C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005FZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000043093-ENSG00000078070 CGP 9606 3:182938074-183116075
GeneTranscriptPositionBiotype
ENSG00000043093 (DCUN1D1)
DCN1, defective in cullin neddylation 1, domain containing 1 		ENST00000292782 (DCUN1D1-001) 182938074-182980643 protein_coding
ENST00000460412 (DCUN1D1-004) 182963931-182985932 protein_coding
ENST00000466812 (DCUN1D1-006) 182964000-182985913 protein_coding
ENST00000469954 (DCUN1D1-002) 182945034-182985953 protein_coding
ENST00000487822 (DCUN1D1-005) 182963948-182985931 protein_coding
ENST00000492563 (DCUN1D1-008) 182945104-182980520 nonsense_mediated_decay
ENST00000497606 (DCUN1D1-007) 182961315-182980151 protein_coding
ENSG00000078070 (MCCC1)
methylcrotonoyl-CoA carboxylase 1 (alpha) 		ENST00000265594 (MCCC1-001) 183015218-183099587 protein_coding
ENST00000464601 (MCCC1-012) 183015289-183022717 retained_intron
ENST00000466650 (MCCC1-007) 183071048-183099530 nonsense_mediated_decay
ENST00000473955 (MCCC1-013) 183092373-183094607 retained_intron
ENST00000476176 (MCCC1-003) 183020170-183099550 protein_coding
ENST00000486226 (MCCC1-010) 183072427-183099495 nonsense_mediated_decay
ENST00000487634 (MCCC1-009) 183071046-183099518 nonsense_mediated_decay
ENST00000489909 (MCCC1-011) 183022469-183037355 processed_transcript
ENST00000490284 (MCCC1-008) 183071006-183099523 nonsense_mediated_decay
ENST00000492597 (MCCC1-002) 183015218-183116075 protein_coding
ENST00000495767 (MCCC1-004) 183015551-183099518 nonsense_mediated_decay
ENST00000497830 (MCCC1-005) 183015220-183099530 nonsense_mediated_decay
ENST00000497959 (MCCC1-006) 183015289-183099243 nonsense_mediated_decay
ENST00000539926 (MCCC1-201) 183015220-183099460 protein_coding
ENST00000610757 (MCCC1-202) 183015220-183099577 protein_coding
ENSG00000243368 (MCCC1-AS1)
MCCC1 antisense RNA 1 		ENST00000471731 (MCCC1-AS1-001) 183016255-183017808 antisense
ENSG00000244346 (RP11-531F16.3)
 ENST00000460975 (RP11-531F16.3-001) 182950783-182956307 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0005FZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027708-ENSMUSG00000027709 CGP 10090 3:35892105-36000678
GeneTranscriptPositionBiotype
ENSMUSG00000027708 (Dcun1d1)
DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) 		ENSMUST00000108182 (Dcun1d1-001) 35892978-35932966 protein_coding
ENSMUST00000121632 (Dcun1d1-002) 35893506-35930074 protein_coding
ENSMUST00000123312 (Dcun1d1-007) 35909144-35932815 processed_transcript
ENSMUST00000128301 (Dcun1d1-005) 35897458-35932334 protein_coding
ENSMUST00000132052 (Dcun1d1-004) 35919001-35937439 protein_coding
ENSMUST00000145392 (Dcun1d1-008) 35897522-35909457 processed_transcript
ENSMUST00000148465 (Dcun1d1-003) 35897475-35937445 protein_coding
ENSMUST00000154069 (Dcun1d1-006) 35918998-35930119 protein_coding
ENSMUST00000178098 (Dcun1d1-201) 35892105-35932334 protein_coding
ENSMUSG00000027709 (Mccc1)
methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) 		ENSMUST00000029259 (Mccc1-001) 35959839-36000678 protein_coding
ENSMUST00000131161 (Mccc1-006) 35975796-35989932 nonsense_mediated_decay
ENSMUST00000132823 (Mccc1-007) 35975193-35976587 retained_intron
ENSMUST00000140010 (Mccc1-005) 35984986-36000641 nonsense_mediated_decay
ENSMUST00000144266 (Mccc1-002) 35959312-36000609 nonsense_mediated_decay
ENSMUST00000148922 (Mccc1-003) 35973890-35995879 retained_intron
ENSMUST00000149693 (Mccc1-008) 35959839-35961109 retained_intron
ENSMUST00000151716 (Mccc1-004) 35961727-35969111 retained_intron
ENSMUSG00000085655 (Gm15952)
predicted gene 15952 		ENSMUST00000122858 (Gm15952-001) 35933045-35942717 antisense
ENSMUST00000144542 (Gm15952-002) 35933057-35938048 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FZ_0001ENSG00000043093ENST00000292782ENST00000460412ENST00000466812ENST00000469954ENST00000487822ENST00000492563ENST00000497606ENSG00000078070ENST00000265594ENST00000464601ENST00000466650ENST00000473955ENST00000476176ENST00000486226ENST00000487634ENST00000489909ENST00000490284ENST00000492597ENST00000495767ENST00000497830ENST00000497959ENST00000539926ENST00000610757ENSG00000243368ENST00000471731ENSG00000244346ENST00000460975CIL_0005FZ_0002ENSMUSG00000027708ENSMUST00000108182ENSMUST00000121632ENSMUST00000123312ENSMUST00000128301ENSMUST00000132052ENSMUST00000145392ENSMUST00000148465ENSMUST00000154069ENSMUST00000178098ENSMUSG00000027709ENSMUST00000029259ENSMUST00000131161ENSMUST00000132823ENSMUST00000140010ENSMUST00000144266ENSMUST00000148922ENSMUST00000149693ENSMUST00000151716ENSMUSG00000085655ENSMUST00000122858ENSMUST00000144542
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FZ_0001ENSG00000043093ENST00000292782ENST00000469954ENST00000492563ENST00000497606ENSG00000078070ENST00000265594ENST00000464601ENST00000476176ENST00000487634ENST00000490284ENST00000492597ENST00000495767ENST00000497830ENST00000539926ENST00000610757ENSG00000243368ENST00000471731ENSG00000244346ENST00000460975CIL_0005FZ_0002ENSMUSG00000027708ENSMUST00000108182ENSMUST00000121632ENSMUST00000123312ENSMUST00000128301ENSMUST00000148465ENSMUST00000178098ENSMUSG00000027709ENSMUST00000029259ENSMUST00000131161ENSMUST00000140010ENSMUST00000144266ENSMUST00000148922ENSMUST00000151716ENSMUSG00000085655ENSMUST00000122858ENSMUST00000144542
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000043093 ENST00000292782 2.837±0.00 1.463±0.00 2.006±0.00 4.109±0.15 2.382±1.49 3.028±0.70 1.220±0.94 4.258±0.49 3.478±1.20 2.824±1.07 3.227±0.00 4.886±2.72 1.825±1.18 4.802±0.70
ENST00000460412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469954 N/A N/A N/A N/A N/A N/A 2.969±0.00 N/A N/A N/A N/A N/A 1.166±0.10 71.541±19.26
ENST00000487822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492563 N/A N/A 9.158±0.00 15.247±0.00 6.281±0.00 11.877±0.00 N/A 12.375±0.00 9.930±0.00 12.465±0.00 7.232±0.00 19.794±0.00 N/A N/A
ENST00000497606 N/A N/A 5.117±0.00 N/A 9.314±0.00 N/A N/A N/A 12.687±0.00 10.484±0.00 N/A 14.744±0.00 5.293±0.00 118.809±0.00
ENSG00000078070 ENST00000265594 2.046±0.00 N/A 4.960±0.00 3.809±1.18 6.238±3.80 1.580±0.62 6.196±2.63 8.864±0.37 5.754±0.74 3.703±0.15 0.874±0.00 4.583±2.51 3.070±1.40 4.027±2.38
ENST00000464601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.856±0.00 N/A N/A N/A
ENST00000466650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476176 N/A N/A N/A N/A 2.427±0.00 1.461±0.00 1.489±0.00 6.342±0.00 1.811±0.00 5.075±0.00 0.912±0.00 3.959±0.00 N/A N/A
ENST00000486226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487634 N/A N/A N/A N/A N/A 4.746±0.00 N/A N/A N/A N/A 9.412±0.00 10.242±0.00 N/A N/A
ENST00000489909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490284 N/A N/A N/A 6.977±0.00 5.854±0.00 N/A N/A 16.591±0.00 N/A 10.626±0.00 N/A N/A N/A 10.608±0.00
ENST00000492597 N/A 1.737±0.00 N/A 1.608±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.355±0.00 N/A N/A N/A
ENST00000497830 N/A N/A N/A 4.109±0.00 4.366±0.00 1.557±0.00 N/A N/A N/A N/A N/A 2.934±0.45 0.729±0.00 2.849±0.00
ENST00000497959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539926 N/A N/A N/A N/A N/A 1.631±0.00 N/A 7.296±0.00 5.435±0.00 N/A 2.454±0.00 6.317±0.00 N/A 4.140±0.00
ENST00000610757 3.152±0.00 4.071±0.00 N/A N/A N/A 1.286±0.00 2.393±0.00 N/A 2.252±0.00 N/A N/A N/A N/A 2.397±0.00
ENSG00000243368 ENST00000471731 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.530±0.00 N/A N/A N/A N/A
ENSG00000244346 ENST00000460975 0.023±0.00 0.370±0.00 N/A N/A 0.156±0.00 0.453±0.00 0.022±0.00 0.069±0.00 0.067±0.05 N/A N/A 0.183±0.06 0.083±0.00 0.105±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027708 ENSMUST00000108182 1.594±0.73 1.295±0.27 6.758±0.43 5.330±1.45 0.877±0.43 1.706±0.39 2.071±0.25 2.236±1.16 6.085±4.87 1.419±0.56 6.430±1.09 1.909±1.33 3.404±2.37 6.380±0.20
ENSMUST00000121632 1.629±0.20 1.762±0.48 N/A 1.606±0.46 1.824±0.42 2.034±0.87 1.346±0.14 1.792±0.45 3.546±1.17 2.119±0.51 N/A 2.756±0.90 2.047±0.49 10.443±3.42
ENSMUST00000123312 N/A N/A N/A 6.133±0.00 N/A N/A N/A N/A N/A N/A N/A 17.698±0.00 8.138±3.08 104.074±0.00
ENSMUST00000128301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.577±0.00 N/A
ENSMUST00000132052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 120.757±69.57
ENSMUST00000154069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178098 N/A 1.771±0.24 1.318±0.29 1.351±0.53 0.483±0.27 N/A 0.520±0.02 0.979±0.16 2.306±1.17 N/A 1.284±0.17 1.575±0.76 1.114±0.48 N/A
ENSMUSG00000027709 ENSMUST00000029259 19.111±4.61 N/A 7.116±0.54 5.193±2.09 9.919±2.80 2.000±0.65 14.046±1.26 22.710±5.18 7.135±1.85 1.667±0.08 10.470±1.03 5.935±5.58 5.379±2.11 1.660±0.25
ENSMUST00000131161 N/A N/A N/A 30.119±0.00 N/A N/A N/A N/A N/A N/A N/A 48.103±0.00 16.210±2.33 N/A
ENSMUST00000132823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.743±0.00 11.964±0.00 N/A
ENSMUST00000144266 6.942±1.11 8.673±2.44 1.176±0.00 N/A 7.185±2.17 2.480±1.00 5.655±1.80 12.445±1.35 3.290±2.92 2.063±1.00 N/A 5.823±1.72 N/A 1.425±0.00
ENSMUST00000148922 10.179±3.60 28.446±7.01 N/A N/A 20.665±5.12 4.461±1.19 9.828±1.86 13.148±0.57 6.103±1.66 4.376±0.18 N/A 7.216±1.34 1.841±0.00 N/A
ENSMUST00000149693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151716 N/A N/A 0.454±0.00 0.678±0.00 N/A N/A N/A N/A N/A 0.536±0.00 N/A N/A N/A N/A
ENSMUSG00000085655 ENSMUST00000122858 1.308±0.02 5.980±0.47 0.901±0.22 0.348±0.18 1.895±0.97 N/A 1.103±0.43 2.596±0.53 1.732±1.10 1.194±0.53 1.359±0.22 2.137±1.70 0.720±0.26 0.790±0.36
ENSMUST00000144542 0.381±0.01 N/A 0.300±0.10 0.183±0.08 N/A N/A 0.166±0.00 0.353±0.00 0.265±0.08 0.451±0.00 0.192±0.07 0.940±0.41 0.378±0.22 0.623±0.13

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