C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005JZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078560-ENSDARG00000075964 CGP 7955 7:36075098-36231492
GeneTranscriptPositionBiotype
ENSDARG00000075964 (plekhg4)
pleckstrin homology domain containing, family G (with RhoGef domain) member 4 		ENSDART00000108473 (plekhg4-201) 36176914-36231492 protein_coding
ENSDARG00000078560 (slc9a5)
solute carrier family 9 (sodium/hydrogen exchanger), member 5 		ENSDART00000081338 (slc9a5-001) 36075098-36107931 protein_coding
CIL_0005JZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135740-ENSG00000196155 CGP 9606 16:67237683-67289499
GeneTranscriptPositionBiotype
ENSG00000135723 (FHOD1)
formin homology 2 domain containing 1 		ENST00000258201 (FHOD1-001) 67229389-67247658 protein_coding
ENST00000561922 (FHOD1-003) 67233681-67247478 nonsense_mediated_decay
ENST00000562266 (FHOD1-009) 67234180-67234754 retained_intron
ENST00000566006 (FHOD1-008) 67230314-67231080 retained_intron
ENST00000567509 (FHOD1-007) 67231450-67233761 nonsense_mediated_decay
ENST00000567561 (FHOD1-006) 67230329-67232058 nonsense_mediated_decay
ENST00000567752 (FHOD1-002) 67229391-67247464 retained_intron
ENST00000568595 (FHOD1-005) 67233948-67236616 nonsense_mediated_decay
ENST00000569085 (FHOD1-010) 67229387-67230196 retained_intron
ENST00000569888 (FHOD1-011) 67231790-67234031 retained_intron
ENSG00000135740 (SLC9A5)
solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5 		ENST00000299798 (SLC9A5-001) 67248950-67272190 protein_coding
ENST00000561472 (SLC9A5-009) 67248979-67256478 processed_transcript
ENST00000563723 (SLC9A5-003) 67248977-67272190 retained_intron
ENST00000564704 (SLC9A5-002) 67237683-67272190 retained_intron
ENST00000564812 (SLC9A5-004) 67248872-67272058 nonsense_mediated_decay
ENST00000566345 (SLC9A5-008) 67246915-67259942 protein_coding
ENST00000566626 (SLC9A5-006) 67252809-67270980 protein_coding
ENST00000566638 (SLC9A5-007) 67249078-67265148 retained_intron
ENST00000567247 (SLC9A5-010) 67252736-67265106 protein_coding
ENSG00000168676 (KCTD19)
potassium channel tetramerization domain containing 19 		ENST00000304372 (KCTD19-001) 67289448-67326763 protein_coding
ENST00000561625 (KCTD19-009) 67305374-67326739 processed_transcript
ENST00000562721 (KCTD19-005) 67303177-67326714 nonsense_mediated_decay
ENST00000562841 (KCTD19-010) 67289433-67293823 protein_coding
ENST00000562860 (KCTD19-008) 67299406-67320790 processed_transcript
ENST00000566295 (KCTD19-011) 67320646-67326097 protein_coding
ENST00000566392 (KCTD19-002) 67289433-67326753 retained_intron
ENST00000567976 (KCTD19-006) 67304453-67321910 protein_coding
ENST00000568736 (KCTD19-007) 67303116-67326760 retained_intron
ENST00000569333 (KCTD19-003) 67289435-67326729 retained_intron
ENST00000570049 (KCTD19-004) 67289428-67326726 retained_intron
ENSG00000196155 (PLEKHG4)
pleckstrin homology domain containing, family G (with RhoGef domain) member 4 		ENST00000360461 (PLEKHG4-002) 67277510-67289479 protein_coding
ENST00000379344 (PLEKHG4-005) 67279524-67289473 protein_coding
ENST00000393966 (PLEKHG4-007) 67279896-67289055 nonsense_mediated_decay
ENST00000427155 (PLEKHG4-004) 67279238-67289479 protein_coding
ENST00000450733 (PLEKHG4-006) 67279589-67289499 protein_coding
ENST00000562144 (PLEKHG4-011) 67277820-67280273 protein_coding
ENST00000562289 (PLEKHG4-014) 67287572-67289307 retained_intron
ENST00000562744 (PLEKHG4-017) 67279147-67280934 protein_coding
ENST00000563969 (PLEKHG4-001) 67277510-67289479 nonsense_mediated_decay
ENST00000565773 (PLEKHG4-013) 67278834-67280368 protein_coding
ENST00000565899 (PLEKHG4-012) 67278157-67280265 protein_coding
ENST00000567136 (PLEKHG4-020) 67287950-67289072 nonsense_mediated_decay
ENST00000567938 (PLEKHG4-018) 67279596-67280275 protein_coding
ENST00000568621 (PLEKHG4-019) 67279553-67280152 protein_coding
ENST00000569875 (PLEKHG4-016) 67287900-67288942 protein_coding
ENSG00000262691 (CTC-277H1.7)
 ENST00000573063 (CTC-277H1.7-001) 67261108-67263784 retained_intron
CIL_0005JZ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000014786-ENSMUSG00000014782 CGP 10090 8:105348258-105382862
GeneTranscriptPositionBiotype
ENSMUSG00000014782 (Plekhg4)
pleckstrin homology domain containing, family G (with RhoGef domain) member 4 		ENSMUST00000014927 (Plekhg4-001) 105375381-105382862 protein_coding
ENSMUST00000159286 (Plekhg4-002) 105374904-105382859 nonsense_mediated_decay
ENSMUST00000160191 (Plekhg4-007) 105375381-105382241 protein_coding
ENSMUST00000160650 (Plekhg4-004) 105373274-105375560 protein_coding
ENSMUST00000161672 (Plekhg4-003) 105380494-105382855 retained_intron
ENSMUSG00000014786 (Slc9a5)
solute carrier family 9 (sodium/hydrogen exchanger), member 5 		ENSMUST00000073149 (Slc9a5-201) 105348258-105369881 protein_coding
ENSMUSG00000051648 (Kctd19)
potassium channel tetramerisation domain containing 19 		ENSMUST00000063071 (Kctd19-001) 105382807-105413502 protein_coding
ENSMUST00000167294 (Kctd19-002) 105382807-105413502 protein_coding
ENSMUST00000168196 (Kctd19-003) 105382942-105385417 protein_coding
ENSMUST00000168888 (Kctd19-004) 105393826-105413456 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005JZ_0001ENSDARG00000075964ENSDART00000108473ENSDARG00000078560ENSDART00000081338CIL_0005JZ_0002ENSG00000135723ENST00000258201ENST00000561922ENST00000562266ENST00000566006ENST00000567509ENST00000567561ENST00000567752ENST00000568595ENST00000569085ENST00000569888ENSG00000135740ENST00000299798ENST00000561472ENST00000563723ENST00000564704ENST00000564812ENST00000566345ENST00000566626ENST00000566638ENST00000567247ENSG00000168676ENST00000304372ENST00000561625ENST00000562721ENST00000562841ENST00000562860ENST00000566295ENST00000566392ENST00000567976ENST00000568736ENST00000569333ENST00000570049ENSG00000196155ENST00000360461ENST00000379344ENST00000393966ENST00000427155ENST00000450733ENST00000562144ENST00000562289ENST00000562744ENST00000563969ENST00000565773ENST00000565899ENST00000567136ENST00000567938ENST00000568621ENST00000569875ENSG00000262691ENST00000573063CIL_0005JZ_0003ENSMUSG00000014782ENSMUST00000014927ENSMUST00000159286ENSMUST00000160191ENSMUST00000160650ENSMUST00000161672ENSMUSG00000014786ENSMUST00000073149ENSMUSG00000051648ENSMUST00000063071ENSMUST00000167294ENSMUST00000168196ENSMUST00000168888
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005JZ_0001ENSDARG00000075964ENSDART00000108473ENSDARG00000078560ENSDART00000081338CIL_0005JZ_0002ENSG00000135723ENST00000258201ENST00000561922ENST00000566006ENST00000567509ENST00000567561ENST00000567752ENST00000568595ENST00000569085ENSG00000135740ENST00000299798ENST00000564704ENST00000564812ENST00000566626ENSG00000168676ENST00000304372ENST00000566295ENST00000566392ENST00000569333ENST00000570049ENSG00000196155ENST00000360461ENST00000379344ENST00000393966ENST00000427155ENST00000450733ENST00000562289ENST00000563969ENST00000569875ENSG00000262691ENST00000573063CIL_0005JZ_0003ENSMUSG00000014782ENSMUST00000014927ENSMUST00000159286ENSMUST00000160191ENSMUST00000161672ENSMUSG00000014786ENSMUST00000073149ENSMUSG00000051648ENSMUST00000063071ENSMUST00000167294ENSMUST00000168196
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000075964 ENSDART00000108473 N/A N/A N/A 1.195±0.73 N/A N/A 2.909±2.46 0.894±0.51 0.057±0.00 N/A 1.643±0.00 N/A N/A N/A
ENSDARG00000078560 ENSDART00000081338 N/A N/A N/A 4.036±1.78 N/A N/A 0.072±0.03 0.335±0.07 N/A N/A 0.287±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135723 ENST00000258201 4.813±0.00 5.977±0.00 0.218±0.00 N/A 4.424±3.77 2.313±0.00 0.679±0.64 3.139±2.93 1.282±0.00 5.120±4.15 19.222±13.98 13.117±13.12 10.570±0.77 3.615±0.48
ENST00000561922 N/A N/A N/A N/A N/A N/A 0.137±0.00 0.363±0.00 N/A N/A N/A N/A N/A N/A
ENST00000562266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566006 N/A N/A N/A N/A N/A 2.906±0.00 0.437±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000567509 N/A N/A N/A N/A N/A N/A N/A 1.459±0.00 N/A N/A N/A N/A N/A N/A
ENST00000567561 N/A N/A N/A N/A 2.534±0.00 3.275±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567752 N/A N/A 0.158±0.00 N/A N/A N/A N/A N/A 0.744±0.00 3.263±0.00 N/A 2.006±0.00 N/A N/A
ENST00000568595 N/A N/A N/A N/A N/A N/A N/A 0.757±0.00 N/A N/A N/A N/A N/A N/A
ENST00000569085 5.571±0.00 14.452±0.00 N/A 3.573±0.00 11.974±0.00 3.651±0.00 2.614±0.00 5.603±4.63 N/A 13.606±0.00 N/A 8.899±0.00 N/A 6.437±0.00
ENST00000569888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135740 ENST00000299798 N/A N/A N/A 1.124±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564704 N/A 1.736±0.00 N/A 0.842±0.00 N/A N/A 0.514±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000564812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.206±0.00
ENST00000566345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.615±0.00
ENST00000566638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168676 ENST00000304372 N/A N/A N/A 0.030±0.00 N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A 21.298±8.24
ENST00000561625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566295 N/A N/A N/A N/A N/A N/A N/A N/A 0.218±0.00 N/A N/A N/A N/A N/A
ENST00000566392 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.254±0.00 N/A N/A N/A N/A
ENST00000567976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569333 N/A N/A N/A 0.098±0.00 N/A N/A 0.056±0.00 N/A 0.020±0.00 0.086±0.00 0.082±0.00 N/A N/A 5.755±3.29
ENST00000570049 N/A N/A N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A
ENSG00000196155 ENST00000360461 N/A N/A N/A N/A 0.284±0.00 N/A N/A N/A N/A 0.082±0.00 N/A N/A N/A N/A
ENST00000379344 0.218±0.00 N/A N/A 0.677±0.00 1.110±0.00 N/A 0.125±0.00 0.419±0.00 N/A 0.094±0.00 N/A 1.550±0.41 N/A 18.962±0.00
ENST00000393966 N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000427155 0.215±0.00 N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A 4.259±2.23 2.240±1.11 7.343±0.00
ENST00000450733 0.305±0.00 0.311±0.00 N/A 0.029±0.00 0.709±0.00 0.314±0.00 0.007±0.00 N/A N/A 0.340±0.00 0.076±0.00 1.809±0.58 0.457±0.00 N/A
ENST00000562144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562289 N/A 1.400±0.00 N/A 0.421±0.00 N/A 0.535±0.02 0.248±0.00 1.004±0.00 0.274±0.00 0.362±0.00 N/A N/A N/A N/A
ENST00000562744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563969 N/A N/A N/A N/A N/A N/A N/A N/A 0.099±0.00 N/A N/A N/A N/A N/A
ENST00000565773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569875 N/A N/A N/A 0.709±0.00 N/A N/A N/A N/A N/A N/A 1.943±0.00 N/A N/A N/A
ENSG00000262691 ENST00000573063 N/A N/A N/A 0.535±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.628±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014782 ENSMUST00000014927 0.191±0.12 0.077±0.00 0.057±0.00 1.775±1.18 0.152±0.06 0.138±0.10 0.052±0.00 N/A 0.023±0.01 0.122±0.00 0.061±0.01 19.712±8.52 0.273±0.19 N/A
ENSMUST00000159286 0.095±0.00 0.102±0.00 N/A 0.249±0.00 N/A 0.064±0.00 N/A 0.024±0.00 0.007±0.00 0.037±0.00 0.038±0.00 4.120±1.48 0.060±0.00 N/A
ENSMUST00000160191 N/A 0.185±0.10 N/A N/A 0.170±0.09 0.073±0.00 0.032±0.00 0.050±0.01 N/A 0.042±0.00 0.028±0.00 5.123±0.00 0.272±0.00 N/A
ENSMUST00000160650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161672 N/A N/A 0.124±0.00 1.297±0.35 0.442±0.00 N/A 0.041±0.00 0.036±0.00 0.037±0.01 N/A 0.067±0.01 12.147±2.51 0.201±0.01 N/A
ENSMUSG00000014786 ENSMUST00000073149 0.692±0.13 0.778±0.13 0.855±0.43 13.029±7.12 0.926±0.27 1.289±0.07 0.160±0.06 0.313±0.10 0.151±0.10 1.326±0.61 0.560±0.18 0.421±0.11 2.271±1.11 10.380±4.10
ENSMUSG00000051648 ENSMUST00000063071 0.208±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.195±0.00 N/A N/A N/A 21.453±1.31
ENSMUST00000167294 0.231±0.12 0.078±0.03 N/A N/A 0.130±0.04 N/A 0.041±0.01 0.037±0.01 0.008±0.00 0.162±0.02 0.042±0.02 N/A N/A 69.426±12.80
ENSMUST00000168196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.181±0.00 N/A N/A N/A
ENSMUST00000168888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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