C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005NX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000158201-ENSG00000101752 CGP 9606 18:21650897-21870957
GeneTranscriptPositionBiotype
ENSG00000101752 (MIB1)
mindbomb E3 ubiquitin protein ligase 1 		ENST00000261537 (MIB1-001) 21741320-21870957 protein_coding
ENST00000577749 (MIB1-003) 21798084-21819558 processed_transcript
ENST00000578260 (MIB1-002) 21803733-21819558 retained_intron
ENST00000578646 (MIB1-004) 21704957-21864974 processed_transcript
ENSG00000158201 (ABHD3)
abhydrolase domain containing 3 		ENST00000289119 (ABHD3-001) 21650897-21704805 protein_coding
ENST00000577564 (ABHD3-008) 21651693-21664534 retained_intron
ENST00000577891 (ABHD3-004) 21659180-21704774 nonsense_mediated_decay
ENST00000577928 (ABHD3-010) 21683781-21704575 retained_intron
ENST00000578270 (ABHD3-002) 21651097-21703825 protein_coding
ENST00000579875 (ABHD3-006) 21663850-21704640 processed_transcript
ENST00000579982 (ABHD3-005) 21701276-21704780 retained_intron
ENST00000580477 (ABHD3-009) 21654889-21656956 protein_coding
ENST00000580981 (ABHD3-003) 21650928-21704767 protein_coding
ENST00000584464 (ABHD3-007) 21682900-21703688 protein_coding
ENSG00000199977 (SNORA73)
Small nucleolar RNA SNORA73 family 		ENST00000363107 (SNORA73.1-201) 21817624-21817828 snoRNA
ENSG00000200750 (Y_RNA)
Y RNA 		ENST00000363880 (Y_RNA.1-382) 21724119-21724229 misc_RNA
ENSG00000242971 (RN7SL233P)
RNA, 7SL, cytoplasmic 233, pseudogene 		ENST00000469988 (RN7SL233P-201) 21793883-21794159 misc_RNA
ENSG00000243303 (RP11-268I9.1)
 ENST00000473394 (RP11-268I9.1-001) 21854640-21854987 processed_pseudogene
ENSG00000252677 (SNORA81)
Small nucleolar RNA SNORA81 		ENST00000516868 (SNORA81.1-202) 21711950-21712119 snoRNA
ENSG00000264183 (AC091038.1)
 ENST00000582102 (AC091038.1-201) 21776878-21776977 miRNA
ENSG00000264188 (RP11-13N13.5)
 ENST00000584148 (RP11-13N13.5-001) 21661787-21662395 sense_intronic
ENSG00000265142 (MIR133A1HG)
MIR133A1 host gene (non-protein coding) 		ENST00000577659 (MIR133A1HG-002) 21829433-21831398 antisense
ENST00000581072 (MIR133A1HG-001) 21825487-21831406 antisense
ENST00000581613 (MIR133A1HG-003) 21829087-21831410 antisense
ENSG00000265656 (RP11-13N13.6)
 ENST00000578583 (RP11-13N13.6-001) 21673628-21682561 antisense
CIL_0005NX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002475-ENSMUSG00000024294 CGP 10090 18:10644411-10818704
GeneTranscriptPositionBiotype
ENSMUSG00000002475 (Abhd3)
abhydrolase domain containing 3 		ENSMUST00000002549 (Abhd3-201) 10644413-10706696 protein_coding
ENSMUST00000117726 (Abhd3-002) 10644413-10706713 protein_coding
ENSMUST00000117828 (Abhd3-001) 10644411-10706771 protein_coding
ENSMUST00000144150 (Abhd3-003) 10644413-10658789 protein_coding
ENSMUSG00000024294 (Mib1)
mindbomb homolog 1 (Drosophila) 		ENSMUST00000052838 (Mib1-001) 10725548-10818578 protein_coding
ENSMUST00000124288 (Mib1-004) 10760809-10818704 protein_coding
ENSMUST00000131073 (Mib1-003) 10725744-10755699 retained_intron
ENSMUST00000150000 (Mib1-002) 10798365-10817628 protein_coding
ENSMUST00000165555 (Mib1-201) 10725655-10812174 protein_coding
ENSMUSG00000095438 (Gm21747)
predicted gene, 21747 		ENSMUST00000179771 (Gm21747-001) 10781723-10785883 antisense
ENSMUSG00000097387 (4930563E18Rik)
RIKEN cDNA 4930563E18 gene 		ENSMUST00000180948 (4930563E18Rik-201) 10706860-10711832 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005NX_0001ENSG00000101752ENST00000261537ENST00000577749ENST00000578260ENST00000578646ENSG00000158201ENST00000289119ENST00000577564ENST00000577891ENST00000577928ENST00000578270ENST00000579875ENST00000579982ENST00000580477ENST00000580981ENST00000584464ENSG00000199977ENST00000363107ENSG00000200750ENST00000363880ENSG00000242971ENST00000469988ENSG00000243303ENST00000473394ENSG00000252677ENST00000516868ENSG00000264183ENST00000582102ENSG00000264188ENST00000584148ENSG00000265142ENST00000577659ENST00000581072ENST00000581613ENSG00000265656ENST00000578583CIL_0005NX_0002ENSMUSG00000002475ENSMUST00000002549ENSMUST00000117726ENSMUST00000117828ENSMUST00000144150ENSMUSG00000024294ENSMUST00000052838ENSMUST00000124288ENSMUST00000131073ENSMUST00000150000ENSMUST00000165555ENSMUSG00000095438ENSMUST00000179771ENSMUSG00000097387ENSMUST00000180948
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005NX_0001ENSG00000101752ENST00000261537ENST00000578646ENSG00000158201ENST00000289119ENST00000577564ENST00000577891ENST00000577928ENST00000578270ENST00000579875ENST00000579982ENST00000580981ENSG00000199977ENST00000363107ENSG00000200750ENST00000363880ENSG00000242971ENST00000469988ENSG00000243303ENST00000473394ENSG00000252677ENST00000516868ENSG00000264183ENST00000582102ENSG00000264188ENST00000584148ENSG00000265142ENST00000577659ENST00000581072ENST00000581613ENSG00000265656ENST00000578583CIL_0005NX_0002ENSMUSG00000002475ENSMUST00000002549ENSMUST00000117726ENSMUST00000117828ENSMUST00000144150ENSMUSG00000024294ENSMUST00000052838ENSMUST00000124288ENSMUST00000131073ENSMUST00000150000ENSMUST00000165555ENSMUSG00000095438ENSMUST00000179771ENSMUSG00000097387ENSMUST00000180948
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101752 ENST00000261537 4.499±0.00 2.357±0.00 3.305±0.00 5.366±0.00 3.522±0.12 2.854±0.52 2.353±0.15 3.660±0.95 4.284±2.66 5.739±1.34 1.539±0.50 3.132±1.42 2.130±1.36 6.286±1.31
ENST00000577749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578646 N/A N/A 2.775±0.00 4.582±0.00 5.420±0.00 5.451±0.00 2.265±0.00 N/A 6.648±0.00 N/A 0.486±0.00 7.754±0.00 N/A N/A
ENSG00000158201 ENST00000289119 N/A 1.611±0.00 0.195±0.00 2.144±0.00 1.610±1.00 1.797±0.00 0.384±0.29 7.282±0.00 11.102±0.00 1.645±0.00 N/A 1.873±0.92 2.640±0.38 2.163±0.00
ENST00000577564 N/A N/A N/A 0.732±0.00 N/A N/A 0.685±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000577891 N/A N/A 0.110±0.00 N/A N/A N/A 0.277±0.00 N/A 0.569±0.00 N/A 3.168±0.00 N/A N/A N/A
ENST00000577928 N/A N/A N/A 2.083±0.00 N/A N/A N/A 3.688±0.00 0.849±0.00 N/A N/A 2.004±0.00 N/A N/A
ENST00000578270 N/A 0.402±0.00 N/A N/A 2.073±0.00 0.696±0.00 0.203±0.00 1.191±0.00 N/A 2.779±0.00 0.676±0.00 2.027±1.01 N/A 1.123±0.00
ENST00000579875 N/A N/A N/A N/A N/A N/A N/A 1.061±0.00 N/A N/A N/A 2.437±0.84 1.457±0.00 N/A
ENST00000579982 N/A N/A N/A N/A 0.941±0.00 N/A N/A N/A 0.171±0.00 N/A N/A N/A N/A N/A
ENST00000580477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580981 0.814±0.00 N/A N/A N/A N/A 0.959±0.00 0.447±0.00 N/A N/A 2.156±0.00 N/A 1.724±0.00 0.720±0.00 N/A
ENST00000584464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000199977 ENST00000363107 0.582±0.00 0.083±0.00 N/A 0.824±0.00 6.112±0.00 N/A 0.156±0.00 N/A 2.494±0.00 N/A N/A 0.360±0.00 N/A 0.696±0.00
ENSG00000200750 ENST00000363880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.634±0.00 N/A N/A
ENSG00000242971 ENST00000469988 0.188±0.00 0.335±0.00 N/A 0.728±0.00 0.419±0.00 0.126±0.00 0.062±0.00 0.411±0.00 0.061±0.00 0.466±0.00 N/A 0.441±0.00 0.142±0.00 0.586±0.28
ENSG00000243303 ENST00000473394 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.082±0.00 N/A 0.750±0.33 N/A 0.128±0.00
ENSG00000252677 ENST00000516868 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.147±0.00 N/A N/A N/A N/A
ENSG00000264183 ENST00000582102 0.567±0.00 1.506±0.00 N/A 0.334±0.00 331.422±330.77 N/A 2.071±0.00 2.245±0.00 N/A N/A N/A 102.799±0.00 N/A 0.450±0.17
ENSG00000264188 ENST00000584148 0.532±0.00 3.340±0.00 N/A 1.722±0.00 1.546±0.00 1.228±0.00 0.415±0.00 0.858±0.00 0.506±0.00 1.593±0.00 N/A 0.444±0.29 0.203±0.00 0.742±0.59
ENSG00000265142 ENST00000577659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A
ENST00000581072 N/A N/A N/A N/A N/A 0.013±0.00 2.797±2.04 0.011±0.00 0.625±0.00 1.108±0.00 5.339±0.00 0.068±0.00 0.022±0.01 0.006±0.00
ENST00000581613 N/A N/A N/A 0.215±0.00 N/A N/A N/A N/A N/A 0.127±0.00 20.512±0.00 0.038±0.00 N/A 0.076±0.00
ENSG00000265656 ENST00000578583 N/A N/A 0.235±0.00 0.089±0.00 0.105±0.00 N/A 0.109±0.00 0.389±0.22 0.024±0.00 0.112±0.00 0.380±0.00 0.422±0.23 N/A 0.283±0.23
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002475 ENSMUST00000002549 N/A N/A 0.321±0.00 14.564±0.00 3.756±0.00 N/A 0.983±0.00 N/A 6.748±5.76 N/A 0.195±0.06 7.263±1.25 7.553±2.97 2.342±0.00
ENSMUST00000117726 1.043±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.02 1.326±0.00 N/A N/A
ENSMUST00000117828 3.476±0.55 43.253±21.68 0.769±0.15 1.692±1.35 3.782±0.37 2.797±0.63 1.568±0.10 26.507±3.06 19.349±13.33 2.874±0.94 N/A 10.019±3.06 7.849±4.45 2.261±0.95
ENSMUST00000144150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.04 N/A 5.621±0.00 N/A
ENSMUSG00000024294 ENSMUST00000052838 10.648±3.58 7.839±2.55 2.361±0.68 9.431±1.47 7.248±0.80 7.331±1.21 3.570±0.11 8.380±0.76 5.196±2.19 11.871±0.36 2.480±1.78 15.031±3.84 4.486±1.26 3.209±0.99
ENSMUST00000124288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.552±0.00
ENSMUST00000131073 N/A 7.099±3.55 N/A N/A N/A 4.576±0.91 N/A N/A N/A N/A N/A 5.599±0.00 N/A 8.681±1.19
ENSMUST00000150000 N/A N/A 6.657±0.43 3.563±0.00 N/A N/A N/A N/A 2.468±0.38 N/A 7.238±0.58 5.741±0.61 3.160±0.01 N/A
ENSMUST00000165555 N/A N/A N/A 15.952±0.00 N/A N/A N/A N/A N/A N/A N/A 14.727±0.00 5.118±2.04 21.642±9.32
ENSMUSG00000095438 ENSMUST00000179771 0.216±0.00 N/A 0.204±0.00 0.032±0.00 0.502±0.29 N/A N/A N/A 0.164±0.09 0.249±0.00 6.090±2.59 N/A N/A 0.167±0.00
ENSMUSG00000097387 ENSMUST00000180948 0.041±0.01 0.303±0.00 0.055±0.00 0.020±0.00 0.106±0.01 0.064±0.01 0.089±0.02 0.065±0.02 0.086±0.08 N/A 0.034±0.00 0.103±0.05 0.048±0.01 0.158±0.00

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