C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005OP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000025156-ENSG00000111897 CGP 9606 6:122399546-122471822
GeneTranscriptPositionBiotype
ENSG00000025156 (HSF2)
heat shock transcription factor 2 		ENST00000368455 (HSF2-002) 122399546-122432966 protein_coding
ENST00000452194 (HSF2-201) 122399551-122433119 protein_coding
ENST00000465214 (HSF2-001) 122422156-122431992 protein_coding
ENSG00000111897 (SERINC1)
serine incorporator 1 		ENST00000339697 (SERINC1-001) 122443354-122471822 protein_coding
ENSG00000275339 (RP3-425C14.6)
 ENST00000612510 (RP3-425C14.6-001) 122454358-122454612 processed_pseudogene
ENSG00000279453 (RP3-425C14.4)
 ENST00000624649 (RP3-425C14.4-001) 122436789-122439223 TEC
CIL_0005OP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000019878-ENSMUSG00000019877 CGP 10090 10:57486385-57532530
GeneTranscriptPositionBiotype
ENSMUSG00000019877 (Serinc1)
serine incorporator 1 		ENSMUST00000020027 (Serinc1-001) 57515774-57532530 protein_coding
ENSMUST00000164400 (Serinc1-005) 57525231-57532409 retained_intron
ENSMUST00000166997 (Serinc1-002) 57525225-57532477 retained_intron
ENSMUST00000169122 (Serinc1-003) 57523035-57532428 protein_coding
ENSMUST00000170062 (Serinc1-004) 57523184-57532410 nonsense_mediated_decay
ENSMUSG00000019878 (Hsf2)
heat shock factor 2 		ENSMUST00000079833 (Hsf2-201) 57486385-57513133 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005OP_0001ENSG00000025156ENST00000368455ENST00000452194ENST00000465214ENSG00000111897ENST00000339697ENSG00000275339ENST00000612510ENSG00000279453ENST00000624649CIL_0005OP_0002ENSMUSG00000019877ENSMUST00000020027ENSMUST00000164400ENSMUST00000166997ENSMUST00000169122ENSMUST00000170062ENSMUSG00000019878ENSMUST00000079833
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005OP_0001ENSG00000025156ENST00000368455ENST00000452194ENST00000465214ENSG00000111897ENST00000339697ENSG00000275339ENST00000612510ENSG00000279453ENST00000624649CIL_0005OP_0002ENSMUSG00000019877ENSMUST00000020027ENSMUSG00000019878ENSMUST00000079833
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000025156 ENST00000368455 1.731±0.00 4.395±0.00 N/A 3.790±1.86 1.802±1.52 2.108±0.98 3.775±2.56 1.577±1.30 0.852±0.02 3.743±0.00 8.216±4.59 2.153±0.93 2.020±1.43 19.612±3.62
ENST00000452194 0.836±0.00 0.975±0.00 0.437±0.00 1.543±0.27 1.010±0.00 0.801±0.00 0.906±0.00 0.355±0.00 N/A 0.842±0.00 N/A 2.332±1.26 1.550±0.04 3.187±0.00
ENST00000465214 N/A N/A 1.045±0.00 N/A 2.760±0.18 N/A 2.702±0.00 N/A N/A 2.238±0.00 10.376±0.00 4.669±0.00 N/A N/A
ENSG00000111897 ENST00000339697 83.572±0.00 51.383±0.00 19.395±0.00 155.770±48.11 67.917±32.33 55.951±33.50 27.593±21.21 52.532±21.47 39.364±1.55 66.457±25.40 39.685±23.64 39.265±8.62 64.480±13.56 43.579±4.14
ENSG00000275339 ENST00000612510 0.196±0.00 0.426±0.00 N/A 0.526±0.45 N/A 7.847±0.00 0.936±0.00 N/A 4.085±0.00 0.323±0.00 0.069±0.00 0.068±0.00 N/A N/A
ENSG00000279453 ENST00000624649 4.219±0.00 4.922±0.00 0.667±0.00 10.460±1.82 3.740±1.97 3.180±1.23 1.353±0.63 2.455±0.63 1.256±0.23 2.981±1.30 4.988±4.20 2.206±0.69 1.497±0.28 1.954±1.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019877 ENSMUST00000020027 73.947±3.17 16.868±2.55 73.835±0.01 96.008±4.27 47.636±11.61 20.305±9.87 51.834±7.50 50.518±1.92 47.781±6.53 78.005±6.23 46.524±2.33 27.365±21.04 44.522±25.29 10.456±4.24
ENSMUST00000164400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000019878 ENSMUST00000079833 3.912±2.05 3.828±0.73 3.121±0.06 10.887±3.26 2.433±1.00 1.785±0.46 2.232±0.19 2.448±0.49 3.817±1.44 2.686±0.71 2.941±0.60 5.465±2.02 4.827±1.75 5.443±2.48

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