C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005RD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000014106-ENSDARG00000063233 CGP 7955 17:9871855-9910242
GeneTranscriptPositionBiotype
ENSDARG00000014106 (cfl2)
cofilin 2 (muscle) 		ENSDART00000008355 (cfl2-001) 9871855-9890018 protein_coding
CIL_0005RD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165410-ENSG00000198604 CGP 9606 14:34706769-34875647
GeneTranscriptPositionBiotype
ENSG00000165410 (CFL2)
cofilin 2 (muscle) 		ENST00000298159 (CFL2-001) 34706769-34714690 protein_coding
ENST00000341223 (CFL2-002) 34710387-34713828 protein_coding
ENST00000422678 (CFL2-003) 34712037-34714577 nonsense_mediated_decay
ENST00000554470 (CFL2-004) 34712008-34714823 nonsense_mediated_decay
ENST00000555765 (CFL2-005) 34712852-34714555 protein_coding
ENST00000556161 (CFL2-006) 34712858-34714236 protein_coding
ENSG00000198604 (BAZ1A)
bromodomain adjacent to zinc finger domain, 1A 		ENST00000358716 (BAZ1A-002) 34752731-34875647 protein_coding
ENST00000360310 (BAZ1A-201) 34752737-34875647 protein_coding
ENST00000382422 (BAZ1A-001) 34752732-34874932 protein_coding
ENST00000553385 (BAZ1A-006) 34783896-34786601 retained_intron
ENST00000553573 (BAZ1A-004) 34810942-34862107 nonsense_mediated_decay
ENST00000553853 (BAZ1A-005) 34828559-34862311 processed_transcript
ENST00000554391 (BAZ1A-009) 34771175-34773726 retained_intron
ENST00000554865 (BAZ1A-010) 34764882-34771659 nonsense_mediated_decay
ENST00000555273 (BAZ1A-007) 34780177-34786091 retained_intron
ENST00000555331 (BAZ1A-012) 34753234-34761776 nonsense_mediated_decay
ENST00000556314 (BAZ1A-008) 34780116-34785974 protein_coding
ENST00000557739 (BAZ1A-011) 34758566-34761936 retained_intron
ENSG00000243824 (RP11-434O22.1)
 ENST00000495231 (RP11-434O22.1-001) 34740336-34740833 processed_pseudogene
ENSG00000258738 (RP11-73E17.2)
 ENST00000557373 (RP11-73E17.2-001) 34874343-34876459 antisense
ENSG00000263691 (AL355885.1)
 ENST00000581314 (AL355885.1-201) 34801531-34801585 miRNA
CIL_0005RD_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062929-ENSMUSG00000035021 CGP 10090 12:54858817-55014348
GeneTranscriptPositionBiotype
ENSMUSG00000035021 (Baz1a)
bromodomain adjacent to zinc finger domain 1A 		ENSMUST00000038926 (Baz1a-201) 54892989-54986336 protein_coding
ENSMUST00000172875 (Baz1a-003) 54954718-55014348 protein_coding
ENSMUST00000173176 (Baz1a-004) 54940359-54944052 nonsense_mediated_decay
ENSMUST00000173177 (Baz1a-006) 54975236-54985936 protein_coding
ENSMUST00000173433 (Baz1a-001) 54893551-54986507 protein_coding
ENSMUST00000173453 (Baz1a-007) 54894173-54895154 retained_intron
ENSMUST00000173529 (Baz1a-002) 54975251-54999102 protein_coding
ENSMUST00000174225 (Baz1a-005) 54923092-54930339 nonsense_mediated_decay
ENSMUSG00000062929 (Cfl2)
cofilin 2, muscle 		ENSMUST00000078124 (Cfl2-201) 54858817-54862877 protein_coding
ENSMUSG00000092233 (Gm20403)
predicted gene 20403 		ENSMUST00000173803 (Gm20403-001) 54986158-54986529 protein_coding
ENSMUSG00000098026 (Gm27014)
predicted gene, 27014 		ENSMUST00000182658 (Gm27014-001) 54963064-54964200 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005RD_0001ENSDARG00000014106ENSDART00000008355CIL_0005RD_0002ENSG00000165410ENST00000298159ENST00000341223ENST00000422678ENST00000554470ENST00000555765ENST00000556161ENSG00000198604ENST00000358716ENST00000360310ENST00000382422ENST00000553385ENST00000553573ENST00000553853ENST00000554391ENST00000554865ENST00000555273ENST00000555331ENST00000556314ENST00000557739ENSG00000243824ENST00000495231ENSG00000258738ENST00000557373ENSG00000263691ENST00000581314CIL_0005RD_0003ENSMUSG00000035021ENSMUST00000038926ENSMUST00000172875ENSMUST00000173176ENSMUST00000173177ENSMUST00000173433ENSMUST00000173453ENSMUST00000173529ENSMUST00000174225ENSMUSG00000062929ENSMUST00000078124ENSMUSG00000092233ENSMUST00000173803ENSMUSG00000098026ENSMUST00000182658
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005RD_0001ENSDARG00000014106ENSDART00000008355CIL_0005RD_0002ENSG00000165410ENST00000298159ENST00000341223ENST00000422678ENST00000554470ENST00000555765ENST00000556161ENSG00000198604ENST00000358716ENST00000360310ENST00000382422ENST00000553385ENST00000555273ENSG00000243824ENST00000495231ENSG00000258738ENST00000557373ENSG00000263691ENST00000581314CIL_0005RD_0003ENSMUSG00000035021ENSMUST00000038926ENSMUST00000173433ENSMUST00000173529ENSMUSG00000062929ENSMUST00000078124ENSMUSG00000092233ENSMUST00000173803ENSMUSG00000098026ENSMUST00000182658
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000014106 ENSDART00000008355 N/A N/A N/A 1.058±0.42 N/A N/A 34.663±6.73 10.726±0.52 1.338±0.00 N/A 57.841±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165410 ENST00000298159 N/A 1.112±0.00 0.654±0.00 N/A N/A N/A N/A N/A N/A 0.620±0.00 N/A N/A N/A N/A
ENST00000341223 9.731±0.00 1.971±0.00 1.233±0.00 10.187±3.66 5.126±1.77 6.103±0.49 23.786±10.90 8.278±0.00 12.706±9.65 3.773±0.00 20.464±3.64 5.350±2.11 5.692±1.58 11.984±5.71
ENST00000422678 N/A N/A N/A 7.369±0.00 5.787±0.00 N/A 11.890±0.00 N/A N/A N/A 34.859±0.00 5.275±1.46 6.293±1.28 5.495±0.00
ENST00000554470 13.622±0.00 8.313±0.00 1.547±0.00 50.596±0.00 17.483±0.00 26.211±0.00 49.579±0.00 10.272±0.00 17.640±0.00 12.134±0.00 92.009±0.00 7.542±3.66 6.021±0.00 17.549±8.72
ENST00000555765 N/A N/A N/A 40.571±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556161 N/A N/A 12.530±0.00 51.270±0.00 31.396±0.00 30.320±0.00 65.945±0.00 53.726±0.00 97.745±0.00 28.754±0.00 274.276±0.00 14.852±0.00 7.263±0.00 N/A
ENSG00000198604 ENST00000358716 N/A N/A N/A N/A 1.139±0.00 1.354±0.00 0.088±0.00 N/A N/A N/A 0.913±0.00 0.978±0.00 N/A 2.459±0.00
ENST00000360310 N/A N/A N/A N/A N/A 0.978±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000382422 6.659±0.00 7.838±0.00 0.140±0.00 0.963±0.60 2.287±0.57 2.406±1.10 1.768±0.00 1.971±0.99 1.770±0.00 13.234±0.00 2.051±0.00 5.614±5.84 2.400±1.10 11.413±0.00
ENST00000553385 N/A N/A 0.961±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.982±0.00 12.320±0.00 N/A
ENST00000555331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243824 ENST00000495231 0.034±0.00 0.036±0.00 N/A N/A 0.075±0.00 0.034±0.00 N/A 0.037±0.00 0.077±0.00 N/A 0.157±0.00 N/A N/A N/A
ENSG00000258738 ENST00000557373 4.978±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000263691 ENST00000581314 N/A 3.978±0.00 N/A N/A 0.995±0.00 N/A 0.882±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035021 ENSMUST00000038926 N/A 0.821±0.00 N/A 0.393±0.00 1.345±0.88 0.584±0.30 N/A 0.481±0.00 0.744±0.26 0.778±0.34 N/A 2.402±0.41 N/A N/A
ENSMUST00000172875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173433 2.720±0.27 1.330±0.57 1.330±0.77 1.409±0.78 3.669±1.22 1.536±0.48 0.559±0.11 1.277±0.53 4.922±3.92 3.251±0.69 0.320±0.09 3.014±1.80 4.438±3.03 14.136±19.11
ENSMUST00000173453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.954±0.00 N/A N/A
ENSMUST00000174225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000062929 ENSMUST00000078124 6.952±2.73 6.896±1.61 36.358±3.93 9.549±3.08 7.514±5.21 6.419±2.06 21.573±7.76 7.991±2.69 5.610±2.20 13.062±2.15 97.738±9.37 4.410±1.64 13.756±4.07 7.105±1.44
ENSMUSG00000092233 ENSMUST00000173803 N/A 7.183±0.53 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000098026 ENSMUST00000182658 N/A N/A 0.010±0.00 0.078±0.00 0.065±0.00 N/A 0.096±0.00 N/A 0.066±0.04 0.091±0.04 N/A N/A 0.063±0.00 0.038±0.00

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