C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0005LD_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000002967-ENSDARG00000017084 | CGP | 7955 | 3:40272486-40282623  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000002967  (pdap1b)pdgfa associated protein 1b |
ENSDART00000018626 (pdap1b-001)
|
40272486-40279526 | protein_coding | |
|
ENSDARG00000017084 (bud31) BUD31 homolog (yeast) |
ENSDART00000009411 (bud31-001)
|
40279380-40282623 | protein_coding | |
| CIL_0005LD_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000106244-ENSG00000106245 | CGP | 9606 | 7:99392048-99419616 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000106244 (PDAP1) PDGFA associated protein 1 |
ENST00000350498 (PDAP1-001)
|
99394963-99408829 | protein_coding | |
|
ENST00000426447 (PDAP1-002)
|
99396523-99408590 | nonsense_mediated_decay | ||
|
ENST00000488214 (PDAP1-003)
|
99403317-99404942 | retained_intron | ||
|
ENST00000496335 (PDAP1-004)
|
99392048-99397960 | processed_transcript | ||
|
ENSG00000106245 (BUD31) BUD31 homolog (S. cerevisiae) |
ENST00000222969 (BUD31-001)
|
99408978-99419608 | protein_coding | |
|
ENST00000403633 (BUD31-002)
|
99408641-99419616 | protein_coding | ||
|
ENST00000427499 (BUD31-006)
|
99408672-99416200 | nonsense_mediated_decay | ||
|
ENST00000431419 (BUD31-005)
|
99415136-99419577 | protein_coding | ||
|
ENST00000456893 (BUD31-003)
|
99411057-99419612 | protein_coding | ||
|
ENST00000466798 (BUD31-004)
|
99416134-99418121 | retained_intron | ||
|
ENST00000471813 (BUD31-008)
|
99410114-99416299 | retained_intron | ||
|
ENST00000473447 (BUD31-007)
|
99409085-99411246 | retained_intron | ||
|
ENST00000496696 (BUD31-009)
|
99408969-99417598 | retained_intron | ||
|
ENSG00000130429 (ARPC1B) actin related protein 2/3 complex, subunit 1B, 41kDa |
ENST00000252725 (ARPC1B-001)
|
99374675-99394801 | protein_coding | |
|
ENST00000414376 (ARPC1B-008)
|
99374259-99388175 | protein_coding | ||
|
ENST00000417330 (ARPC1B-014)
|
99374730-99388261 | protein_coding | ||
|
ENST00000418347 (ARPC1B-013)
|
99374729-99388117 | protein_coding | ||
|
ENST00000427217 (ARPC1B-016)
|
99374730-99388267 | protein_coding | ||
|
ENST00000429246 (ARPC1B-009)
|
99374730-99385778 | protein_coding | ||
|
ENST00000431816 (ARPC1B-015)
|
99374730-99388267 | protein_coding | ||
|
ENST00000432343 (ARPC1B-024)
|
99385700-99391027 | nonsense_mediated_decay | ||
|
ENST00000443222 (ARPC1B-007)
|
99374249-99388195 | protein_coding | ||
|
ENST00000445924 (ARPC1B-018)
|
99385700-99391006 | nonsense_mediated_decay | ||
|
ENST00000451682 (ARPC1B-003)
|
99374730-99394776 | protein_coding | ||
|
ENST00000455009 (ARPC1B-012)
|
99374707-99388255 | protein_coding | ||
|
ENST00000458033 (ARPC1B-017)
|
99374730-99388267 | protein_coding | ||
|
ENST00000463078 (ARPC1B-022)
|
99394042-99394801 | processed_transcript | ||
|
ENST00000468337 (ARPC1B-021)
|
99389094-99389983 | retained_intron | ||
|
ENST00000474880 (ARPC1B-020)
|
99385700-99388956 | processed_transcript | ||
|
ENST00000481997 (ARPC1B-005)
|
99390872-99394794 | retained_intron | ||
|
ENST00000484375 (ARPC1B-025)
|
99374707-99391100 | retained_intron | ||
|
ENST00000484600 (ARPC1B-011)
|
99374730-99390029 | retained_intron | ||
|
ENST00000491294 (ARPC1B-006)
|
99391178-99394797 | retained_intron | ||
|
ENST00000493403 (ARPC1B-019)
|
99386369-99388243 | processed_transcript | ||
| CIL_0005LD_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000029623-ENSMUSG00000038722 | CGP | 10090 | 5:145128769-145148078 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000029622 (Arpc1b) actin related protein 2/3 complex, subunit 1B |
ENSMUST00000085679 (Arpc1b-001)
|
145114215-145129699 | protein_coding | |
|
ENSMUST00000126343 (Arpc1b-004)
|
145114301-145124255 | retained_intron | ||
|
ENSMUST00000128229 (Arpc1b-008)
|
145125891-145127330 | retained_intron | ||
|
ENSMUST00000129033 (Arpc1b-003)
|
145114258-145122795 | processed_transcript | ||
|
ENSMUST00000136074 (Arpc1b-006)
|
145123679-145126786 | protein_coding | ||
|
ENSMUST00000138235 (Arpc1b-007)
|
145123974-145125706 | retained_intron | ||
|
ENSMUST00000138900 (Arpc1b-005)
|
145123974-145126932 | processed_transcript | ||
|
ENSMUST00000138922 (Arpc1b-010)
|
145126758-145130705 | protein_coding | ||
|
ENSMUST00000141602 (Arpc1b-002)
|
145114316-145122635 | protein_coding | ||
|
ENSMUST00000144375 (Arpc1b-009)
|
145127223-145128088 | retained_intron | ||
|
ENSMUSG00000029623 (Pdap1) PDGFA associated protein 1 |
ENSMUST00000031627 (Pdap1-001)
|
145128769-145140238 | protein_coding | |
|
ENSMUST00000123111 (Pdap1-002)
|
145130084-145136696 | processed_transcript | ||
|
ENSMUST00000143439 (Pdap1-004)
|
145131371-145135472 | retained_intron | ||
|
ENSMUST00000148781 (Pdap1-003)
|
145136578-145139998 | retained_intron | ||
|
ENSMUSG00000029624 (Ptcd1) pentatricopeptide repeat domain 1 |
ENSMUST00000031628 (Ptcd1-001)
|
145147514-145167108 | protein_coding | |
|
ENSMUST00000161390 (Ptcd1-002)
|
145165448-145166956 | protein_coding | ||
Expression Patterns
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