C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005GB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130988-ENSG00000147123 CGP 9606 X:47078355-47145504
GeneTranscriptPositionBiotype
ENSG00000130988 (RGN)
regucalcin 		ENST00000336169 (RGN-002) 47080859-47093310 protein_coding
ENST00000352078 (RGN-001) 47078380-47093313 protein_coding
ENST00000397180 (RGN-201) 47078355-47093314 protein_coding
ENST00000457380 (RGN-202) 47078355-47093314 protein_coding
ENST00000469346 (RGN-004) 47078425-47084961 processed_transcript
ENST00000475448 (RGN-003) 47084538-47093308 processed_transcript
ENSG00000147123 (NDUFB11)
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa 		ENST00000276062 (NDUFB11-002) 47142220-47145038 protein_coding
ENST00000377811 (NDUFB11-001) 47142216-47145504 protein_coding
ENSG00000182872 (RBM10)
RNA binding motif protein 10 		ENST00000329236 (RBM10-201) 47145447-47186812 protein_coding
ENST00000345781 (RBM10-001) 47145279-47186813 protein_coding
ENST00000377604 (RBM10-005) 47144869-47186811 protein_coding
ENST00000478410 (RBM10-004) 47179315-47181543 processed_transcript
ENST00000496012 (RBM10-003) 47175012-47181762 processed_transcript
ENSG00000201659 (RNU12-2P)
RNA, U12 small nuclear 2, pseudogene 		ENST00000364789 (RNU12-2P-201) 47132671-47132826 snRNA
ENSG00000206685 (RNU6-1189P)
RNA, U6 small nuclear 1189, pseudogene 		ENST00000383958 (RNU6-1189P-201) 47087506-47087612 snRNA
CIL_0005GB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023070-ENSMUSG00000031059 CGP 10090 X:20549787-20617619
GeneTranscriptPositionBiotype
ENSMUSG00000023070 (Rgn)
regucalcin 		ENSMUST00000023832 (Rgn-001) 20549787-20562089 protein_coding
ENSMUSG00000031059 (Ndufb11)
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11 		ENSMUST00000116621 (Ndufb11-001) 20615326-20617619 protein_coding
ENSMUSG00000031060 (Rbm10)
RNA binding motif protein 10 		ENSMUST00000064911 (Rbm10-201) 20620098-20650684 protein_coding
ENSMUST00000082089 (Rbm10-202) 20620098-20650684 protein_coding
ENSMUST00000084383 (Rbm10-002) 20617783-20650901 protein_coding
ENSMUST00000115374 (Rbm10-001) 20617622-20650901 protein_coding
ENSMUST00000115375 (Rbm10-004) 20617503-20650888 protein_coding
ENSMUST00000141128 (Rbm10-003) 20617785-20649196 processed_transcript
ENSMUST00000177738 (Rbm10-203) 20620098-20650684 protein_coding
ENSMUSG00000064398 (Gm23628)
predicted gene, 23628 		ENSMUST00000082464 (Gm23628-201) 20614523-20614695 snRNA
ENSMUSG00000084830 (Gm14539)
predicted gene 14539 		ENSMUST00000117527 (Gm14539-001) 20581141-20581314 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005GB_0001ENSG00000130988ENST00000336169ENST00000352078ENST00000397180ENST00000457380ENST00000469346ENST00000475448ENSG00000147123ENST00000276062ENST00000377811ENSG00000182872ENST00000329236ENST00000345781ENST00000377604ENST00000478410ENST00000496012ENSG00000201659ENST00000364789ENSG00000206685ENST00000383958CIL_0005GB_0002ENSMUSG00000023070ENSMUST00000023832ENSMUSG00000031059ENSMUST00000116621ENSMUSG00000031060ENSMUST00000064911ENSMUST00000082089ENSMUST00000084383ENSMUST00000115374ENSMUST00000115375ENSMUST00000141128ENSMUST00000177738ENSMUSG00000064398ENSMUST00000082464ENSMUSG00000084830ENSMUST00000117527
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005GB_0001ENSG00000130988ENST00000336169ENST00000352078ENST00000397180ENST00000457380ENST00000475448ENSG00000147123ENST00000276062ENST00000377811ENSG00000182872ENST00000329236ENST00000345781ENST00000377604ENSG00000201659ENST00000364789ENSG00000206685ENST00000383958CIL_0005GB_0002ENSMUSG00000023070ENSMUST00000023832ENSMUSG00000031059ENSMUST00000116621ENSMUSG00000031060ENSMUST00000064911ENSMUST00000082089ENSMUST00000084383ENSMUST00000115374ENSMUST00000141128ENSMUST00000177738ENSMUSG00000064398ENSMUST00000082464ENSMUSG00000084830ENSMUST00000117527
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130988 ENST00000336169 N/A N/A N/A N/A N/A N/A 0.865±0.00 22.514±0.00 14.528±0.00 N/A N/A 0.557±0.00 1.471±0.67 0.696±0.00
ENST00000352078 0.407±0.00 1.193±0.00 2.759±0.00 4.369±1.93 2.537±1.69 0.938±0.00 4.171±0.00 15.331±9.27 17.095±14.70 2.701±1.92 0.937±0.32 4.758±2.60 5.278±2.75 1.543±0.31
ENST00000397180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.063±0.00 N/A N/A N/A
ENST00000457380 N/A N/A N/A 1.675±0.74 0.790±0.42 N/A 1.347±1.01 25.437±0.00 0.439±0.00 0.985±0.00 0.254±0.00 0.984±0.89 2.130±0.00 N/A
ENST00000469346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475448 1.301±0.00 1.117±0.00 N/A 8.828±0.00 N/A 0.919±0.63 2.227±0.00 8.068±0.00 28.332±0.00 N/A N/A 3.950±3.37 1.402±0.00 4.125±0.00
ENSG00000147123 ENST00000276062 34.924±0.00 67.134±0.00 N/A 34.119±27.50 50.715±0.00 29.766±25.76 37.097±31.82 31.483±20.84 35.018±32.34 41.035±0.00 54.396±37.17 44.108±17.16 62.693±8.52 28.823±12.00
ENST00000377811 N/A N/A 5.481±0.00 8.824±0.00 5.384±0.00 5.967±0.00 16.576±12.91 10.124±2.31 15.159±12.44 9.375±4.14 27.589±1.77 17.622±9.33 35.992±2.59 N/A
ENSG00000182872 ENST00000329236 9.977±0.00 9.727±0.00 N/A 7.300±0.00 9.533±0.00 11.151±0.00 5.357±0.00 9.935±0.00 N/A 3.760±0.00 8.475±0.00 13.483±9.86 9.944±0.96 5.553±3.52
ENST00000345781 4.970±0.00 8.478±0.00 1.418±0.00 2.383±0.00 4.754±2.03 4.848±1.46 N/A 8.852±0.00 3.193±2.15 2.407±0.88 N/A 7.999±3.95 13.396±3.25 5.979±0.87
ENST00000377604 N/A N/A 0.474±0.00 4.180±0.00 N/A 0.792±0.00 1.311±0.00 1.525±0.00 N/A N/A N/A 2.141±0.00 N/A N/A
ENST00000478410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201659 ENST00000364789 N/A N/A N/A 0.273±0.00 N/A N/A N/A N/A N/A N/A N/A 0.251±0.00 N/A N/A
ENSG00000206685 ENST00000383958 N/A N/A N/A N/A 0.206±0.00 N/A N/A 2.253±0.00 N/A N/A N/A N/A N/A 0.471±0.29
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023070 ENSMUST00000023832 0.034±0.00 0.361±0.14 0.073±0.00 0.081±0.02 0.735±0.45 0.193±0.07 0.147±0.06 1.111±0.60 238.455±120.91 0.211±0.11 0.053±0.04 0.561±0.24 0.305±0.20 0.258±0.13
ENSMUSG00000031059 ENSMUST00000116621 96.517±3.37 83.110±9.76 91.761±20.70 56.119±6.26 80.270±23.48 100.961±16.46 219.312±103.94 192.124±58.50 102.603±19.40 72.050±6.04 267.733±32.12 79.733±22.26 72.094±27.52 11.239±4.74
ENSMUSG00000031060 ENSMUST00000064911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.974±0.00
ENSMUST00000082089 N/A 7.558±0.09 N/A N/A N/A 9.303±1.78 N/A N/A N/A 7.223±0.00 N/A 11.002±2.64 N/A 2.436±0.00
ENSMUST00000084383 N/A N/A 9.146±0.59 17.519±7.33 N/A N/A N/A 10.044±0.00 12.350±4.48 N/A N/A 20.678±14.03 20.077±11.00 2.992±1.34
ENSMUST00000115374 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.329±0.00 N/A N/A N/A 1.108±0.24
ENSMUST00000115375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141128 12.107±3.03 22.275±2.66 N/A 11.185±0.00 15.558±2.82 18.074±3.64 N/A 15.641±0.64 10.529±0.86 13.005±0.73 N/A 25.012±2.49 N/A 1.924±0.23
ENSMUST00000177738 N/A N/A N/A 6.588±0.00 N/A N/A N/A N/A 6.616±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000064398 ENSMUST00000082464 N/A N/A 2.071±0.00 N/A N/A N/A N/A N/A N/A N/A 1.461±0.11 4.232±0.00 N/A N/A
ENSMUSG00000084830 ENSMUST00000117527 N/A N/A N/A N/A N/A 18.177±0.00 61.671±31.61 61.733±24.47 9.500±5.31 N/A N/A N/A N/A 29.523±17.34

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