C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005K9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000110713-ENSG00000148985 CGP 9606 11:3671083-3826371
GeneTranscriptPositionBiotype
ENSG00000110713 (NUP98)
nucleoporin 98kDa 		ENST00000324932 (NUP98-001) 3675010-3797792 protein_coding
ENST00000355260 (NUP98-013) 3675799-3797458 protein_coding
ENST00000359171 (NUP98-201) 3675011-3797792 protein_coding
ENST00000397004 (NUP98-002) 3711553-3797541 protein_coding
ENST00000397007 (NUP98-004) 3711835-3797547 protein_coding
ENST00000397013 (NUP98-018) 3731483-3768680 nonsense_mediated_decay
ENST00000429801 (NUP98-003) 3675878-3706535 protein_coding
ENST00000461047 (NUP98-006) 3760141-3762960 retained_intron
ENST00000469881 (NUP98-009) 3676017-3679768 retained_intron
ENST00000482690 (NUP98-010) 3676269-3676710 retained_intron
ENST00000483285 (NUP98-007) 3699009-3700814 retained_intron
ENST00000488828 (NUP98-008) 3695471-3697260 processed_transcript
ENST00000524563 (NUP98-014) 3679638-3695558 nonsense_mediated_decay
ENST00000527104 (NUP98-019) 3725103-3760594 protein_coding
ENST00000529063 (NUP98-015) 3695519-3702651 nonsense_mediated_decay
ENST00000529379 (NUP98-017) 3731390-3762933 protein_coding
ENST00000530345 (NUP98-011) 3693057-3695565 retained_intron
ENST00000530516 (NUP98-016) 3719488-3721039 retained_intron
ENST00000532475 (NUP98-012) 3775894-3797552 protein_coding
ENST00000533346 (NUP98-020) 3671083-3679687 protein_coding
ENSG00000251934 (RNU6-1143P)
RNA, U6 small nuclear 1143, pseudogene 		ENST00000516125 (RNU6-1143P-201) 3714772-3714875 snRNA
CIL_0005K9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063550-ENSMUSG00000030990 CGP 10090 7:102134204-102238567
GeneTranscriptPositionBiotype
ENSMUSG00000030990 (Pgap2)
post-GPI attachment to proteins 2 		ENSMUST00000033292 (Pgap2-003) 102223069-102237763 protein_coding
ENSMUST00000119816 (Pgap2-024) 102223085-102237733 nonsense_mediated_decay
ENSMUST00000120119 (Pgap2-007) 102229999-102238560 protein_coding
ENSMUST00000120879 (Pgap2-029) 102210362-102238567 protein_coding
ENSMUST00000124619 (Pgap2-004) 102223071-102227111 retained_intron
ENSMUST00000126914 (Pgap2-016) 102223053-102236233 protein_coding
ENSMUST00000127804 (Pgap2-011) 102210535-102236461 retained_intron
ENSMUST00000129340 (Pgap2-006) 102223050-102237777 nonsense_mediated_decay
ENSMUST00000133311 (Pgap2-028) 102223072-102237662 processed_transcript
ENSMUST00000134621 (Pgap2-025) 102235903-102237654 retained_intron
ENSMUST00000137303 (Pgap2-027) 102235854-102237530 protein_coding
ENSMUST00000138479 (Pgap2-014) 102223045-102237226 protein_coding
ENSMUST00000138753 (Pgap2-020) 102223282-102236298 protein_coding
ENSMUST00000140058 (Pgap2-022) 102225831-102237552 nonsense_mediated_decay
ENSMUST00000140631 (Pgap2-030) 102210335-102226385 protein_coding
ENSMUST00000142873 (Pgap2-021) 102225818-102236335 protein_coding
ENSMUST00000143541 (Pgap2-012) 102222440-102236167 protein_coding
ENSMUST00000143759 (Pgap2-018) 102223078-102236418 retained_intron
ENSMUST00000145352 (Pgap2-023) 102223084-102237620 nonsense_mediated_decay
ENSMUST00000146394 (Pgap2-009) 102210524-102221046 processed_transcript
ENSMUST00000146559 (Pgap2-017) 102223075-102226354 protein_coding
ENSMUST00000146996 (Pgap2-010) 102210372-102226445 protein_coding
ENSMUST00000147536 (Pgap2-008) 102210208-102223483 processed_transcript
ENSMUST00000150891 (Pgap2-005) 102223093-102238560 processed_transcript
ENSMUST00000153020 (Pgap2-013) 102222644-102237228 protein_coding
ENSMUST00000156529 (Pgap2-002) 102223028-102238567 protein_coding
ENSMUSG00000063550 (Nup98)
nucleoporin 98 		ENSMUST00000070165 (Nup98-201) 102134204-102210120 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005K9_0001ENSG00000110713ENST00000324932ENST00000355260ENST00000359171ENST00000397004ENST00000397007ENST00000397013ENST00000429801ENST00000461047ENST00000469881ENST00000482690ENST00000483285ENST00000488828ENST00000524563ENST00000527104ENST00000529063ENST00000529379ENST00000530345ENST00000530516ENST00000532475ENST00000533346ENSG00000251934ENST00000516125CIL_0005K9_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005K9_0001ENSG00000110713ENST00000324932ENST00000355260ENST00000359171ENST00000397004ENST00000397007ENST00000429801ENSG00000251934ENST00000516125CIL_0005K9_0002ENSMUSG00000030990ENSMUST00000033292ENSMUST00000120119ENSMUST00000120879ENSMUST00000124619ENSMUST00000126914ENSMUST00000133311ENSMUST00000137303ENSMUST00000138479ENSMUST00000142873ENSMUST00000143759ENSMUST00000150891ENSMUST00000153020ENSMUST00000156529ENSMUSG00000063550ENSMUST00000070165
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110713 ENST00000324932 11.998±0.00 N/A 1.299±0.00 1.544±0.00 4.234±0.84 4.294±0.49 2.906±2.25 6.060±4.02 2.497±0.52 5.355±2.85 1.496±0.00 10.126±5.25 5.508±1.01 26.653±3.08
ENST00000355260 N/A N/A 1.233±0.00 N/A 1.735±0.00 1.226±0.00 0.587±0.00 N/A 1.828±0.00 N/A N/A N/A N/A 10.789±1.11
ENST00000359171 N/A N/A N/A 1.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397004 N/A N/A N/A N/A 4.144±0.00 N/A 0.765±0.00 N/A 2.225±0.00 N/A 2.383±0.00 7.470±0.00 N/A N/A
ENST00000397007 N/A 6.970±0.00 1.195±0.00 2.243±0.96 3.571±0.00 3.100±0.10 3.018±1.71 2.776±0.00 2.310±0.77 4.272±0.00 10.893±0.00 8.141±4.62 6.082±0.39 16.189±0.00
ENST00000397013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429801 N/A N/A N/A N/A N/A N/A N/A N/A 2.833±0.00 N/A N/A N/A N/A 25.911±0.00
ENST00000461047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251934 ENST00000516125 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.835±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030990 ENSMUST00000033292 17.334±3.86 23.283±5.37 8.337±0.95 N/A 15.346±3.34 22.769±5.78 10.883±1.43 6.967±2.57 6.335±1.48 18.714±2.94 3.985±0.82 18.512±3.47 N/A N/A
ENSMUST00000119816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000120119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.966±1.42 N/A N/A
ENSMUST00000120879 5.135±0.60 N/A 4.467±0.71 8.148±0.00 6.007±0.00 N/A 6.049±0.00 3.946±0.96 3.151±0.68 9.875±1.66 2.693±0.81 N/A 2.194±0.24 N/A
ENSMUST00000124619 N/A N/A N/A 0.590±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126914 N/A 42.733±6.79 N/A N/A N/A 15.582±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133311 N/A N/A N/A N/A 15.366±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137303 17.729±0.52 42.087±2.32 N/A N/A 27.000±3.54 37.860±11.53 16.002±1.26 9.901±0.96 11.480±0.00 31.321±0.00 N/A 35.731±5.86 N/A N/A
ENSMUST00000138479 N/A 38.107±5.58 N/A N/A 15.469±0.87 29.988±6.82 14.115±0.00 6.471±0.69 7.624±1.11 25.650±4.11 N/A 24.290±6.61 N/A N/A
ENSMUST00000138753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 46.793±5.17 N/A N/A
ENSMUST00000143541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143759 N/A N/A N/A N/A N/A 44.093±0.00 N/A N/A 9.740±0.00 N/A N/A 28.634±7.04 N/A N/A
ENSMUST00000145352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150891 N/A N/A 5.863±0.44 N/A 4.584±0.00 N/A N/A N/A 2.651±0.00 N/A 4.198±1.10 15.857±0.00 4.323±0.05 N/A
ENSMUST00000153020 N/A N/A N/A N/A 16.498±0.00 N/A N/A N/A 12.723±0.08 N/A N/A 29.378±6.18 N/A N/A
ENSMUST00000156529 4.501±0.00 16.588±3.04 4.115±0.70 N/A 7.190±0.00 9.178±1.48 6.494±3.08 3.053±0.55 4.643±1.37 N/A N/A N/A 2.899±0.00 N/A
ENSMUSG00000063550 ENSMUST00000070165 4.445±1.29 5.786±0.86 N/A N/A 2.921±1.43 2.353±1.55 1.836±0.43 2.787±2.21 1.333±0.88 8.366±0.00 0.567±0.00 5.330±2.14 2.662±0.53 N/A

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