C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005R8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000071262-ENSDARG00000019150 CGP 7955 17:10103011-10283287
GeneTranscriptPositionBiotype
ENSDARG00000019150 (foxa1)
forkhead box A1 		ENSDART00000022920 (foxa1-001) 10280426-10283287 protein_coding
ENSDARG00000071262 (mipol1)
mirror-image polydactyly 1 		ENSDART00000105266 (mipol1-201) 10170226-10206740 protein_coding
ENSDART00000155503 (mipol1-003) 10239876-10275532 processed_transcript
ENSDART00000156677 (mipol1-002) 10103090-10176732 nonsense_mediated_decay
ENSDART00000157019 (mipol1-001) 10103011-10275726 protein_coding
CIL_0005R8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151338-ENSG00000129514 CGP 9606 14:37197913-37596059
GeneTranscriptPositionBiotype
ENSG00000129514 (FOXA1)
forkhead box A1 		ENST00000250448 (FOXA1-001) 37589984-37595034 protein_coding
ENST00000545425 (FOXA1-002) 37591093-37594262 processed_transcript
ENST00000553751 (FOXA1-003) 37592516-37595110 nonsense_mediated_decay
ENST00000554607 (FOXA1-004) 37593875-37594950 processed_transcript
ENST00000557418 (FOXA1-005) 37595024-37596059 processed_transcript
ENSG00000139865 (TTC6)
tetratricopeptide repeat domain 6 		ENST00000267368 (TTC6-201) 37795308-37842348 protein_coding
ENST00000382320 (TTC6-202) 37795308-37842348 protein_coding
ENST00000476979 (TTC6-002) 37772383-37842694 protein_coding
ENST00000478811 (TTC6-003) 37795308-37842348 nonsense_mediated_decay
ENST00000533625 (TTC6-005) 37611251-38041442 nonsense_mediated_decay
ENST00000553443 (TTC6-001) 37622065-37842463 protein_coding
ENST00000553887 (TTC6-008) 37971989-38041442 processed_transcript
ENST00000554555 (TTC6-004) 37796294-37802390 processed_transcript
ENST00000555921 (TTC6-007) 37827301-37841695 nonsense_mediated_decay
ENST00000556845 (TTC6-006) 37595847-37622318 protein_coding
ENSG00000151338 (MIPOL1)
mirror-image polydactyly 1 		ENST00000327441 (MIPOL1-001) 37197950-37552361 protein_coding
ENST00000396294 (MIPOL1-201) 37197913-37551258 protein_coding
ENST00000537471 (MIPOL1-202) 37219552-37551258 protein_coding
ENST00000539062 (MIPOL1-003) 37198010-37547663 protein_coding
ENST00000539174 (MIPOL1-005) 37267067-37278872 processed_transcript
ENST00000545536 (MIPOL1-203) 37219552-37546053 protein_coding
ENST00000553349 (MIPOL1-010) 37285373-37423810 processed_transcript
ENST00000554114 (MIPOL1-008) 37240424-37267169 processed_transcript
ENST00000554930 (MIPOL1-007) 37198010-37385779 processed_transcript
ENST00000555870 (MIPOL1-004) 37198037-37507790 nonsense_mediated_decay
ENST00000556451 (MIPOL1-002) 37198028-37546059 protein_coding
ENST00000556615 (MIPOL1-011) 37197913-37268718 protein_coding
ENST00000556753 (MIPOL1-012) 37198087-37268791 protein_coding
ENST00000556940 (MIPOL1-009) 37308458-37369939 retained_intron
ENST00000624539 (MIPOL1-006) 37399800-37401900 TEC
ENSG00000258414 (RP11-356O9.1)
 ENST00000554829 (RP11-356O9.1-001) 37564047-37579125 lincRNA
ENSG00000259087 (RP11-356O9.2)
 ENST00000553425 (RP11-356O9.2-001) 37556158-37559484 lincRNA
ENST00000556024 (RP11-356O9.2-002) 37556158-37567095 lincRNA
CIL_0005R8_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047022-ENSMUSG00000035451 CGP 10090 12:57230427-57546121
GeneTranscriptPositionBiotype
ENSMUSG00000035451 (Foxa1)
forkhead box A1 		ENSMUST00000044380 (Foxa1-201) 57540631-57546121 protein_coding
ENSMUSG00000047022 (Mipol1)
mirror-image polydactyly gene 1 homolog (human) 		ENSMUST00000123498 (Mipol1-001) 57230446-57497199 protein_coding
ENSMUST00000128945 (Mipol1-011) 57332429-57366593 processed_transcript
ENSMUST00000130447 (Mipol1-008) 57282173-57497199 protein_coding
ENSMUST00000136006 (Mipol1-010) 57306083-57307676 retained_intron
ENSMUST00000145003 (Mipol1-006) 57230446-57457232 protein_coding
ENSMUST00000148418 (Mipol1-005) 57230436-57326075 retained_intron
ENSMUST00000150292 (Mipol1-004) 57230434-57354220 retained_intron
ENSMUST00000153137 (Mipol1-009) 57282173-57467041 protein_coding
ENSMUST00000153439 (Mipol1-007) 57230491-57367174 retained_intron
ENSMUST00000153755 (Mipol1-003) 57230427-57308695 retained_intron
ENSMUSG00000078982 (Gm11025)
predicted gene 11025 		ENSMUST00000140773 (Gm11025-001) 57272847-57273312 processed_pseudogene
ENSMUSG00000079104 (Prps1l3)
phosphoribosyl pyrophosphate synthetase 1-like 3 		ENSMUST00000139049 (Prps1l3-001) 57230412-57239882 protein_coding
ENSMUSG00000084793 (Gm2568)
predicted gene 2568 		ENSMUST00000146126 (Gm2568-001) 57519043-57520624 processed_pseudogene
ENSMUSG00000086372 (Gm16246)
predicted gene 16246 		ENSMUST00000145464 (Gm16246-001) 57441190-57450120 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005R8_0001ENSDARG00000019150ENSDART00000022920ENSDARG00000071262ENSDART00000105266ENSDART00000155503ENSDART00000156677ENSDART00000157019CIL_0005R8_0002ENSG00000129514ENST00000250448ENST00000545425ENST00000553751ENST00000554607ENST00000557418ENSG00000139865ENST00000267368ENST00000382320ENST00000476979ENST00000478811ENST00000533625ENST00000553443ENST00000553887ENST00000554555ENST00000555921ENST00000556845ENSG00000151338ENST00000327441ENST00000396294ENST00000537471ENST00000539062ENST00000539174ENST00000545536ENST00000553349ENST00000554114ENST00000554930ENST00000555870ENST00000556451ENST00000556615ENST00000556753ENST00000556940ENST00000624539ENSG00000258414ENST00000554829ENSG00000259087ENST00000553425ENST00000556024CIL_0005R8_0003ENSMUSG00000035451ENSMUST00000044380ENSMUSG00000047022ENSMUST00000123498ENSMUST00000128945ENSMUST00000130447ENSMUST00000136006ENSMUST00000145003ENSMUST00000148418ENSMUST00000150292ENSMUST00000153137ENSMUST00000153439ENSMUST00000153755ENSMUSG00000078982ENSMUST00000140773ENSMUSG00000079104ENSMUST00000139049ENSMUSG00000084793ENSMUST00000146126ENSMUSG00000086372ENSMUST00000145464
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005R8_0001ENSDARG00000019150ENSDART00000022920ENSDARG00000071262ENSDART00000105266ENSDART00000155503ENSDART00000156677ENSDART00000157019CIL_0005R8_0002ENSG00000129514ENST00000250448ENST00000545425ENSG00000139865ENST00000267368ENST00000478811ENST00000533625ENST00000553443ENST00000554555ENSG00000151338ENST00000327441ENST00000396294ENST00000537471ENST00000539062ENST00000539174ENST00000545536ENST00000554930ENST00000555870ENST00000624539ENSG00000258414ENST00000554829ENSG00000259087ENST00000553425ENST00000556024CIL_0005R8_0003ENSMUSG00000035451ENSMUST00000044380ENSMUSG00000047022ENSMUST00000123498ENSMUST00000145003ENSMUST00000148418ENSMUSG00000078982ENSMUST00000140773ENSMUSG00000079104ENSMUST00000139049ENSMUSG00000084793ENSMUST00000146126ENSMUSG00000086372ENSMUST00000145464
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019150 ENSDART00000022920 N/A N/A N/A 1.164±0.24 N/A N/A 0.233±0.25 1.042±0.48 1.446±0.00 N/A 0.529±0.00 N/A N/A N/A
ENSDARG00000071262 ENSDART00000105266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.280±0.00 N/A N/A N/A
ENSDART00000155503 N/A N/A N/A 1.127±0.61 N/A N/A 1.721±0.00 N/A N/A N/A 0.578±0.00 N/A N/A N/A
ENSDART00000156677 N/A N/A N/A N/A N/A N/A 2.681±0.00 N/A 0.164±0.00 N/A 0.499±0.00 N/A N/A N/A
ENSDART00000157019 N/A N/A N/A 0.799±0.13 N/A N/A 5.084±3.30 8.147±4.94 0.158±0.00 N/A 0.228±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129514 ENST00000250448 0.046±0.00 N/A 0.022±0.00 0.043±0.00 1.527±0.00 1.748±0.00 N/A 0.897±0.66 7.158±5.63 3.086±2.42 N/A 1.636±1.51 N/A N/A
ENST00000545425 0.031±0.00 0.057±0.00 N/A N/A N/A N/A N/A 0.340±0.00 N/A N/A N/A 0.792±0.00 N/A N/A
ENST00000553751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139865 ENST00000267368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A
ENST00000382320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.019±0.00
ENST00000533625 N/A N/A N/A 0.058±0.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553443 N/A N/A N/A N/A 0.307±0.00 N/A N/A 0.444±0.00 0.167±0.00 N/A N/A N/A N/A 1.531±0.83
ENST00000553887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554555 0.119±0.00 N/A N/A 0.453±0.00 N/A N/A 0.182±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000555921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151338 ENST00000327441 0.249±0.00 0.286±0.00 N/A 0.180±0.00 N/A N/A 0.078±0.00 N/A 0.071±0.00 0.366±0.00 0.195±0.00 0.235±0.00 0.015±0.00 N/A
ENST00000396294 N/A N/A N/A N/A 0.596±0.00 0.310±0.15 N/A N/A N/A 0.474±0.00 N/A 0.273±0.00 N/A N/A
ENST00000537471 N/A N/A N/A N/A N/A N/A 0.175±0.06 0.099±0.00 0.986±0.00 0.358±0.17 0.106±0.00 0.450±0.00 0.025±0.00 N/A
ENST00000539062 0.555±0.00 N/A 0.476±0.00 0.529±0.00 0.574±0.00 0.482±0.00 0.332±0.02 0.664±0.00 0.161±0.00 N/A 0.232±0.00 1.007±0.24 0.117±0.00 3.486±1.08
ENST00000539174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.731±0.00 N/A N/A
ENST00000545536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A
ENST00000553349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554930 N/A N/A N/A 1.336±0.00 N/A N/A N/A N/A N/A N/A 0.257±0.00 N/A N/A 3.551±0.00
ENST00000555870 0.376±0.00 0.895±0.00 0.421±0.00 0.821±0.00 0.365±0.17 0.277±0.00 0.415±0.00 0.535±0.00 0.193±0.00 0.146±0.00 0.074±0.00 N/A 0.301±0.27 0.791±0.00
ENST00000556451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624539 N/A N/A 0.124±0.00 0.107±0.10 0.183±0.00 0.074±0.00 0.053±0.00 0.358±0.00 0.324±0.00 0.204±0.00 N/A 0.218±0.00 N/A 1.515±1.29
ENSG00000258414 ENST00000554829 N/A 0.025±0.00 N/A N/A 0.046±0.00 N/A 0.062±0.05 N/A 0.075±0.00 N/A N/A 0.066±0.00 N/A 0.073±0.03
ENSG00000259087 ENST00000553425 N/A 0.189±0.00 N/A N/A N/A 0.561±0.00 N/A N/A 0.285±0.00 N/A N/A N/A N/A 0.351±0.00
ENST00000556024 0.053±0.00 N/A N/A 0.239±0.00 0.165±0.00 0.700±0.00 0.104±0.00 0.110±0.00 0.050±0.00 0.757±0.00 N/A 0.121±0.00 N/A 0.051±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035451 ENSMUST00000044380 0.155±0.00 0.014±0.00 42.133±10.68 0.726±0.53 6.789±2.85 10.461±1.32 0.247±0.19 0.344±0.11 2.938±1.49 6.294±1.37 0.016±0.00 0.035±0.03 0.512±0.56 0.093±0.05
ENSMUSG00000047022 ENSMUST00000123498 1.017±0.00 N/A 6.605±0.98 0.724±0.00 N/A N/A 0.746±0.02 1.222±0.05 N/A 1.417±0.00 N/A 4.571±0.03 N/A 1.701±0.29
ENSMUST00000128945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145003 N/A N/A N/A 5.466±0.00 N/A 1.904±0.15 N/A N/A N/A 2.780±0.00 N/A 7.438±2.91 8.005±3.32 14.324±12.11
ENSMUST00000148418 N/A N/A N/A N/A 2.202±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000078982 ENSMUST00000140773 0.104±0.00 0.395±0.00 N/A 0.050±0.00 0.273±0.00 0.229±0.06 N/A 0.104±0.00 0.039±0.01 0.124±0.01 N/A 0.430±0.08 0.034±0.00 N/A
ENSMUSG00000079104 ENSMUST00000139049 9.012±4.48 18.048±0.85 6.966±1.59 3.238±1.10 11.264±2.19 8.992±0.94 2.734±1.04 8.424±0.96 10.214±2.70 10.205±1.47 2.594±0.40 18.500±3.68 8.512±3.50 9.265±1.76
ENSMUSG00000084793 ENSMUST00000146126 0.039±0.00 N/A 1.850±0.14 0.008±0.00 0.431±0.10 0.106±0.00 0.057±0.02 0.044±0.00 0.326±0.32 0.359±0.13 0.042±0.00 N/A 0.039±0.02 0.039±0.00
ENSMUSG00000086372 ENSMUST00000145464 0.042±0.00 N/A 0.793±0.18 0.086±0.06 0.099±0.03 0.210±0.00 N/A N/A 0.124±0.07 0.051±0.01 0.026±0.00 N/A 0.020±0.00 N/A

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