C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005J8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000013306-ENSG00000030582 CGP 9606 17:44319625-44353102
GeneTranscriptPositionBiotype
ENSG00000013306 (SLC25A39)
solute carrier family 25, member 39 		ENST00000225308 (SLC25A39-001) 44319625-44324870 protein_coding
ENST00000377095 (SLC25A39-006) 44319636-44324815 protein_coding
ENST00000537904 (SLC25A39-005) 44319870-44324827 protein_coding
ENST00000585523 (SLC25A39-009) 44322527-44324830 protein_coding
ENST00000585636 (SLC25A39-011) 44321477-44324827 protein_coding
ENST00000585695 (SLC25A39-003) 44320938-44324827 retained_intron
ENST00000586016 (SLC25A39-008) 44319673-44324782 protein_coding
ENST00000586633 (SLC25A39-010) 44322422-44324822 protein_coding
ENST00000588049 (SLC25A39-012) 44321434-44324818 protein_coding
ENST00000588315 (SLC25A39-002) 44320629-44324827 retained_intron
ENST00000588767 (SLC25A39-015) 44319995-44322445 protein_coding
ENST00000590194 (SLC25A39-007) 44319642-44324809 protein_coding
ENST00000591006 (SLC25A39-004) 44319627-44324147 retained_intron
ENST00000591151 (SLC25A39-013) 44322473-44324806 retained_intron
ENST00000592372 (SLC25A39-014) 44319691-44321147 retained_intron
ENST00000592857 (SLC25A39-017) 44322439-44324770 protein_coding
ENST00000593166 (SLC25A39-016) 44319820-44321524 nonsense_mediated_decay
ENSG00000030582 (GRN)
granulin 		ENST00000053867 (GRN-001) 44345280-44353102 protein_coding
ENST00000585348 (GRN-021) 44350911-44351599 retained_intron
ENST00000585512 (GRN-009) 44345302-44349275 protein_coding
ENST00000586242 (GRN-022) 44352202-44353102 protein_coding
ENST00000586443 (GRN-003) 44350539-44353043 protein_coding
ENST00000586782 (GRN-018) 44345314-44351163 nonsense_mediated_decay
ENST00000587109 (GRN-006) 44345265-44349474 protein_coding
ENST00000587387 (GRN-016) 44345302-44350511 protein_coding
ENST00000587518 (GRN-007) 44345265-44350287 protein_coding
ENST00000587958 (GRN-015) 44345306-44349811 retained_intron
ENST00000588143 (GRN-013) 44345282-44350469 protein_coding
ENST00000588170 (GRN-012) 44345246-44349894 retained_intron
ENST00000588237 (GRN-017) 44345302-44351044 protein_coding
ENST00000589265 (GRN-002) 44345305-44353082 protein_coding
ENST00000589536 (GRN-005) 44345262-44349736 protein_coding
ENST00000589923 (GRN-019) 44350772-44351795 processed_transcript
ENST00000590984 (GRN-020) 44350289-44351300 retained_intron
ENST00000591740 (GRN-011) 44345302-44350283 protein_coding
ENST00000592323 (GRN-014) 44345302-44349789 retained_intron
ENST00000592783 (GRN-010) 44345302-44350304 protein_coding
ENST00000593167 (GRN-008) 44345298-44350325 protein_coding
ENSG00000267211 (RP5-1067M6.3)
 ENST00000588260 (RP5-1067M6.3-001) 44328613-44331462 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0005J8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018677-ENSMUSG00000034708 CGP 10090 11:102402985-102437048
GeneTranscriptPositionBiotype
ENSMUSG00000018677 (Slc25a39)
solute carrier family 25, member 39 		ENSMUST00000018821 (Slc25a39-001) 102402985-102407544 protein_coding
ENSMUST00000107098 (Slc25a39-003) 102402985-102407489 protein_coding
ENSMUST00000123688 (Slc25a39-005) 102404389-102407463 retained_intron
ENSMUST00000124755 (Slc25a39-004) 102404854-102407946 protein_coding
ENSMUST00000128825 (Slc25a39-012) 102403042-102404493 protein_coding
ENSMUST00000130436 (Slc25a39-008) 102404609-102406955 protein_coding
ENSMUST00000134669 (Slc25a39-013) 102403791-102407508 nonsense_mediated_decay
ENSMUST00000141535 (Slc25a39-015) 102404018-102407456 retained_intron
ENSMUST00000142097 (Slc25a39-014) 102404062-102407487 nonsense_mediated_decay
ENSMUST00000147160 (Slc25a39-011) 102405023-102406808 processed_transcript
ENSMUST00000147860 (Slc25a39-009) 102405739-102406884 retained_intron
ENSMUST00000149777 (Slc25a39-007) 102404484-102407315 protein_coding
ENSMUST00000153395 (Slc25a39-002) 102403145-102407506 retained_intron
ENSMUST00000154001 (Slc25a39-006) 102404787-102407383 protein_coding
ENSMUST00000155104 (Slc25a39-010) 102404032-102406816 protein_coding
ENSMUSG00000034685 (Fam171a2)
family with sequence similarity 171, member A2 		ENSMUST00000049057 (Fam171a2-001) 102436981-102447682 protein_coding
ENSMUST00000145190 (Fam171a2-002) 102438748-102439777 processed_transcript
ENSMUST00000152015 (Fam171a2-003) 102440233-102447594 processed_transcript
ENSMUSG00000034708 (Grn)
granulin 		ENSMUST00000049460 (Grn-001) 102430315-102436809 protein_coding
ENSMUST00000123500 (Grn-009) 102434718-102435944 retained_intron
ENSMUST00000125819 (Grn-010) 102435285-102436573 protein_coding
ENSMUST00000127530 (Grn-011) 102435306-102436064 retained_intron
ENSMUST00000129997 (Grn-002) 102430518-102434446 protein_coding
ENSMUST00000135517 (Grn-003) 102432785-102434257 retained_intron
ENSMUST00000138451 (Grn-006) 102434102-102434891 retained_intron
ENSMUST00000148580 (Grn-004) 102433932-102434593 retained_intron
ENSMUST00000176953 (Grn-007) 102434099-102435262 retained_intron
ENSMUST00000177428 (Grn-008) 102435416-102437048 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005J8_0001ENSG00000013306ENST00000225308ENST00000377095ENST00000537904ENST00000586016ENST00000588767ENST00000590194ENST00000591006ENST00000591151ENST00000592372ENSG00000030582ENST00000053867ENST00000586242ENST00000586443ENST00000586782ENST00000589265ENSG00000267211ENST00000588260CIL_0005J8_0002ENSMUSG00000018677ENSMUST00000018821ENSMUST00000107098ENSMUST00000128825ENSMUST00000134669ENSMUST00000149777ENSMUST00000153395ENSMUST00000155104ENSMUSG00000034685ENSMUST00000049057ENSMUSG00000034708ENSMUST00000049460ENSMUST00000125819ENSMUST00000135517
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000013306 ENST00000225308 7.112±0.00 N/A 0.718±0.00 1.832±0.00 N/A 7.786±5.60 0.383±0.00 17.824±13.58 12.528±0.00 15.428±14.01 2.321±0.56 40.772±16.58 29.140±13.11 17.854±2.87
ENST00000377095 9.197±0.00 20.092±0.00 2.405±0.00 4.311±0.00 11.532±0.00 7.367±0.00 6.742±0.00 N/A 6.199±4.67 12.791±0.00 6.652±0.00 33.409±33.41 16.638±2.93 29.144±14.33
ENST00000537904 N/A N/A N/A 5.154±0.00 N/A 9.510±0.00 N/A N/A N/A N/A 2.551±0.00 N/A N/A N/A
ENST00000585523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586016 17.619±0.00 33.026±0.00 N/A 4.753±0.00 32.554±0.00 21.268±0.00 3.916±3.76 62.019±0.00 16.353±0.00 16.132±0.00 N/A 42.496±14.11 31.458±0.70 26.976±9.32
ENST00000586633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588767 N/A N/A 2.686±0.00 1.628±0.00 N/A 3.620±0.00 0.797±0.00 N/A N/A N/A N/A 4.779±0.00 N/A N/A
ENST00000590194 N/A N/A N/A N/A 9.364±0.00 N/A 5.064±0.00 N/A 8.306±0.00 20.886±0.00 4.939±0.00 52.527±36.43 20.484±10.09 17.258±0.00
ENST00000591006 N/A N/A N/A N/A 0.983±0.00 1.167±0.00 N/A N/A 0.268±0.00 0.108±0.00 N/A 1.245±0.00 N/A N/A
ENST00000591151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.781±0.00 N/A N/A N/A
ENST00000592372 N/A 22.043±0.00 N/A 8.555±0.00 N/A 10.965±0.00 N/A 42.536±0.00 19.996±0.00 25.483±0.00 8.659±0.00 N/A N/A 21.392±0.00
ENST00000592857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000030582 ENST00000053867 142.373±0.00 109.472±0.00 N/A 9.698±8.03 70.716±60.15 36.744±27.96 25.026±22.10 33.479±25.75 23.732±16.28 84.174±64.90 15.303±12.42 79.312±54.19 284.864±161.67 38.243±32.94
ENST00000585348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586242 N/A 101.306±0.00 N/A N/A N/A 47.235±0.00 N/A N/A 30.883±0.00 98.244±0.00 N/A N/A N/A N/A
ENST00000586443 N/A N/A N/A 0.738±0.00 N/A N/A N/A 15.656±13.15 N/A N/A N/A 30.385±27.43 51.546±0.00 7.166±0.00
ENST00000586782 N/A N/A 3.302±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589265 N/A N/A N/A N/A N/A N/A N/A 16.861±0.00 N/A N/A N/A 48.851±0.00 76.595±0.00 17.008±4.40
ENST00000589536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267211 ENST00000588260 0.112±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018677 ENSMUST00000018821 77.597±8.76 152.733±34.76 40.379±0.57 23.925±11.10 58.507±13.63 66.341±29.01 37.878±18.32 236.083±14.49 167.137±34.12 30.608±11.01 17.851±3.02 66.415±18.04 68.752±25.73 264.596±134.06
ENSMUST00000107098 28.752±2.33 N/A N/A N/A 34.343±10.10 35.371±2.60 23.360±3.19 91.117±27.77 45.937±11.29 18.585±4.70 N/A 31.652±6.91 N/A 93.094±21.74
ENSMUST00000123688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128825 N/A N/A N/A 13.996±0.00 22.388±0.00 N/A N/A N/A N/A N/A N/A 24.961±0.00 14.070±0.61 35.824±0.00
ENSMUST00000130436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134669 N/A N/A N/A 10.846±0.00 N/A N/A N/A N/A N/A N/A N/A 25.137±0.00 19.944±4.44 38.802±0.00
ENSMUST00000141535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149777 75.691±12.40 330.230±51.48 N/A 17.880±0.00 125.519±46.30 142.867±30.96 47.131±9.78 200.386±58.40 250.396±62.85 53.059±0.43 N/A 98.999±25.67 N/A 229.259±29.00
ENSMUST00000153395 N/A N/A N/A N/A 12.171±0.00 N/A N/A N/A N/A N/A 5.843±0.00 19.371±4.19 N/A N/A
ENSMUST00000154001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155104 N/A N/A N/A N/A N/A N/A N/A N/A 66.004±0.00 N/A N/A 71.359±13.63 N/A N/A
ENSMUSG00000034685 ENSMUST00000049057 19.899±0.21 6.106±0.90 N/A 48.473±11.10 9.016±0.55 4.830±0.61 N/A 5.934±0.00 N/A 6.836±0.24 N/A 20.723±4.66 N/A 0.864±0.00
ENSMUST00000145190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034708 ENSMUST00000049460 119.204±21.65 50.957±30.38 97.619±8.85 11.061±5.03 89.692±28.33 53.462±24.44 35.751±8.06 68.441±12.15 41.368±14.39 82.331±14.11 6.579±0.61 78.389±41.37 58.276±32.55 8.007±0.99
ENSMUST00000123500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125819 N/A N/A N/A 18.906±0.00 N/A N/A N/A N/A N/A N/A 2.330±0.00 103.225±0.00 100.268±50.88 5.048±0.00
ENSMUST00000127530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135517 N/A 92.659±11.83 N/A N/A 69.766±14.48 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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