C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005ID_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196233-ENSG00000155640 CGP 9606 10:96832260-96986212
GeneTranscriptPositionBiotype
ENSG00000155640 (C10orf12)
chromosome 10 open reading frame 12 		ENST00000286067 (C10orf12-001) 96981284-96986212 protein_coding
ENSG00000196233 (LCOR)
ligand dependent nuclear receptor corepressor 		ENST00000356016 (LCOR-010) 96832955-96958891 protein_coding
ENST00000371097 (LCOR-009) 96832980-96958926 protein_coding
ENST00000371103 (LCOR-015) 96832282-96958933 protein_coding
ENST00000463415 (LCOR-012) 96949223-96958515 processed_transcript
ENST00000469510 (LCOR-013) 96907286-96908090 retained_intron
ENST00000493486 (LCOR-011) 96907285-96949126 processed_transcript
ENST00000498444 (LCOR-014) 96949142-96981043 processed_transcript
ENST00000540664 (LCOR-201) 96832260-96964431 protein_coding
ENSG00000221465 (AL162502.1)
 ENST00000408538 (AL162502.1-201) 96920702-96920791 miRNA
ENSG00000232875 (HMGN2P35)
high mobility group nucleosomal binding domain 2 pseudogene 35 		ENST00000412164 (HMGN2P35-001) 96915633-96915902 processed_pseudogene
CIL_0005ID_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025019-ENSMUSG00000090673 CGP 10090 19:41482645-41586536
GeneTranscriptPositionBiotype
ENSMUSG00000025019 (Lcor)
ligand dependent nuclear receptor corepressor 		ENSMUST00000067795 (Lcor-201) 41482645-41562246 protein_coding
ENSMUST00000163929 (Lcor-202) 41549639-41559781 protein_coding
ENSMUSG00000090673 (Gm340)
predicted gene 340 		ENSMUST00000172371 (Gm340-201) 41582370-41586536 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ID_0001ENSG00000155640ENST00000286067ENSG00000196233ENST00000356016ENST00000371097ENST00000371103ENST00000463415ENST00000469510ENST00000493486ENST00000498444ENST00000540664ENSG00000221465ENST00000408538ENSG00000232875ENST00000412164CIL_0005ID_0002ENSMUSG00000025019ENSMUST00000067795ENSMUST00000163929ENSMUSG00000090673ENSMUST00000172371
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ID_0001ENSG00000155640ENST00000286067ENSG00000196233ENST00000356016ENST00000371103ENST00000540664ENSG00000221465ENST00000408538ENSG00000232875ENST00000412164CIL_0005ID_0002ENSMUSG00000025019ENSMUST00000067795ENSMUST00000163929ENSMUSG00000090673ENSMUST00000172371
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155640 ENST00000286067 0.571±0.00 0.568±0.00 0.989±0.00 0.630±0.00 0.523±0.00 1.098±0.00 0.793±0.00 0.436±0.00 0.271±0.00 1.374±0.44 0.309±0.11 0.691±0.27 0.527±0.25 1.187±0.01
ENSG00000196233 ENST00000356016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.756±0.00 N/A N/A N/A
ENST00000371097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371103 N/A N/A 1.904±0.00 N/A 2.407±0.00 2.256±0.00 0.741±0.00 N/A N/A N/A N/A N/A 0.433±0.00 N/A
ENST00000463415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540664 0.549±0.00 0.669±0.00 N/A 0.368±0.00 0.675±0.00 0.360±0.00 0.442±0.12 1.859±0.00 0.288±0.00 0.666±0.00 0.303±0.10 1.388±0.00 0.662±0.47 1.391±0.00
ENSG00000221465 ENST00000408538 N/A 0.541±0.00 N/A 0.166±0.00 N/A N/A 0.568±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000232875 ENST00000412164 0.059±0.00 0.128±0.00 N/A 0.262±0.00 1.476±0.00 N/A 0.124±0.00 N/A N/A 0.334±0.00 0.060±0.00 0.436±0.00 N/A 0.282±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025019 ENSMUST00000067795 0.953±0.39 1.419±0.22 N/A 0.972±0.00 1.986±0.54 2.147±0.25 0.997±0.21 1.415±0.43 1.464±0.39 2.127±0.16 0.284±0.01 1.998±0.42 2.898±0.54 0.419±0.12
ENSMUST00000163929 N/A N/A N/A N/A 0.152±0.00 N/A N/A N/A N/A N/A N/A 0.309±0.00 N/A N/A
ENSMUSG00000090673 ENSMUST00000172371 N/A N/A N/A 1.696±0.00 N/A N/A 0.380±0.00 N/A 0.407±0.14 N/A 0.306±0.11 1.480±1.11 5.690±2.16 0.802±0.34

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