C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005EO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168952-ENSG00000139910 CGP 9606 14:24809656-26597754
GeneTranscriptPositionBiotype
ENSG00000139910 (NOVA1)
neuro-oncological ventral antigen 1 		ENST00000344429 (NOVA1-001) 26470118-26597440 protein_coding
ENST00000347476 (NOVA1-012) 26448718-26595499 protein_coding
ENST00000449198 (NOVA1-007) 26448528-26596075 protein_coding
ENST00000465357 (NOVA1-002) 26445888-26597486 protein_coding
ENST00000483536 (NOVA1-004) 26443093-26597519 nonsense_mediated_decay
ENST00000539517 (NOVA1-003) 26445889-26597754 protein_coding
ENST00000546546 (NOVA1-011) 26448734-26595473 nonsense_mediated_decay
ENST00000547415 (NOVA1-009) 26549351-26595478 retained_intron
ENST00000547619 (NOVA1-010) 26471951-26597495 protein_coding
ENST00000549146 (NOVA1-008) 26448828-26595626 protein_coding
ENST00000549571 (NOVA1-006) 26448852-26597082 protein_coding
ENST00000551754 (NOVA1-005) 26519199-26595461 processed_transcript
ENST00000574031 (NOVA1-013) 26479017-26597460 protein_coding
ENSG00000168952 (STXBP6)
syntaxin binding protein 6 (amisyn) 		ENST00000323944 (STXBP6-006) 24809662-25050297 protein_coding
ENST00000396700 (STXBP6-001) 24809656-25050064 protein_coding
ENST00000419632 (STXBP6-002) 24812087-25049889 protein_coding
ENST00000546511 (STXBP6-003) 24812192-25049000 protein_coding
ENST00000548182 (STXBP6-004) 24815662-25049894 nonsense_mediated_decay
ENST00000548369 (STXBP6-005) 24812492-24819477 protein_coding
ENST00000550887 (STXBP6-007) 24812300-25010640 protein_coding
ENSG00000257179 (HMGN2P6)
high mobility group nucleosomal binding domain 2 pseudogene 6 		ENST00000551091 (HMGN2P6-001) 25267064-25267336 processed_pseudogene
ENSG00000257976 (RP11-388G3.1)
 ENST00000547237 (RP11-388G3.1-001) 25431193-25432234 processed_pseudogene
ENSG00000257986 (RP11-314P15.2)
 ENST00000546412 (RP11-314P15.2-001) 25835858-26143305 lincRNA
ENSG00000258098 (RP11-89K22.1)
 ENST00000552425 (RP11-89K22.1-001) 25124487-25126998 lincRNA
ENSG00000262119 (RP11-483C6.1)
 ENST00000572358 (RP11-483C6.1-001) 26592747-26594517 sense_intronic
ENSG00000279521 (RP11-314P15.1)
 ENST00000623151 (RP11-314P15.1-001) 25820366-25822741 TEC
CIL_0005EO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046314-ENSMUSG00000021047 CGP 10090 12:44852488-46818775
GeneTranscriptPositionBiotype
ENSMUSG00000021047 (Nova1)
neuro-oncological ventral antigen 1 		ENSMUST00000021438 (Nova1-201) 46694517-46818775 protein_coding
ENSMUSG00000046314 (Stxbp6)
syntaxin binding protein 6 (amisyn) 		ENSMUST00000053768 (Stxbp6-001) 44855221-45074493 protein_coding
ENSMUST00000120531 (Stxbp6-002) 44852488-45074112 protein_coding
ENSMUST00000130202 (Stxbp6-005) 44861365-45012964 processed_transcript
ENSMUST00000139750 (Stxbp6-004) 45012932-45074318 nonsense_mediated_decay
ENSMUST00000143376 (Stxbp6-003) 44902877-45074154 protein_coding
ENSMUSG00000081636 (Gm15901)
predicted gene 15901 		ENSMUST00000117663 (Gm15901-001) 44923196-44924373 processed_pseudogene
ENSMUSG00000086012 (Gm15902)
predicted gene 15902 		ENSMUST00000146949 (Gm15902-001) 44959647-44970878 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005EO_0001ENSG00000139910ENST00000344429ENST00000347476ENST00000449198ENST00000465357ENST00000483536ENST00000539517ENST00000546546ENST00000547415ENST00000547619ENST00000549146ENST00000549571ENST00000551754ENST00000574031ENSG00000168952ENST00000323944ENST00000396700ENST00000419632ENST00000546511ENST00000548182ENST00000548369ENST00000550887ENSG00000257179ENST00000551091ENSG00000257976ENST00000547237ENSG00000257986ENST00000546412ENSG00000258098ENST00000552425ENSG00000262119ENST00000572358ENSG00000279521ENST00000623151CIL_0005EO_0002ENSMUSG00000021047ENSMUST00000021438ENSMUSG00000046314ENSMUST00000053768ENSMUST00000120531ENSMUST00000130202ENSMUST00000139750ENSMUST00000143376ENSMUSG00000081636ENSMUST00000117663ENSMUSG00000086012ENSMUST00000146949
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005EO_0001ENSG00000139910ENST00000344429ENST00000449198ENST00000465357ENST00000483536ENST00000539517ENST00000546546ENST00000547415ENST00000547619ENST00000549146ENST00000574031ENSG00000168952ENST00000323944ENST00000396700ENST00000419632ENST00000546511ENST00000548182ENST00000548369ENST00000550887ENSG00000257179ENST00000551091ENSG00000257976ENST00000547237ENSG00000257986ENST00000546412ENSG00000258098ENST00000552425ENSG00000262119ENST00000572358ENSG00000279521ENST00000623151CIL_0005EO_0002ENSMUSG00000021047ENSMUST00000021438ENSMUSG00000046314ENSMUST00000053768ENSMUST00000120531ENSMUST00000139750ENSMUSG00000081636ENSMUST00000117663ENSMUSG00000086012ENSMUST00000146949
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139910 ENST00000344429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A 3.499±0.00
ENST00000347476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449198 N/A N/A N/A N/A N/A N/A 0.177±0.00 N/A N/A 0.459±0.00 N/A N/A 0.061±0.00 N/A
ENST00000465357 N/A N/A N/A 3.119±0.00 0.873±0.00 0.608±0.00 N/A 0.183±0.00 0.055±0.00 N/A N/A 0.331±0.01 N/A 3.255±0.00
ENST00000483536 2.221±0.00 N/A N/A 1.089±0.00 0.622±0.00 1.151±0.00 0.067±0.00 N/A 0.014±0.00 0.083±0.00 N/A 0.128±0.10 0.011±0.00 N/A
ENST00000539517 6.561±0.00 1.269±0.00 0.324±0.00 4.170±1.84 2.539±2.09 3.325±0.00 0.294±0.23 1.786±0.00 1.012±0.00 0.359±0.15 0.585±0.00 0.656±0.45 0.036±0.02 3.518±1.50
ENST00000546546 N/A N/A N/A N/A 4.491±0.00 N/A N/A N/A N/A 0.909±0.00 N/A N/A N/A N/A
ENST00000547415 N/A N/A 1.647±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547619 N/A N/A N/A N/A 2.077±0.00 N/A 0.231±0.00 N/A N/A N/A N/A 0.421±0.00 N/A N/A
ENST00000549146 N/A 4.010±0.00 N/A N/A N/A N/A N/A N/A 0.146±0.00 N/A 2.239±0.00 N/A N/A N/A
ENST00000549571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574031 N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A 0.124±0.00 N/A N/A N/A N/A
ENSG00000168952 ENST00000323944 0.404±0.00 N/A N/A 6.203±2.21 0.627±0.09 1.133±0.00 1.228±0.50 0.507±0.00 2.051±0.00 5.163±0.00 0.379±0.00 0.309±0.01 3.027±0.75 1.043±0.00
ENST00000396700 N/A N/A N/A 1.634±0.00 N/A N/A N/A 0.439±0.00 0.114±0.00 2.451±0.00 N/A N/A 1.795±0.00 0.233±0.00
ENST00000419632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.362±0.00
ENST00000546511 1.031±0.00 N/A N/A N/A 2.564±0.00 N/A 1.490±0.00 N/A 4.679±0.00 9.351±6.44 0.190±0.15 0.473±0.32 5.961±2.81 1.943±0.00
ENST00000548182 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.344±0.00 N/A 0.054±0.01 N/A N/A
ENST00000548369 N/A N/A N/A N/A N/A 3.830±0.00 N/A N/A 0.408±0.00 N/A N/A N/A N/A N/A
ENST00000550887 N/A N/A N/A 3.596±0.00 N/A 1.819±0.18 4.603±0.00 N/A 0.497±0.00 N/A N/A 0.811±0.00 N/A 1.724±0.00
ENSG00000257179 ENST00000551091 N/A N/A N/A 0.162±0.00 N/A N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A N/A
ENSG00000257976 ENST00000547237 N/A N/A N/A N/A 0.016±0.00 N/A 0.014±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000257986 ENST00000546412 N/A N/A 0.600±0.00 0.383±0.31 0.381±0.00 N/A N/A N/A N/A N/A N/A 0.063±0.00 N/A 0.038±0.00
ENSG00000258098 ENST00000552425 N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A 0.922±0.06
ENSG00000262119 ENST00000572358 0.180±0.00 0.162±0.00 0.076±0.00 0.133±0.03 0.563±0.04 0.251±0.18 0.059±0.03 0.073±0.00 0.657±0.00 0.370±0.00 N/A 0.043±0.01 N/A 0.452±0.37
ENSG00000279521 ENST00000623151 N/A N/A N/A 0.044±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021047 ENSMUST00000021438 3.697±1.40 1.404±0.41 0.278±0.04 26.979±16.02 3.565±1.82 0.704±0.18 0.628±0.06 0.228±0.08 0.090±0.04 1.695±0.29 0.361±0.09 1.915±0.93 0.081±0.10 0.374±0.18
ENSMUSG00000046314 ENSMUST00000053768 3.528±0.87 9.823±2.02 3.582±0.03 1.769±0.05 3.785±1.77 15.482±1.65 1.079±0.25 5.165±0.35 4.217±0.94 9.095±3.60 N/A 14.637±7.04 2.668±2.91 1.350±0.65
ENSMUST00000120531 0.603±0.06 N/A 4.113±0.00 2.363±0.43 1.370±0.63 2.036±0.51 N/A 0.832±0.01 1.325±0.19 3.336±0.00 0.989±0.00 4.634±2.72 0.978±0.99 0.471±0.31
ENSMUST00000130202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139750 N/A 13.526±2.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081636 ENSMUST00000117663 0.047±0.00 N/A 0.010±0.00 0.120±0.00 N/A N/A 0.046±0.00 N/A 0.014±0.00 N/A N/A 0.275±0.13 0.092±0.00 0.053±0.00
ENSMUSG00000086012 ENSMUST00000146949 N/A N/A N/A 0.069±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 0.072±0.00

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