C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005KM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164134-ENSG00000172007 CGP 9606 4:139301455-139476609
GeneTranscriptPositionBiotype
ENSG00000109390 (NDUFC1)
NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa 		ENST00000394223 (NDUFC1-004) 139290031-139302479 protein_coding
ENST00000394225 (NDUFC1-005) 139289953-139302526 processed_transcript
ENST00000394228 (NDUFC1-001) 139289917-139302551 protein_coding
ENST00000503453 (NDUFC1-009) 139289953-139301420 processed_transcript
ENST00000503997 (NDUFC1-002) 139266880-139295815 nonsense_mediated_decay
ENST00000505036 (NDUFC1-003) 139289938-139301204 protein_coding
ENST00000507764 (NDUFC1-007) 139295732-139301210 processed_transcript
ENST00000513022 (NDUFC1-006) 139295118-139301233 processed_transcript
ENST00000539002 (NDUFC1-201) 139289917-139301210 protein_coding
ENST00000539387 (NDUFC1-202) 139289917-139302551 protein_coding
ENST00000544855 (NDUFC1-203) 139289917-139301210 protein_coding
ENSG00000164134 (NAA15)
N(alpha)-acetyltransferase 15, NatA auxiliary subunit 		ENST00000296543 (NAA15-001) 139301455-139391382 protein_coding
ENST00000398947 (NAA15-002) 139301588-139391368 protein_coding
ENST00000468029 (NAA15-005) 139351535-139359857 processed_transcript
ENST00000480277 (NAA15-010) 139336873-139351613 processed_transcript
ENST00000482087 (NAA15-004) 139301984-139341073 processed_transcript
ENST00000485905 (NAA15-007) 139384836-139386547 retained_intron
ENST00000496716 (NAA15-006) 139376377-139379335 retained_intron
ENST00000515576 (NAA15-003) 139386168-139420033 protein_coding
ENSG00000172007 (RAB33B)
RAB33B, member RAS oncogene family 		ENST00000305626 (RAB33B-001) 139453807-139476609 protein_coding
ENST00000507271 (RAB33B-002) 139453232-139454285 processed_transcript
ENSG00000239005 (ACA64)
Small nucleolar RNA ACA64 		ENST00000459613 (ACA64.1-203) 139436368-139436494 snoRNA
ENSG00000248863 (RP11-83A24.1)
 ENST00000512815 (RP11-83A24.1-001) 139426843-139430884 transcribed_processed_pseudogene
ENST00000602907 (RP11-83A24.1-002) 139426299-139427295 processed_transcript
CIL_0005KM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063273-ENSMUSG00000027739 CGP 10090 3:51416016-51495905
GeneTranscriptPositionBiotype
ENSMUSG00000027739 (Rab33b)
RAB33B, member RAS oncogene family 		ENSMUST00000054387 (Rab33b-001) 51483966-51495905 protein_coding
ENSMUSG00000063273 (Naa15)
N(alpha)-acetyltransferase 15, NatA auxiliary subunit 		ENSMUST00000029303 (Naa15-201) 51416016-51475985 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005KM_0001ENSG00000109390ENST00000394223ENST00000394225ENST00000394228ENST00000503453ENST00000503997ENST00000505036ENST00000507764ENST00000513022ENST00000539002ENST00000539387ENST00000544855ENSG00000164134ENST00000296543ENST00000398947ENST00000468029ENST00000480277ENST00000482087ENST00000485905ENST00000496716ENST00000515576ENSG00000172007ENST00000305626ENST00000507271ENSG00000239005ENST00000459613ENSG00000248863ENST00000512815ENST00000602907CIL_0005KM_0002ENSMUSG00000027739ENSMUST00000054387ENSMUSG00000063273ENSMUST00000029303
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005KM_0001ENSG00000109390ENST00000394223ENST00000394225ENST00000503453ENST00000505036ENST00000507764ENST00000539002ENST00000539387ENSG00000164134ENST00000296543ENST00000398947ENST00000480277ENSG00000172007ENST00000305626ENSG00000239005ENST00000459613ENSG00000248863ENST00000512815ENST00000602907CIL_0005KM_0002ENSMUSG00000027739ENSMUST00000054387ENSMUSG00000063273ENSMUST00000029303
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109390 ENST00000394223 N/A N/A 3.900±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 62.853±0.00 41.401±0.00 112.458±0.00
ENST00000394225 4.363±0.00 4.439±0.00 N/A 8.120±0.00 N/A 2.856±0.00 2.717±0.00 N/A N/A N/A N/A 24.593±0.00 N/A N/A
ENST00000394228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503453 11.717±0.00 18.271±0.00 N/A 23.723±0.00 14.355±0.00 16.192±13.46 81.468±0.00 28.648±23.21 37.269±0.00 26.643±0.00 23.781±16.53 38.592±8.09 23.957±3.90 41.281±0.00
ENST00000503997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505036 N/A N/A N/A 1.913±0.00 1.742±0.87 N/A 1.739±0.00 N/A N/A 4.701±0.00 9.681±0.00 N/A N/A 23.909±0.00
ENST00000507764 1.740±0.00 N/A N/A 7.548±0.00 3.062±0.00 6.336±0.00 N/A 8.781±0.00 N/A N/A N/A 1.519±0.00 N/A N/A
ENST00000513022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539002 N/A N/A 1.543±0.00 2.643±0.00 0.675±0.00 0.711±0.00 10.842±4.78 2.697±0.00 1.538±0.00 1.657±0.00 3.537±0.52 N/A N/A N/A
ENST00000539387 N/A N/A N/A N/A N/A N/A N/A N/A 2.893±0.00 N/A N/A N/A 13.774±3.86 N/A
ENST00000544855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164134 ENST00000296543 3.081±0.00 2.890±0.00 N/A 2.799±0.00 3.365±0.30 4.417±0.00 1.809±0.00 N/A 2.174±0.49 2.783±0.83 1.420±0.00 5.372±1.31 2.325±1.33 7.971±0.96
ENST00000398947 1.064±0.00 N/A 1.013±0.00 1.618±0.00 1.308±0.41 3.159±0.00 1.833±0.00 2.839±1.40 N/A 1.396±0.50 4.448±0.00 3.319±0.00 1.592±0.73 2.678±0.00
ENST00000468029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480277 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.920±0.00 N/A N/A N/A N/A
ENST00000482087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172007 ENST00000305626 N/A 2.213±0.00 N/A 2.620±0.13 3.410±0.00 2.478±0.00 1.734±0.00 N/A 2.352±0.00 3.022±0.00 N/A 3.040±0.00 1.783±0.41 N/A
ENST00000507271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239005 ENST00000459613 N/A 0.719±0.00 N/A 0.489±0.00 N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000248863 ENST00000512815 0.026±0.00 0.194±0.00 N/A N/A 0.031±0.00 N/A 0.079±0.00 0.274±0.00 0.554±0.00 0.173±0.00 0.147±0.00 N/A N/A N/A
ENST00000602907 N/A 0.064±0.00 N/A N/A N/A 0.143±0.10 0.025±0.01 0.037±0.00 0.095±0.00 0.201±0.00 N/A 0.055±0.00 N/A 0.124±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027739 ENSMUST00000054387 6.214±1.00 8.093±0.99 12.798±1.17 4.853±1.47 7.299±2.77 7.073±1.06 2.345±0.17 4.787±0.40 2.378±0.34 10.949±0.70 2.133±0.14 7.924±2.89 6.593±2.13 2.440±1.01
ENSMUSG00000063273 ENSMUST00000029303 3.512±0.56 2.049±0.40 9.259±0.31 10.997±1.47 2.662±0.48 1.840±0.55 3.518±0.45 2.369±0.42 6.668±4.80 2.278±0.60 5.967±1.68 4.897±3.64 16.190±7.15 7.242±1.61

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