C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005GT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042777-ENSDARG00000006916 CGP 7955 11:6445948-6456842
GeneTranscriptPositionBiotype
ENSDARG00000006916 (VMAC)
vimentin-type intermediate filament associated coiled-coil protein 		ENSDART00000016475 (VMAC-201) 6453375-6456842 protein_coding
ENSDARG00000042777 (ndufa11)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11 		ENSDART00000062787 (ndufa11-201) 6445948-6451947 protein_coding
CIL_0005GT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000174886-ENSG00000267314 CGP 9606 19:5891276-5914707
GeneTranscriptPositionBiotype
ENSG00000105519 (CAPS)
calcyphosine 		ENST00000222125 (CAPS-001) 5914236-5915877 protein_coding
ENST00000452990 (CAPS-002) 5914240-5915877 protein_coding
ENST00000585541 (CAPS-005) 5914272-5915130 retained_intron
ENST00000588776 (CAPS-003) 5911707-5915642 protein_coding
ENST00000588865 (CAPS-004) 5914273-5915033 protein_coding
ENST00000590428 (CAPS-006) 5914256-5914913 retained_intron
ENST00000618299 (CAPS-201) 5914182-5916208 protein_coding
ENSG00000174886 (NDUFA11)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 		ENST00000308961 (NDUFA11-002) 5894677-5903756 protein_coding
ENST00000418389 (NDUFA11-001) 5891276-5903786 protein_coding
ENST00000591160 (NDUFA11-005) 5902431-5904006 processed_transcript
ENST00000591341 (NDUFA11-006) 5894681-5896681 retained_intron
ENST00000592634 (NDUFA11-004) 5894675-5903771 protein_coding
ENST00000593233 (NDUFA11-003) 5894677-5903754 nonsense_mediated_decay
ENSG00000187650 (VMAC)
vimentin-type intermediate filament associated coiled-coil protein 		ENST00000339485 (VMAC-001) 5904858-5910853 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005GT_0001ENSDARG00000006916ENSDART00000016475ENSDARG00000042777ENSDART00000062787CIL_0005GT_0002ENSG00000105519ENST00000222125ENST00000452990ENST00000585541ENST00000588776ENST00000588865ENST00000590428ENST00000618299ENSG00000174886ENST00000308961ENST00000418389ENST00000591160ENST00000591341ENST00000592634ENST00000593233ENSG00000187650ENST00000339485
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005GT_0001ENSDARG00000006916ENSDART00000016475ENSDARG00000042777ENSDART00000062787CIL_0005GT_0002ENSG00000105519ENST00000222125ENST00000452990ENST00000588776ENSG00000174886ENST00000308961ENST00000592634ENST00000593233ENSG00000187650ENST00000339485
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006916 ENSDART00000016475 N/A N/A N/A 1.563±0.00 N/A N/A 0.498±0.00 0.234±0.00 0.497±0.00 N/A 0.237±0.00 N/A N/A N/A
ENSDARG00000042777 ENSDART00000062787 N/A N/A N/A 48.639±44.06 N/A N/A 171.365±120.62 48.413±47.71 5.848±0.00 N/A 158.686±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105519 ENST00000222125 N/A N/A N/A 39.823±0.00 N/A N/A N/A 30.744±0.00 2.863±0.00 88.144±80.65 N/A 118.255±86.52 31.301±9.84 N/A
ENST00000452990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.178±0.00 N/A N/A
ENST00000585541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588776 N/A 6.533±0.00 1.195±0.00 N/A 4.468±0.00 N/A N/A N/A 0.755±0.00 N/A N/A 3.912±1.53 N/A N/A
ENST00000588865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000174886 ENST00000308961 91.116±0.00 119.710±0.00 3.878±0.00 57.041±31.62 74.840±68.91 75.350±61.77 93.211±77.74 62.958±44.11 79.145±69.41 62.329±53.46 67.183±30.98 113.082±92.18 208.836±103.64 65.173±41.52
ENST00000418389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592634 N/A 5.111±0.00 0.230±0.00 1.496±0.00 0.290±0.00 0.732±0.00 N/A 3.470±0.00 N/A 0.878±0.00 N/A 1.660±1.14 N/A N/A
ENST00000593233 N/A N/A N/A N/A N/A N/A N/A N/A 1.269±0.00 N/A N/A N/A N/A N/A
ENSG00000187650 ENST00000339485 N/A N/A N/A N/A 1.767±0.00 N/A 0.329±0.00 1.023±0.00 0.963±0.00 1.862±0.00 N/A N/A N/A N/A

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