C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005LM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061451-ENSDARG00000070121 CGP 7955 1:22146588-22173086
GeneTranscriptPositionBiotype
ENSDARG00000061451 (n4bp2)
NEDD4 binding protein 2
ENSDART00000087658 (n4bp2-001) 22146588-22167909 protein_coding
ENSDART00000134113 (n4bp2-002) 22153102-22154304 retained_intron
ENSDARG00000070121 (rhoh)
ras homolog gene family, member H
ENSDART00000102646 (rhoh-001) 22172499-22173086 protein_coding
ENSDART00000156740 (rhoh-201) 22172517-22173080 protein_coding
CIL_0005LM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000078177-ENSG00000168421 CGP 9606 4:40056826-40246967
GeneTranscriptPositionBiotype
ENSG00000078177 (N4BP2)
NEDD4 binding protein 2
ENST00000261435 (N4BP2-001) 40056826-40158252 protein_coding
ENST00000511480 (N4BP2-002) 40056913-40158251 nonsense_mediated_decay
ENST00000513269 (N4BP2-003) 40102907-40155397 protein_coding
ENST00000515550 (N4BP2-004) 40056936-40102606 protein_coding
ENSG00000168421 (RHOH)
ras homolog family member H
ENST00000381799 (RHOH-001) 40196907-40246967 protein_coding
ENST00000503754 (RHOH-002) 40192968-40243257 processed_transcript
ENST00000503941 (RHOH-005) 40193663-40243695 protein_coding
ENST00000503978 (RHOH-015) 40200345-40243252 processed_transcript
ENST00000504638 (RHOH-013) 40197245-40243187 processed_transcript
ENST00000505618 (RHOH-016) 40191053-40243995 protein_coding
ENST00000507851 (RHOH-006) 40192967-40243713 protein_coding
ENST00000508513 (RHOH-004) 40192990-40243434 protein_coding
ENST00000511121 (RHOH-014) 40200344-40243405 protein_coding
ENST00000511967 (RHOH-003) 40193046-40243221 processed_transcript
ENST00000513894 (RHOH-008) 40196995-40243193 processed_transcript
ENST00000514143 (RHOH-012) 40197061-40209669 processed_transcript
ENST00000514839 (RHOH-007) 40196989-40218180 processed_transcript
ENST00000515503 (RHOH-011) 40197058-40243210 processed_transcript
ENST00000515702 (RHOH-009) 40197033-40242801 processed_transcript
ENST00000515718 (RHOH-010) 40197034-40243309 processed_transcript
ENST00000610353 (RHOH-201) 40196907-40244764 protein_coding
ENST00000613272 (RHOH-202) 40192967-40244764 protein_coding
ENST00000614836 (RHOH-203) 40196907-40244764 protein_coding
ENST00000615083 (RHOH-204) 40196907-40244764 protein_coding
ENST00000615577 (RHOH-205) 40192967-40244764 protein_coding
ENST00000617441 (RHOH-206) 40193649-40244764 protein_coding
ENST00000619474 (RHOH-207) 40196907-40244764 protein_coding
ENST00000622175 (RHOH-208) 40196907-40244764 protein_coding
ENSG00000201863 (SNORA51)
Small nucleolar RNA SNORA51
ENST00000364993 (SNORA51.1-204) 40082983-40083106 snoRNA
ENSG00000260296 (RP11-395I6.3)
ENST00000567102 (RP11-395I6.3-001) 40166675-40167831 sense_overlapping
CIL_0005LM_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037795-ENSMUSG00000029204 CGP 10090 5:65763521-65896700
GeneTranscriptPositionBiotype
ENSMUSG00000029204 (Rhoh)
ras homolog gene family, member H
ENSMUST00000031106 (Rhoh-201) 65863569-65896700 protein_coding
ENSMUSG00000037795 (N4bp2)
NEDD4 binding protein 2
ENSMUST00000087264 (N4bp2-201) 65764120-65826650 protein_coding
ENSMUST00000113738 (N4bp2-001) 65763521-65830108 protein_coding
ENSMUST00000127411 (N4bp2-005) 65809731-65815058 retained_intron
ENSMUST00000136674 (N4bp2-006) 65825242-65826874 retained_intron
ENSMUST00000137190 (N4bp2-003) 65763979-65786259 processed_transcript
ENSMUST00000138239 (N4bp2-002) 65764120-65817284 protein_coding
ENSMUST00000138607 (N4bp2-004) 65763979-65775894 retained_intron
ENSMUSG00000072918 (N4bp2os)
NEDD4 binding protein 2, opposite strand
ENSMUST00000131859 (N4bp2os-002) 65760991-65763866 antisense
ENSMUST00000156943 (N4bp2os-001) 65761445-65763357 antisense
ENSMUSG00000089337 (Gm24346)
predicted gene, 24346
ENSMUST00000158712 (Gm24346-201) 65777014-65777207 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005LM_0001ENSDARG00000061451ENSDART00000087658ENSDART00000134113ENSDARG00000070121ENSDART00000102646ENSDART00000156740CIL_0005LM_0002ENSG00000078177ENST00000261435ENST00000511480ENST00000513269ENST00000515550ENSG00000168421ENST00000381799ENST00000503754ENST00000503941ENST00000503978ENST00000504638ENST00000505618ENST00000507851ENST00000508513ENST00000511121ENST00000511967ENST00000513894ENST00000514143ENST00000514839ENST00000515503ENST00000515702ENST00000515718ENST00000610353ENST00000613272ENST00000614836ENST00000615083ENST00000615577ENST00000617441ENST00000619474ENST00000622175ENSG00000201863ENST00000364993ENSG00000260296ENST00000567102CIL_0005LM_0003ENSMUSG00000029204ENSMUST00000031106ENSMUSG00000037795ENSMUST00000087264ENSMUST00000113738ENSMUST00000127411ENSMUST00000136674ENSMUST00000137190ENSMUST00000138239ENSMUST00000138607ENSMUSG00000072918ENSMUST00000131859ENSMUST00000156943ENSMUSG00000089337ENSMUST00000158712
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005LM_0001ENSDARG00000061451ENSDART00000087658ENSDARG00000070121ENSDART00000102646ENSDART00000156740CIL_0005LM_0002ENSG00000078177ENST00000261435ENST00000511480ENST00000513269ENSG00000168421ENST00000381799ENST00000503941ENST00000505618ENST00000507851ENST00000508513ENST00000511121ENST00000511967ENST00000514143ENST00000610353ENST00000613272ENST00000614836ENST00000617441ENSG00000201863ENST00000364993ENSG00000260296ENST00000567102CIL_0005LM_0003ENSMUSG00000029204ENSMUST00000031106ENSMUSG00000037795ENSMUST00000087264ENSMUST00000113738ENSMUST00000138239ENSMUST00000138607ENSMUSG00000072918ENSMUST00000131859ENSMUST00000156943ENSMUSG00000089337ENSMUST00000158712
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000061451 ENSDART00000087658 N/A N/A N/A 1.886±1.05 N/A N/A 2.029±0.80 1.808±1.41 0.299±0.00 N/A 0.878±0.00 N/A N/A N/A
ENSDART00000134113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000070121 ENSDART00000102646 N/A N/A N/A N/A N/A N/A 1.081±0.15 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156740 N/A N/A N/A 0.580±0.41 N/A N/A N/A N/A N/A N/A 0.494±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000078177 ENST00000261435 0.274±0.00 0.158±0.00 N/A 0.048±0.00 0.505±0.05 1.292±0.00 0.291±0.01 0.796±0.72 0.495±0.38 2.066±0.00 0.390±0.00 0.569±0.29 0.593±0.51 0.812±0.00
ENST00000511480 N/A N/A N/A 0.384±0.00 0.603±0.00 0.508±0.00 N/A N/A N/A N/A N/A 0.217±0.13 0.448±0.00 0.364±0.00
ENST00000513269 N/A N/A 0.393±0.00 0.087±0.00 0.775±0.00 0.845±0.00 N/A 2.444±0.00 N/A N/A N/A 0.501±0.22 0.688±0.00 1.302±0.00
ENST00000515550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168421 ENST00000381799 0.071±0.00 1.708±0.00 N/A N/A N/A N/A N/A N/A N/A 0.270±0.00 N/A 0.074±0.00 0.015±0.00 0.012±0.00
ENST00000503754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503941 N/A N/A N/A N/A N/A N/A N/A 0.261±0.00 N/A 2.805±0.00 N/A 0.359±0.25 N/A 0.079±0.00
ENST00000503978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505618 N/A N/A N/A 0.119±0.00 N/A 0.325±0.20 N/A N/A N/A 2.538±0.00 N/A 0.633±0.00 0.250±0.00 N/A
ENST00000507851 N/A N/A N/A N/A N/A N/A 0.206±0.00 N/A 0.307±0.00 N/A N/A 0.117±0.00 N/A N/A
ENST00000508513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.278±0.00 0.116±0.00 N/A
ENST00000511121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.296±0.00 N/A N/A N/A
ENST00000511967 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.126±0.00 N/A N/A N/A N/A
ENST00000513894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514143 N/A N/A N/A N/A N/A 0.377±0.00 N/A N/A N/A N/A 0.205±0.00 N/A N/A N/A
ENST00000514839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610353 N/A N/A N/A N/A 0.315±0.00 N/A 0.061±0.00 0.115±0.00 N/A N/A N/A N/A N/A N/A
ENST00000613272 N/A 4.873±0.00 0.021±0.00 N/A N/A 0.664±0.00 N/A 0.195±0.00 N/A 0.621±0.00 N/A 0.237±0.00 0.145±0.01 0.118±0.00
ENST00000614836 0.086±0.00 4.924±0.00 N/A N/A 0.280±0.00 N/A N/A N/A N/A N/A N/A 0.193±0.03 0.181±0.00 N/A
ENST00000615083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617441 0.148±0.00 N/A 0.008±0.00 N/A N/A 0.133±0.00 N/A 0.081±0.00 0.173±0.00 1.032±0.00 0.017±0.00 0.245±0.01 0.411±0.12 0.365±0.00
ENST00000619474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201863 ENST00000364993 N/A N/A N/A 0.176±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.366±0.00 N/A
ENSG00000260296 ENST00000567102 0.275±0.00 0.624±0.00 0.086±0.00 0.715±0.09 0.211±0.14 0.417±0.07 0.162±0.03 0.463±0.07 0.108±0.00 1.096±0.85 0.223±0.00 0.787±0.53 0.542±0.36 0.604±0.32
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029204 ENSMUST00000031106 0.411±0.15 0.108±0.05 0.214±0.03 0.061±0.01 4.251±1.85 0.513±0.10 0.157±0.08 0.227±0.15 0.251±0.21 0.895±0.19 0.093±0.18 0.402±0.15 0.064±0.03 0.140±0.05
ENSMUSG00000037795 ENSMUST00000087264 N/A N/A 1.263±0.00 N/A N/A N/A N/A N/A N/A N/A 0.162±0.00 1.523±0.22 N/A 2.538±1.63
ENSMUST00000113738 0.200±0.00 1.820±0.26 0.359±0.00 5.236±4.34 1.494±0.66 1.275±0.19 0.354±0.19 1.768±0.21 3.292±1.78 1.154±0.46 0.168±0.00 2.238±0.66 6.971±3.94 2.096±0.76
ENSMUST00000127411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138239 N/A N/A N/A 2.061±0.00 N/A N/A N/A 0.469±0.00 N/A 0.821±0.00 0.187±0.00 2.474±0.00 11.806±0.00 1.038±0.00
ENSMUST00000138607 N/A N/A N/A N/A 3.211±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000072918 ENSMUST00000131859 0.257±0.00 N/A 0.083±0.00 0.195±0.02 N/A N/A 0.081±0.03 N/A 0.050±0.03 N/A N/A N/A 0.185±0.10 0.661±0.00
ENSMUST00000156943 N/A N/A 0.147±0.00 N/A N/A N/A 1.769±0.00 N/A N/A N/A N/A N/A 1.469±0.00 4.778±2.88
ENSMUSG00000089337 ENSMUST00000158712 N/A N/A 0.631±0.00 0.458±0.04 N/A 3.253±0.06 N/A N/A 1.039±0.60 N/A N/A 21.993±20.24 2.145±1.32 2.677±0.00

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