C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005KR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115271-ENSG00000184611 CGP 9606 2:162318840-162838730
GeneTranscriptPositionBiotype
ENSG00000115271 (GCA)
grancalcin, EF-hand calcium binding protein
ENST00000233612 (GCA-003) 162344338-162361122 protein_coding
ENST00000414723 (GCA-010) 162356438-162371595 protein_coding
ENST00000429691 (GCA-012) 162319034-162361098 protein_coding
ENST00000437150 (GCA-001) 162344088-162361420 protein_coding
ENST00000446271 (GCA-011) 162318884-162356813 protein_coding
ENST00000453113 (GCA-014) 162344135-162356905 protein_coding
ENST00000473240 (GCA-013) 162318840-162356834 processed_transcript
ENST00000479199 (GCA-007) 162344182-162356981 retained_intron
ENST00000481161 (GCA-006) 162344134-162356665 retained_intron
ENST00000487445 (GCA-008) 162344159-162360971 retained_intron
ENSG00000237750 (AC007740.1)
ENST00000446838 (AC007740.1-001) 162768936-162797972 antisense
CIL_0005KR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026893-ENSMUSG00000059742 CGP 10090 2:62664285-63184287
GeneTranscriptPositionBiotype
ENSMUSG00000026893 (Gca)
grancalcin
ENSMUST00000028257 (Gca-001) 62664285-62694109 protein_coding
ENSMUST00000148083 (Gca-002) 62686198-62690431 processed_transcript
ENSMUSG00000059742 (Kcnh7)
potassium voltage-gated channel, subfamily H (eag-related), member 7
ENSMUST00000075052 (Kcnh7-001) 62693414-63184278 protein_coding
ENSMUST00000112452 (Kcnh7-003) 62786367-63184170 protein_coding
ENSMUST00000112454 (Kcnh7-002) 62786281-63184287 protein_coding
ENSMUST00000131799 (Kcnh7-004) 63181469-63184262 processed_transcript
ENSMUSG00000081817 (Gm13590)
predicted gene 13590
ENSMUST00000120183 (Gm13590-001) 62668783-62670370 processed_pseudogene
ENSMUSG00000085029 (Gm13569)
predicted gene 13569
ENSMUST00000137221 (Gm13569-001) 62809187-62810698 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005KR_0001ENSG00000115271ENST00000233612ENST00000414723ENST00000429691ENST00000437150ENST00000446271ENST00000453113ENST00000473240ENST00000479199ENST00000481161ENST00000487445ENSG00000237750ENST00000446838CIL_0005KR_0002ENSMUSG00000026893ENSMUST00000028257ENSMUST00000148083ENSMUSG00000059742ENSMUST00000075052ENSMUST00000112452ENSMUST00000112454ENSMUST00000131799ENSMUSG00000081817ENSMUST00000120183ENSMUSG00000085029ENSMUST00000137221
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005KR_0001ENSG00000115271ENST00000233612ENST00000414723ENST00000429691ENST00000437150ENST00000453113ENST00000479199ENST00000481161ENST00000487445ENSG00000237750ENST00000446838CIL_0005KR_0002ENSMUSG00000026893ENSMUST00000028257ENSMUST00000148083ENSMUSG00000059742ENSMUST00000075052ENSMUSG00000081817ENSMUST00000120183ENSMUSG00000085029ENSMUST00000137221
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115271 ENST00000233612 7.842±0.00 6.773±0.00 N/A 5.695±0.00 2.363±0.00 2.329±0.00 1.500±0.00 3.391±1.93 2.574±0.00 4.885±2.71 0.647±0.00 3.245±1.52 4.328±1.26 6.157±0.34
ENST00000414723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.025±0.00
ENST00000429691 N/A N/A 1.476±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437150 2.565±0.00 2.652±0.00 0.554±0.00 4.213±1.68 1.980±0.07 1.122±0.00 1.039±0.48 3.272±0.00 0.847±0.18 3.862±0.39 N/A 1.975±0.55 3.139±0.23 2.563±0.00
ENST00000446271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453113 N/A N/A N/A N/A 3.220±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479199 N/A N/A 3.850±0.00 16.989±0.00 N/A 4.943±0.00 N/A 7.550±0.00 N/A 19.318±0.00 1.161±0.72 9.947±3.34 7.467±3.58 N/A
ENST00000481161 N/A N/A N/A N/A N/A N/A 0.778±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000487445 N/A 1.735±0.00 N/A 1.869±0.00 N/A N/A N/A 1.156±0.00 0.553±0.02 N/A N/A N/A N/A N/A
ENSG00000237750 ENST00000446838 N/A N/A N/A 0.261±0.00 N/A N/A 0.007±0.00 0.015±0.00 N/A N/A 0.058±0.00 N/A N/A 0.653±0.40
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026893 ENSMUST00000028257 2.023±0.33 3.696±0.77 0.937±0.32 2.725±0.09 2.711±0.87 3.677±1.07 3.642±1.54 4.333±1.07 2.842±1.83 3.581±0.56 0.581±0.07 3.422±1.70 3.635±0.66 5.524±2.79
ENSMUST00000148083 5.787±0.00 3.766±0.00 N/A N/A 6.851±0.17 11.681±0.00 N/A 8.114±0.52 3.773±0.00 N/A N/A 5.504±0.00 N/A N/A
ENSMUSG00000059742 ENSMUST00000075052 0.091±0.00 N/A N/A 0.878±0.50 0.106±0.00 0.169±0.00 0.153±0.00 0.203±0.03 0.088±0.01 0.193±0.03 0.100±0.02 0.138±0.03 N/A N/A
ENSMUST00000112452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081817 ENSMUST00000120183 0.052±0.02 N/A 0.021±0.02 0.051±0.00 N/A N/A 0.035±0.01 0.051±0.02 0.026±0.01 N/A 0.018±0.00 0.037±0.01 0.035±0.01 0.048±0.03
ENSMUSG00000085029 ENSMUST00000137221 N/A 0.376±0.06 N/A 0.568±0.40 0.129±0.02 N/A 0.058±0.00 0.072±0.00 0.146±0.00 N/A N/A 0.243±0.17 0.029±0.02 0.172±0.11

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