±0.00 21.118±0.00 17.997±0.00 38.571±0.00 22.575±0.00 15.568±0.00 23.358±0.00 16.824±0.00 19.440±0.00 37.851±0.00 N/A N/A
ENST00000591848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176014 ENST00000317702 41.280±0.00 56.890±0.00 N/A N/A 65.654±0.00 25.743±0.00 5.747±0.00 N/A N/A 4.305±0.00 N/A 80.917±23.09 66.291±1.93 33.621±0.00
ENST00000417736 N/A N/A N/A N/A 24.817±0.00 14.159±0.00 N/A N/A N/A 37.459±0.00 N/A N/A 32.797±0.00 N/A
ENST00000586653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591208 N/A 34.312±0.00 N/A N/A 45.629±0.00 N/A N/A N/A N/A 29.765±0.00 N/A N/A 42.646±0.00 N/A
ENST00000591463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001473 ENSMUST00000001513 51.302±24.25 102.926±5.08 139.964±21.15 5.942±3.93 51.125±20.29 64.191±16.07 20.212±1.09 8.540±1.40 17.416±12.70 26.706±7.55 8.492±0.78 124.147±53.92 45.234±28.46 20.153±16.82
ENSMUSG00000024527 ENSMUST00000025408 18.844±0.83 39.973±4.72 17.007±2.13 11.872±3.93 16.999±4.89 39.520±3.83 28.639±3.00 31.043±2.11 20.452±5.37 11.914±1.64 18.903±3.14 24.141±3.98 18.708±6.14 10.998±1.18

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