C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005R0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107651-ENSG00000203805 CGP 9606 10:119892711-120589855
GeneTranscriptPositionBiotype
ENSG00000107651 (SEC23IP)
SEC23 interacting protein 		ENST00000369075 (SEC23IP-001) 119892711-119944658 protein_coding
ENST00000442952 (SEC23IP-006) 119902807-119904662 protein_coding
ENST00000446561 (SEC23IP-003) 119902901-119915815 protein_coding
ENST00000462222 (SEC23IP-005) 119914500-119917925 processed_transcript
ENST00000470478 (SEC23IP-004) 119892745-119898327 processed_transcript
ENST00000475542 (SEC23IP-007) 119929645-119933770 processed_transcript
ENST00000483890 (SEC23IP-002) 119941181-119942502 processed_transcript
ENST00000543134 (SEC23IP-201) 119892783-119915807 protein_coding
ENSG00000180230 (NACAP2)
nascent-polypeptide-associated complex alpha polypeptide pseudogene 2 		ENST00000318548 (NACAP2-001) 119997086-119997709 processed_pseudogene
ENSG00000203805 (PPAPDC1A)
phosphatidic acid phosphatase type 2 domain containing 1A 		ENST00000369073 (PPAPDC1A-001) 120503579-120589851 protein_coding
ENST00000398250 (PPAPDC1A-201) 120456954-120589855 protein_coding
ENST00000427079 (PPAPDC1A-002) 120457222-120589487 protein_coding
ENST00000496437 (PPAPDC1A-003) 120575188-120587496 processed_transcript
ENSG00000220842 (RP11-572P18.1)
 ENST00000495531 (RP11-572P18.1-001) 120354701-120355183 processed_pseudogene
ENSG00000223455 (RP11-781P14.3)
 ENST00000425391 (RP11-781P14.3-001) 120069980-120070159 processed_pseudogene
ENSG00000234522 (RP11-572P18.2)
 ENST00000447093 (RP11-572P18.2-001) 120434983-120440376 unprocessed_pseudogene
ENSG00000265239 (AC073587.1)
 ENST00000580337 (AC073587.1-201) 120463834-120463931 miRNA
ENSG00000265370 (MIR4682)
microRNA 4682 		ENST00000580643 (MIR4682-201) 119958513-119958592 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0005R0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000055319-ENSMUSG00000070366 CGP 10090 7:128744870-129391307
GeneTranscriptPositionBiotype
ENSMUSG00000055319 (Sec23ip)
Sec23 interacting protein 		ENSMUST00000042942 (Sec23ip-201) 128744870-128784836 protein_coding
ENSMUSG00000070366 (Ppapdc1a)
phosphatidic acid phosphatase type 2 domain containing 1A 		ENSMUST00000094018 (Ppapdc1a-201) 129257094-129391307 protein_coding
ENSMUSG00000080363 (Gm25778)
predicted gene, 25778 		ENSMUST00000116713 (Gm25778-201) 128826347-128826467 miRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005R0_0001ENSG00000107651ENST00000369075ENST00000442952ENST00000446561ENST00000462222ENST00000470478ENST00000475542ENST00000483890ENST00000543134ENSG00000180230ENST00000318548ENSG00000203805ENST00000369073ENST00000398250ENST00000427079ENST00000496437ENSG00000220842ENST00000495531ENSG00000223455ENST00000425391ENSG00000234522ENST00000447093ENSG00000265239ENST00000580337ENSG00000265370ENST00000580643CIL_0005R0_0002ENSMUSG00000055319ENSMUST00000042942ENSMUSG00000070366ENSMUST00000094018ENSMUSG00000080363ENSMUST00000116713
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005R0_0001ENSG00000107651ENST00000369075ENST00000543134ENSG00000180230ENST00000318548ENSG00000203805ENST00000369073ENST00000398250ENST00000427079ENST00000496437ENSG00000220842ENST00000495531ENSG00000223455ENST00000425391ENSG00000234522ENST00000447093ENSG00000265239ENST00000580337ENSG00000265370ENST00000580643CIL_0005R0_0002ENSMUSG00000055319ENSMUST00000042942ENSMUSG00000070366ENSMUST00000094018ENSMUSG00000080363ENSMUST00000116713
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107651 ENST00000369075 3.650±0.00 4.581±0.00 N/A 1.421±0.22 2.240±1.76 2.845±0.00 1.114±0.82 3.402±2.07 2.075±0.74 1.830±0.16 2.936±0.00 2.882±1.17 3.092±0.68 5.988±0.00
ENST00000442952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543134 5.007±0.00 N/A 4.766±0.00 3.356±0.00 8.469±0.00 7.225±0.00 2.865±0.38 3.334±0.00 7.073±0.00 4.449±1.27 0.840±0.00 9.915±0.00 3.411±0.16 N/A
ENSG00000180230 ENST00000318548 0.040±0.00 0.021±0.00 N/A 0.063±0.00 0.042±0.00 0.020±0.00 0.019±0.00 N/A N/A N/A 0.055±0.00 0.086±0.00 N/A 0.074±0.00
ENSG00000203805 ENST00000369073 0.101±0.00 N/A N/A 1.732±0.00 0.056±0.00 N/A 0.040±0.00 1.704±0.00 N/A N/A N/A 0.285±0.15 0.101±0.05 1.295±0.19
ENST00000398250 N/A N/A N/A 2.676±0.00 N/A 1.340±0.00 N/A 0.694±0.00 0.209±0.00 0.060±0.00 N/A N/A N/A 2.229±1.60
ENST00000427079 N/A N/A 1.328±0.00 1.340±0.82 N/A 0.656±0.00 N/A 0.281±0.00 0.583±0.00 0.089±0.00 N/A 0.284±0.00 N/A N/A
ENST00000496437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.187±0.05 N/A
ENSG00000220842 ENST00000495531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.406±0.00 N/A N/A
ENSG00000223455 ENST00000425391 N/A N/A N/A N/A N/A N/A N/A 0.162±0.00 0.141±0.00 N/A N/A N/A N/A 0.147±0.00
ENSG00000234522 ENST00000447093 N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000265239 ENST00000580337 N/A 1.043±0.00 N/A 0.552±0.00 N/A N/A N/A 0.263±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000265370 ENST00000580643 N/A N/A N/A 0.465±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000055319 ENSMUST00000042942 10.833±2.39 18.433±0.79 8.157±0.20 7.059±2.48 12.046±4.72 7.682±4.86 4.011±1.54 8.452±2.79 6.989±2.52 12.589±1.58 4.011±0.28 16.956±6.39 12.635±1.80 24.798±3.14
ENSMUSG00000070366 ENSMUST00000094018 0.077±0.04 0.065±0.00 0.705±0.09 2.415±1.47 0.147±0.12 0.158±0.09 0.050±0.01 0.157±0.05 0.041±0.04 0.035±0.00 0.051±0.00 0.206±0.15 0.045±0.00 1.932±0.45
ENSMUSG00000080363 ENSMUST00000116713 N/A N/A N/A 6.615±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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