C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005RS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164794-ENSG00000164796 CGP 9606 8:109963645-113437099
GeneTranscriptPositionBiotype
ENSG00000164794 (KCNV1)
potassium channel, subfamily V, member 1 		ENST00000297404 (KCNV1-201) 109967006-109974730 protein_coding
ENST00000524391 (KCNV1-001) 109963645-109975847 protein_coding
ENSG00000164796 (CSMD3)
CUB and Sushi multiple domains 3 		ENST00000297405 (CSMD3-001) 112222928-113437099 protein_coding
ENST00000339701 (CSMD3-007) 112222932-112690042 protein_coding
ENST00000343508 (CSMD3-006) 112222928-113377153 protein_coding
ENST00000455883 (CSMD3-002) 112222932-113436883 protein_coding
ENST00000462254 (CSMD3-009) 113098686-113173900 retained_intron
ENST00000492692 (CSMD3-008) 112310225-112337575 retained_intron
ENST00000493303 (CSMD3-005) 113309205-113436790 retained_intron
ENST00000497026 (CSMD3-003) 113018776-113436939 retained_intron
ENST00000519485 (CSMD3-010) 113098525-113173820 processed_transcript
ENST00000534172 (CSMD3-011) 112224048-112255928 retained_intron
ENSG00000240590 (RP11-403P13.1)
 ENST00000466509 (RP11-403P13.1-001) 110105076-110105964 processed_pseudogene
ENSG00000253103 (RP11-946L20.4)
 ENST00000519506 (RP11-946L20.4-001) 111098961-111236171 lincRNA
ENST00000522778 (RP11-946L20.4-002) 111183292-111236203 lincRNA
ENSG00000253107 (CTD-2544L4.1)
 ENST00000523800 (CTD-2544L4.1-001) 110555408-110556518 processed_pseudogene
ENSG00000253122 (RP11-238I10.1)
 ENST00000523264 (RP11-238I10.1-001) 110609241-110632394 lincRNA
ENSG00000253156 (RP11-58O3.1)
 ENST00000521058 (RP11-58O3.1-001) 111621458-111621797 processed_pseudogene
ENSG00000253434 (RP11-1101K5.1)
 ENST00000521753 (RP11-1101K5.1-003) 111376663-111515336 lincRNA
ENST00000521904 (RP11-1101K5.1-001) 111376639-111470617 lincRNA
ENST00000524236 (RP11-1101K5.1-002) 111416515-111542973 lincRNA
ENSG00000253717 (KB-1299A7.2)
 ENST00000520749 (KB-1299A7.2-001) 110766863-110772759 lincRNA
ENSG00000253877 (RP11-946L20.2)
 ENST00000523557 (RP11-946L20.2-002) 110982950-111027392 lincRNA
ENST00000524283 (RP11-946L20.2-001) 110937690-111027433 lincRNA
ENSG00000253956 (RP11-211F2.1)
 ENST00000522896 (RP11-211F2.1-001) 110334743-110349607 lincRNA
ENSG00000254124 (EEF1A1P37)
eukaryotic translation elongation factor 1 alpha 1 pseudogene 37 		ENST00000522748 (EEF1A1P37-001) 111225585-111227049 processed_pseudogene
ENSG00000254241 (RP11-946L20.1)
 ENST00000523889 (RP11-946L20.1-001) 110933263-110934533 processed_pseudogene
ENSG00000254262 (RP11-58O3.2)
 ENST00000517308 (RP11-58O3.2-002) 111745518-111756826 lincRNA
ENST00000522390 (RP11-58O3.2-001) 111742012-111756632 lincRNA
ENSG00000273996 (AC104946.1)
 ENST00000612616 (AC104946.1-201) 110934669-110934731 miRNA
CIL_0005RS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022342-ENSMUSG00000022311 CGP 10090 15:45106284-48792063
GeneTranscriptPositionBiotype
ENSMUSG00000022311 (Csmd3)
CUB and Sushi multiple domains 3 		ENSMUST00000100670 (Csmd3-201) 47580638-48791989 protein_coding
ENSMUST00000110261 (Csmd3-006) 47947897-47961468 retained_intron
ENSMUST00000160655 (Csmd3-002) 48285611-48791989 retained_intron
ENSMUST00000160658 (Csmd3-004) 47580637-48791933 protein_coding
ENSMUST00000160716 (Csmd3-003) 48254342-48791989 processed_transcript
ENSMUST00000161173 (Csmd3-008) 47629237-47634293 retained_intron
ENSMUST00000161653 (Csmd3-005) 47581723-48001621 protein_coding
ENSMUST00000162006 (Csmd3-007) 47581726-47615201 retained_intron
ENSMUST00000162830 (Csmd3-001) 47580722-48792063 protein_coding
ENSMUSG00000022342 (Kcnv1)
potassium channel, subfamily V, member 1 		ENSMUST00000022967 (Kcnv1-201) 45106284-45114934 protein_coding
ENSMUSG00000089828 (Gm16300)
predicted gene 16300 		ENSMUST00000160031 (Gm16300-001) 47699714-47703827 processed_pseudogene
ENSMUSG00000096157 (Gm5472)
predicted gene 5472 		ENSMUST00000178604 (Gm5472-201) 45978358-45980037 processed_pseudogene
ENSMUSG00000099751 (RP24-178B2.1)
RIKEN cDNA 1700022A22 gene 		ENSMUST00000185294 (RP24-178B2.1-003) 46324571-46353977 lincRNA
ENSMUST00000187130 (RP24-178B2.1-002) 46324559-46373858 lincRNA
ENSMUST00000189172 (RP24-178B2.1-001) 46324585-46373907 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164794 ENST00000297404 N/A N/A 0.078±0.00 1.967±0.00 0.429±0.00 0.160±0.00 N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A
ENST00000524391 0.067±0.00 0.211±0.00 0.031±0.00 4.178±1.22 0.098±0.00 0.086±0.01 0.069±0.01 0.156±0.00 0.034±0.00 0.044±0.00 0.013±0.00 0.008±0.01 0.011±0.00 0.094±0.03
ENSG00000164796 ENST00000297405 N/A N/A N/A 0.321±0.00 N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A 0.149±0.00
ENST00000339701 0.004±0.00 N/A 0.011±0.00 N/A N/A N/A N/A N/A 0.002±0.00 0.029±0.00 N/A 0.014±0.00 N/A N/A
ENST00000343508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 0.002±0.00 0.452±0.00
ENST00000455883 N/A N/A N/A 2.060±0.00 0.023±0.00 N/A N/A N/A N/A N/A N/A N/A 0.003±0.00 N/A
ENST00000462254 N/A N/A N/A N/A N/A N/A 0.570±0.00 N/A N/A 0.681±0.00 N/A N/A N/A 2.239±0.00
ENST00000492692 N/A 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A 0.221±0.00 0.048±0.00 N/A N/A N/A
ENST00000493303 0.022±0.00 0.028±0.00 N/A N/A 0.016±0.00 0.026±0.00 0.011±0.00 0.012±0.00 N/A 0.019±0.00 0.134±0.00 0.002±0.00 0.006±0.00 N/A
ENST00000497026 N/A N/A N/A N/A N/A 0.040±0.00 N/A N/A 0.349±0.00 N/A N/A 0.229±0.00 0.026±0.00 N/A
ENST00000519485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534172 N/A N/A N/A N/A N/A 0.018±0.00 N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000240590 ENST00000466509 0.144±0.00 0.089±0.00 N/A 0.086±0.07 0.174±0.00 0.296±0.00 0.161±0.00 1.388±0.00 0.103±0.00 0.399±0.00 0.243±0.00 0.033±0.00 N/A 0.317±0.00
ENSG00000253103 ENST00000519506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.659±0.00
ENST00000522778 0.575±0.00 1.467±0.00 4.971±0.00 1.382±0.20 2.904±2.05 1.628±1.23 1.953±1.08 1.638±0.74 3.023±2.72 2.699±2.54 0.468±0.08 6.187±8.26 4.948±6.28 22.810±21.71
ENSG00000253107 ENST00000523800 N/A N/A N/A 0.033±0.00 N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000253122 ENST00000523264 0.098±0.00 N/A N/A N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A N/A N/A 0.255±0.07
ENSG00000253156 ENST00000521058 N/A N/A N/A N/A 0.495±0.00 N/A N/A N/A N/A N/A N/A 0.129±0.00 N/A N/A
ENSG00000253434 ENST00000521753 N/A N/A N/A 0.015±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.042±0.00
ENST00000521904 0.304±0.00 N/A N/A N/A 0.457±0.00 N/A N/A N/A 0.349±0.00 N/A N/A 0.105±0.00 N/A 0.036±0.00
ENST00000524236 0.513±0.00 N/A N/A N/A 0.154±0.05 N/A N/A N/A 0.241±0.00 N/A N/A N/A N/A 0.102±0.00
ENSG00000253717 ENST00000520749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.00
ENSG00000253877 ENST00000523557 N/A N/A N/A 0.485±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524283 N/A 0.106±0.00 N/A 0.704±0.41 N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A 0.176±0.09
ENSG00000253956 ENST00000522896 N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000254124 ENST00000522748 N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.101±0.00
ENSG00000254241 ENST00000523889 N/A N/A N/A 0.010±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254262 ENST00000517308 N/A N/A N/A N/A 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.714±0.23
ENST00000522390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.316±1.92
ENSG00000273996 ENST00000612616 N/A N/A N/A N/A N/A N/A 3.806±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022311 ENSMUST00000100670 N/A N/A N/A 0.198±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110261 N/A N/A N/A N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A 0.033±0.00 N/A 0.544±0.10
ENSMUST00000160655 N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 0.040±0.00 N/A N/A N/A N/A N/A
ENSMUST00000160658 N/A N/A N/A 0.526±0.31 N/A N/A N/A N/A 0.002±0.00 N/A N/A 0.007±0.00 0.001±0.00 N/A
ENSMUST00000160716 0.019±0.00 N/A N/A 2.074±0.86 N/A N/A N/A N/A 0.023±0.00 0.029±0.00 N/A 0.147±0.07 0.013±0.01 N/A
ENSMUST00000161173 N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A 0.034±0.01 N/A N/A
ENSMUST00000161653 0.005±0.00 N/A N/A 0.605±0.00 N/A 0.012±0.00 N/A N/A 0.001±0.00 N/A 0.005±0.00 0.003±0.00 0.004±0.00 0.217±0.15
ENSMUST00000162006 N/A N/A N/A N/A N/A N/A N/A N/A 0.009±0.01 N/A N/A N/A 0.004±0.00 N/A
ENSMUST00000162830 N/A N/A 0.023±0.00 0.602±0.34 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022342 ENSMUST00000022967 N/A 0.020±0.00 0.472±0.02 2.716±1.54 N/A 0.183±0.07 0.016±0.00 0.010±0.00 0.002±0.00 0.263±0.18 N/A N/A 0.002±0.00 0.106±0.01
ENSMUSG00000089828 ENSMUST00000160031 0.489±0.23 0.118±0.03 0.195±0.15 0.434±0.27 0.622±0.26 0.370±0.26 0.261±0.09 0.254±0.05 0.097±0.09 0.762±0.21 0.018±0.01 0.395±0.17 0.078±0.03 0.778±0.12
ENSMUSG00000096157 ENSMUST00000178604 N/A N/A 0.022±0.00 0.045±0.03 0.031±0.00 N/A N/A N/A 0.007±0.00 N/A N/A 0.025±0.00 0.020±0.01 0.627±0.17
ENSMUSG00000099751 ENSMUST00000185294 N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A N/A N/A N/A 32.205±3.75
ENSMUST00000187130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.735±0.00
ENSMUST00000189172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.575±0.59

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