C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005KS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000184611-ENSG00000182263 CGP 9606 2:162371407-163736012
GeneTranscriptPositionBiotype
ENSG00000115271 (GCA)
grancalcin, EF-hand calcium binding protein 		ENST00000233612 (GCA-003) 162344338-162361122 protein_coding
ENST00000414723 (GCA-010) 162356438-162371595 protein_coding
ENST00000429691 (GCA-012) 162319034-162361098 protein_coding
ENST00000437150 (GCA-001) 162344088-162361420 protein_coding
ENST00000446271 (GCA-011) 162318884-162356813 protein_coding
ENST00000453113 (GCA-014) 162344135-162356905 protein_coding
ENST00000473240 (GCA-013) 162318840-162356834 processed_transcript
ENST00000479199 (GCA-007) 162344182-162356981 retained_intron
ENST00000481161 (GCA-006) 162344134-162356665 retained_intron
ENST00000487445 (GCA-008) 162344159-162360971 retained_intron
ENSG00000182263 (FIGN)
fidgetin 		ENST00000333129 (FIGN-001) 163602611-163736007 protein_coding
ENST00000409634 (FIGN-004) 163593396-163736012 protein_coding
ENST00000482917 (FIGN-003) 163611354-163735984 processed_transcript
ENSG00000230282 (RPL7P61)
ribosomal protein L7 pseudogene 61 		ENST00000451721 (RPL7P61-001) 163152251-163153307 processed_pseudogene
ENSG00000237750 (AC007740.1)
 ENST00000446838 (AC007740.1-001) 162768936-162797972 antisense
ENSG00000274608 (AC104697.1)
 ENST00000617160 (AC104697.1-201) 163090999-163091099 miRNA
CIL_0005KS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059742-ENSMUSG00000075324 CGP 10090 2:62693414-64098038
GeneTranscriptPositionBiotype
ENSMUSG00000026893 (Gca)
grancalcin 		ENSMUST00000028257 (Gca-001) 62664285-62694109 protein_coding
ENSMUST00000148083 (Gca-002) 62686198-62690431 processed_transcript
ENSMUSG00000059742 (Kcnh7)
potassium voltage-gated channel, subfamily H (eag-related), member 7 		ENSMUST00000075052 (Kcnh7-001) 62693414-63184278 protein_coding
ENSMUST00000112452 (Kcnh7-003) 62786367-63184170 protein_coding
ENSMUST00000112454 (Kcnh7-002) 62786281-63184287 protein_coding
ENSMUST00000131799 (Kcnh7-004) 63181469-63184262 processed_transcript
ENSMUSG00000075324 (Fign)
fidgetin 		ENSMUST00000102728 (Fign-002) 63977337-64098038 nonsense_mediated_decay
ENSMUST00000126042 (Fign-004) 63980447-64097988 processed_transcript
ENSMUST00000131615 (Fign-001) 63971507-64098012 protein_coding
ENSMUST00000153538 (Fign-003) 63980616-64098010 processed_transcript
ENSMUSG00000085029 (Gm13569)
predicted gene 13569 		ENSMUST00000137221 (Gm13569-001) 62809187-62810698 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005KS_0001ENSG00000115271ENST00000233612ENST00000414723ENST00000429691ENST00000437150ENST00000446271ENST00000453113ENST00000473240ENST00000479199ENST00000481161ENST00000487445ENSG00000182263ENST00000333129ENST00000409634ENST00000482917ENSG00000230282ENST00000451721ENSG00000237750ENST00000446838ENSG00000274608ENST00000617160CIL_0005KS_0002ENSMUSG00000026893ENSMUST00000028257ENSMUST00000148083ENSMUSG00000059742ENSMUST00000075052ENSMUST00000112452ENSMUST00000112454ENSMUST00000131799ENSMUSG00000075324ENSMUST00000102728ENSMUST00000126042ENSMUST00000131615ENSMUST00000153538ENSMUSG00000085029ENSMUST00000137221
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005KS_0001ENSG00000115271ENST00000233612ENST00000414723ENST00000429691ENST00000437150ENST00000453113ENST00000479199ENST00000481161ENST00000487445ENSG00000182263ENST00000333129ENSG00000230282ENST00000451721ENSG00000237750ENST00000446838ENSG00000274608ENST00000617160CIL_0005KS_0002ENSMUSG00000026893ENSMUST00000028257ENSMUST00000148083ENSMUSG00000059742ENSMUST00000075052ENSMUSG00000075324ENSMUST00000102728ENSMUST00000126042ENSMUST00000131615ENSMUST00000153538ENSMUSG00000085029ENSMUST00000137221
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115271 ENST00000233612 7.842±0.00 6.773±0.00 N/A 5.695±0.00 2.363±0.00 2.329±0.00 1.500±0.00 3.391±1.93 2.574±0.00 4.885±2.71 0.647±0.00 3.245±1.52 4.328±1.26 6.157±0.34
ENST00000414723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.025±0.00
ENST00000429691 N/A N/A 1.476±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437150 2.565±0.00 2.652±0.00 0.554±0.00 4.213±1.68 1.980±0.07 1.122±0.00 1.039±0.48 3.272±0.00 0.847±0.18 3.862±0.39 N/A 1.975±0.55 3.139±0.23 2.563±0.00
ENST00000446271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453113 N/A N/A N/A N/A 3.220±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479199 N/A N/A 3.850±0.00 16.989±0.00 N/A 4.943±0.00 N/A 7.550±0.00 N/A 19.318±0.00 1.161±0.72 9.947±3.34 7.467±3.58 N/A
ENST00000481161 N/A N/A N/A N/A N/A N/A 0.778±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000487445 N/A 1.735±0.00 N/A 1.869±0.00 N/A N/A N/A 1.156±0.00 0.553±0.02 N/A N/A N/A N/A N/A
ENSG00000182263 ENST00000333129 N/A N/A N/A 0.375±0.19 0.936±0.00 N/A 0.346±0.15 0.730±0.19 0.166±0.00 0.176±0.00 0.127±0.00 0.401±0.20 0.224±0.09 0.420±0.29
ENST00000409634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230282 ENST00000451721 0.015±0.00 0.031±0.00 N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 0.014±0.00 N/A N/A 0.014±0.00
ENSG00000237750 ENST00000446838 N/A N/A N/A 0.261±0.00 N/A N/A 0.007±0.00 0.015±0.00 N/A N/A 0.058±0.00 N/A N/A 0.653±0.40
ENSG00000274608 ENST00000617160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.788±0.00 N/A 1.684±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026893 ENSMUST00000028257 2.023±0.33 3.696±0.77 0.937±0.32 2.725±0.09 2.711±0.87 3.677±1.07 3.642±1.54 4.333±1.07 2.842±1.83 3.581±0.56 0.581±0.07 3.422±1.70 3.635±0.66 5.524±2.79
ENSMUST00000148083 5.787±0.00 3.766±0.00 N/A N/A 6.851±0.17 11.681±0.00 N/A 8.114±0.52 3.773±0.00 N/A N/A 5.504±0.00 N/A N/A
ENSMUSG00000059742 ENSMUST00000075052 0.091±0.00 N/A N/A 0.878±0.50 0.106±0.00 0.169±0.00 0.153±0.00 0.203±0.03 0.088±0.01 0.193±0.03 0.100±0.02 0.138±0.03 N/A N/A
ENSMUST00000112452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000075324 ENSMUST00000102728 0.478±0.11 0.884±0.12 0.531±0.00 N/A 0.429±0.12 0.208±0.13 0.668±0.05 0.626±0.26 0.503±0.18 0.804±0.25 0.080±0.02 0.669±0.31 0.059±0.04 0.037±0.02
ENSMUST00000126042 N/A N/A N/A N/A N/A 0.587±0.00 N/A N/A N/A N/A 0.520±0.00 N/A N/A N/A
ENSMUST00000131615 N/A 0.664±0.14 0.351±0.17 1.917±0.67 0.321±0.03 0.131±0.03 0.814±0.36 0.443±0.12 0.380±0.24 0.488±0.31 0.086±0.04 0.488±0.34 0.135±0.11 0.025±0.00
ENSMUST00000153538 N/A N/A N/A N/A N/A 0.656±0.00 N/A N/A N/A N/A N/A N/A 0.128±0.00 N/A
ENSMUSG00000085029 ENSMUST00000137221 N/A 0.376±0.06 N/A 0.568±0.40 0.129±0.02 N/A 0.058±0.00 0.072±0.00 0.146±0.00 N/A N/A 0.243±0.17 0.029±0.02 0.172±0.11

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