C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005TA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000030064-ENSDARG00000032831 CGP 7955 17:21717838-21789571
GeneTranscriptPositionBiotype
ENSDARG00000030064 (plekha1)
pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 		ENSDART00000044876 (plekha1-201) 21717874-21743342 protein_coding
ENSDART00000131929 (plekha1-001) 21717838-21743343 protein_coding
ENSDART00000142178 (plekha1-002) 21732073-21742517 protein_coding
ENSDARG00000032831 (htra1a)
HtrA serine peptidase 1a 		ENSDART00000048136 (htra1a-001) 21749146-21789571 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005TA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040268-ENSMUSG00000006205 CGP 10090 7:130865756-130985660
GeneTranscriptPositionBiotype
ENSMUSG00000006205 (Htra1)
HtrA serine peptidase 1 		ENSMUST00000006367 (Htra1-001) 130936203-130985660 protein_coding
ENSMUST00000140741 (Htra1-004) 130981670-130982443 retained_intron
ENSMUST00000150717 (Htra1-003) 130936111-130979934 retained_intron
ENSMUST00000150905 (Htra1-005) 130982730-130985396 processed_transcript
ENSMUST00000153290 (Htra1-002) 130943489-130985660 processed_transcript
ENSMUSG00000040268 (Plekha1)
pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 		ENSMUST00000048180 (Plekha1-003) 130865910-130913302 protein_coding
ENSMUST00000075181 (Plekha1-001) 130865898-130912068 protein_coding
ENSMUST00000120441 (Plekha1-002) 130865756-130913312 protein_coding
ENSMUST00000126355 (Plekha1-011) 130904904-130911163 protein_coding
ENSMUST00000135359 (Plekha1-012) 130905304-130910901 retained_intron
ENSMUST00000136963 (Plekha1-009) 130900534-130909676 processed_transcript
ENSMUST00000140153 (Plekha1-006) 130865887-130878153 retained_intron
ENSMUST00000146111 (Plekha1-010) 130902245-130908900 retained_intron
ENSMUST00000148513 (Plekha1-005) 130865885-130894741 retained_intron
ENSMUST00000149029 (Plekha1-008) 130896991-130905426 retained_intron
ENSMUST00000151119 (Plekha1-004) 130865903-130909821 nonsense_mediated_decay
ENSMUST00000154282 (Plekha1-007) 130882352-130885520 retained_intron
ENSMUSG00000086108 (Gm5602)
predicted gene 5602 		ENSMUST00000146366 (Gm5602-001) 130861299-130866330 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TA_0001ENSDARG00000030064ENSDART00000044876ENSDART00000131929ENSDART00000142178ENSDARG00000032831ENSDART00000048136CIL_0005TA_0002ENSMUSG00000006205ENSMUST00000006367ENSMUST00000140741ENSMUST00000150717ENSMUST00000150905ENSMUST00000153290ENSMUSG00000040268ENSMUST00000048180ENSMUST00000075181ENSMUST00000120441ENSMUST00000126355ENSMUST00000135359ENSMUST00000136963ENSMUST00000140153ENSMUST00000146111ENSMUST00000148513ENSMUST00000149029ENSMUST00000151119ENSMUST00000154282ENSMUSG00000086108ENSMUST00000146366
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TA_0001ENSDARG00000030064ENSDART00000044876ENSDART00000131929ENSDART00000142178ENSDARG00000032831ENSDART00000048136CIL_0005TA_0002ENSMUSG00000006205ENSMUST00000006367ENSMUST00000150717ENSMUST00000150905ENSMUST00000153290ENSMUSG00000040268ENSMUST00000048180ENSMUST00000075181ENSMUST00000120441ENSMUST00000149029ENSMUST00000151119ENSMUSG00000086108ENSMUST00000146366
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000030064 ENSDART00000044876 N/A N/A N/A 16.812±3.57 N/A N/A 6.204±3.84 7.612±4.67 0.514±0.00 N/A 3.969±0.00 N/A N/A N/A
ENSDART00000131929 N/A N/A N/A 2.812±0.00 N/A N/A N/A 2.197±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000142178 N/A N/A N/A 12.141±0.00 N/A N/A 2.679±0.00 N/A 0.329±0.00 N/A 4.500±0.00 N/A N/A N/A
ENSDARG00000032831 ENSDART00000048136 N/A N/A N/A 3.681±2.79 N/A N/A 8.253±6.47 2.677±0.65 0.087±0.00 N/A 4.297±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006205 ENSMUST00000006367 76.193±7.36 14.467±1.95 70.584±8.84 7.507±5.62 67.202±1.56 23.391±1.60 28.247±6.41 43.405±2.43 0.537±0.35 20.651±2.68 7.379±1.31 218.979±57.10 21.529±21.71 1.812±0.72
ENSMUST00000140741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150717 N/A 32.589±11.10 N/A N/A 56.816±24.95 15.102±2.38 N/A 7.300±0.00 0.444±0.09 10.632±3.74 N/A 115.158±24.97 N/A 0.349±0.00
ENSMUST00000150905 N/A N/A N/A N/A N/A N/A N/A N/A 0.365±0.22 N/A N/A N/A 1.901±0.00 1.775±0.50
ENSMUST00000153290 N/A N/A N/A 50.702±0.00 83.262±0.00 N/A 4.513±0.00 N/A 0.177±0.16 N/A 4.205±1.32 217.613±21.04 46.282±20.40 1.326±0.92
ENSMUSG00000040268 ENSMUST00000048180 N/A N/A 8.700±2.12 13.627±8.48 3.201±0.00 7.384±5.63 N/A N/A 2.759±3.47 N/A 2.695±0.00 6.892±0.00 6.630±3.64 0.542±0.07
ENSMUST00000075181 N/A N/A N/A 9.109±0.00 5.434±0.00 N/A N/A N/A N/A N/A 1.919±0.00 10.779±0.00 10.451±5.32 2.559±0.00
ENSMUST00000120441 2.195±0.00 1.096±0.00 8.671±0.38 21.589±5.58 3.459±0.84 N/A 4.137±0.07 3.696±0.48 2.022±2.57 6.399±1.57 2.491±1.73 4.569±0.92 6.707±0.57 0.948±0.00
ENSMUST00000126355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149029 N/A N/A N/A 13.654±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 25.916±0.00 N/A
ENSMUST00000151119 N/A N/A N/A 21.893±0.00 N/A N/A N/A N/A N/A N/A N/A 5.101±0.00 N/A 0.822±0.00
ENSMUST00000154282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086108 ENSMUST00000146366 0.206±0.08 0.296±0.12 0.206±0.02 0.190±0.07 0.159±0.09 0.678±0.13 0.210±0.04 0.506±0.06 0.119±0.06 0.401±0.10 0.061±0.02 0.261±0.09 0.222±0.07 0.112±0.06

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