C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005MG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144451-ENSG00000174453 CGP 9606 2:213284379-214578959
GeneTranscriptPositionBiotype
ENSG00000144451 (SPAG16)
sperm associated antigen 16 		ENST00000272898 (SPAG16-201) 213284379-213375219 protein_coding
ENST00000331683 (SPAG16-001) 213284389-214410501 protein_coding
ENST00000406979 (SPAG16-003) 213284389-214410501 nonsense_mediated_decay
ENST00000413312 (SPAG16-004) 213284416-213365418 protein_coding
ENST00000414961 (SPAG16-010) 213296064-213364145 processed_transcript
ENST00000420497 (SPAG16-011) 213284437-213302582 nonsense_mediated_decay
ENST00000432529 (SPAG16-002) 213284392-213317978 protein_coding
ENST00000440779 (SPAG16-009) 213284437-213375054 nonsense_mediated_decay
ENST00000447990 (SPAG16-006) 213284481-213422522 protein_coding
ENST00000451561 (SPAG16-007) 213489963-214410318 protein_coding
ENST00000452556 (SPAG16-005) 213284455-214241376 nonsense_mediated_decay
ENST00000480494 (SPAG16-008) 213923863-214410233 processed_transcript
ENSG00000174453 (VWC2L)
von Willebrand factor C domain containing protein 2-like 		ENST00000312504 (VWC2L-001) 214411065-214578959 protein_coding
ENST00000427124 (VWC2L-003) 214411065-214578959 protein_coding
ENST00000477752 (VWC2L-002) 214411077-214415203 retained_intron
ENSG00000197585 (AC107218.3)
 ENST00000412896 (AC107218.3-002) 214250040-214684246 antisense
ENST00000437883 (AC107218.3-001) 214311602-214684246 antisense
ENSG00000213917 (RPL5P8)
ribosomal protein L5 pseudogene 8 		ENST00000396820 (RPL5P8-001) 214280638-214281452 processed_pseudogene
ENSG00000224257 (VWC2L-IT1)
VWC2L intronic transcript 1 (non-protein coding) 		ENST00000416430 (VWC2L-IT1-001) 214510196-214536890 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0005MG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053153-ENSMUSG00000045648 CGP 10090 1:69826970-70885397
GeneTranscriptPositionBiotype
ENSMUSG00000045648 (Vwc2l)
von Willebrand factor C domain-containing protein 2-like 		ENSMUST00000053922 (Vwc2l-001) 70725715-70885397 protein_coding
ENSMUST00000159205 (Vwc2l-003) 70725752-70732202 retained_intron
ENSMUST00000161937 (Vwc2l-002) 70725902-70885382 protein_coding
ENSMUST00000162182 (Vwc2l-004) 70725923-70882489 protein_coding
ENSMUSG00000053153 (Spag16)
sperm associated antigen 16 		ENSMUST00000065425 (Spag16-001) 69826988-70725132 protein_coding
ENSMUST00000113940 (Spag16-002) 69826992-69926242 protein_coding
ENSMUST00000161131 (Spag16-004) 69831740-69873760 processed_transcript
ENSMUST00000161310 (Spag16-003) 69951621-70725132 processed_transcript
ENSMUST00000187159 (Spag16-005) 69826970-70267277 processed_transcript
ENSMUST00000190833 (Spag16-006) 69826971-70267178 processed_transcript
ENSMUST00000191569 (Spag16-007) 69951648-70282011 processed_transcript
ENSMUSG00000089345 (Gm22665)
predicted gene, 22665 		ENSMUST00000158720 (Gm22665-201) 69921473-69921747 misc_RNA
ENSMUSG00000101730 (RP24-468E2.1)
predicted gene 28580 		ENSMUST00000186767 (RP24-468E2.1-001) 70067968-70068055 unprocessed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005MG_0001ENSG00000144451ENST00000272898ENST00000331683ENST00000406979ENST00000413312ENST00000414961ENST00000420497ENST00000432529ENST00000440779ENST00000447990ENST00000451561ENST00000452556ENST00000480494ENSG00000174453ENST00000312504ENST00000427124ENST00000477752ENSG00000197585ENST00000412896ENST00000437883ENSG00000213917ENST00000396820ENSG00000224257ENST00000416430CIL_0005MG_0002ENSMUSG00000045648ENSMUST00000053922ENSMUST00000159205ENSMUST00000161937ENSMUST00000162182ENSMUSG00000053153ENSMUST00000065425ENSMUST00000113940ENSMUST00000161131ENSMUST00000161310ENSMUST00000187159ENSMUST00000190833ENSMUST00000191569ENSMUSG00000089345ENSMUST00000158720ENSMUSG00000101730ENSMUST00000186767
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005MG_0001ENSG00000144451ENST00000272898ENST00000331683ENST00000414961ENST00000432529ENST00000440779ENST00000447990ENSG00000174453ENST00000312504ENST00000427124ENST00000477752ENSG00000197585ENST00000412896ENST00000437883ENSG00000213917ENST00000396820ENSG00000224257ENST00000416430CIL_0005MG_0002ENSMUSG00000045648ENSMUST00000053922ENSMUST00000159205ENSMUST00000161937ENSMUST00000162182ENSMUSG00000053153ENSMUST00000065425ENSMUST00000113940ENSMUST00000161131ENSMUST00000161310ENSMUST00000190833ENSMUSG00000089345ENSMUST00000158720ENSMUSG00000101730ENSMUST00000186767
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144451 ENST00000272898 N/A N/A 2.868±0.00 N/A 0.542±0.00 2.139±0.00 N/A N/A 1.122±0.00 1.387±0.00 N/A 0.533±0.18 N/A N/A
ENST00000331683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.319±0.00 N/A 6.639±0.41
ENST00000406979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414961 N/A N/A N/A N/A N/A N/A 1.309±0.00 N/A 3.551±0.00 2.806±0.00 0.564±0.30 1.309±0.00 N/A N/A
ENST00000420497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432529 4.592±0.00 3.904±0.00 0.818±0.00 10.216±2.16 4.485±2.31 4.174±3.34 3.159±1.72 5.935±4.51 2.390±0.39 7.553±0.00 0.656±0.21 5.985±4.90 5.026±1.74 14.689±2.20
ENST00000440779 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.799±0.00 N/A N/A N/A N/A
ENST00000447990 N/A N/A N/A N/A N/A N/A N/A N/A 1.002±0.00 N/A N/A 0.518±0.00 N/A N/A
ENST00000451561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000174453 ENST00000312504 N/A N/A N/A 0.145±0.00 N/A N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A N/A
ENST00000427124 N/A N/A N/A 0.839±0.24 N/A 0.010±0.01 N/A N/A N/A N/A N/A N/A 0.007±0.00 0.035±0.00
ENST00000477752 N/A N/A 0.076±0.00 0.555±0.00 N/A 0.082±0.00 N/A N/A 0.214±0.00 0.106±0.00 N/A 0.005±0.00 N/A 0.031±0.00
ENSG00000197585 ENST00000412896 N/A N/A N/A N/A N/A N/A 0.087±0.00 N/A 0.112±0.00 N/A N/A N/A N/A N/A
ENST00000437883 N/A 0.077±0.00 N/A 0.118±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 0.041±0.00
ENSG00000213917 ENST00000396820 1.150±0.00 2.350±0.00 N/A 0.598±0.00 1.609±0.00 2.936±0.00 0.589±0.00 1.895±0.00 1.302±0.00 0.892±0.00 0.496±0.00 0.425±0.00 0.049±0.00 3.829±0.00
ENSG00000224257 ENST00000416430 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.020±0.00 N/A N/A N/A 0.136±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045648 ENSMUST00000053922 N/A N/A N/A 0.882±0.20 N/A N/A N/A 0.030±0.00 0.018±0.00 N/A N/A N/A N/A 0.026±0.00
ENSMUST00000159205 N/A 0.060±0.01 N/A 0.259±0.00 N/A 0.044±0.00 N/A 0.038±0.00 N/A N/A N/A 0.072±0.00 N/A 0.003±0.00
ENSMUST00000161937 N/A 0.038±0.00 N/A 0.200±0.00 N/A N/A N/A 0.013±0.00 0.026±0.01 N/A N/A 0.005±0.00 0.003±0.00 0.014±0.00
ENSMUST00000162182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.00
ENSMUSG00000053153 ENSMUST00000065425 N/A N/A N/A 0.109±0.00 N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A 10.754±0.64
ENSMUST00000113940 N/A N/A 0.007±0.00 0.189±0.12 N/A 0.027±0.00 0.223±0.01 0.018±0.01 0.008±0.00 3.468±0.21 N/A 2.495±0.74 0.024±0.01 N/A
ENSMUST00000161131 N/A N/A 0.009±0.00 1.468±0.00 N/A N/A N/A N/A 0.008±0.00 N/A N/A 2.808±0.00 0.054±0.00 N/A
ENSMUST00000161310 N/A N/A N/A N/A N/A N/A 0.063±0.03 N/A N/A N/A N/A N/A N/A 52.589±22.80
ENSMUST00000187159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.939±0.00 0.044±0.00 N/A
ENSMUST00000191569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000089345 ENSMUST00000158720 N/A N/A N/A 0.395±0.00 N/A N/A N/A N/A N/A 0.400±0.00 N/A 0.394±0.00 N/A 0.837±0.41
ENSMUSG00000101730 ENSMUST00000186767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 141.296±0.00

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