C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005TK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015991-ENSDARG00000040149 CGP 7955 10:44299320-44553828
GeneTranscriptPositionBiotype
ENSDARG00000015991 (SSBP2 (1 of 2))
single-stranded DNA binding protein 2 		ENSDART00000114170 (SSBP2 (1 of 2)-201) 44299320-44437450 protein_coding
ENSDARG00000040149 (atg10)
ATG10 autophagy related 10 homolog (S. cerevisiae) 		ENSDART00000058725 (atg10-001) 44402658-44553828 protein_coding
ENSDART00000130269 (atg10-201) 44402697-44553560 protein_coding
ENSDART00000134002 (atg10-002) 44402727-44553561 nonsense_mediated_decay
CIL_0005TK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000145687-ENSG00000152348 CGP 9606 5:81413021-82276857
GeneTranscriptPositionBiotype
ENSG00000145687 (SSBP2)
single-stranded DNA binding protein 2 		ENST00000320672 (SSBP2-001) 81413021-81751253 protein_coding
ENST00000504136 (SSBP2-015) 81420435-81443273 retained_intron
ENST00000504174 (SSBP2-010) 81467017-81750901 processed_transcript
ENST00000504985 (SSBP2-008) 81419936-81513717 protein_coding
ENST00000505980 (SSBP2-007) 81420014-81751047 protein_coding
ENST00000506960 (SSBP2-014) 81615056-81751028 retained_intron
ENST00000507472 (SSBP2-017) 81466973-81751120 processed_transcript
ENST00000507655 (SSBP2-012) 81446869-81751797 processed_transcript
ENST00000507968 (SSBP2-018) 81615486-81616585 processed_transcript
ENST00000508912 (SSBP2-016) 81636472-81751016 retained_intron
ENST00000509013 (SSBP2-013) 81466974-81751022 protein_coding
ENST00000509053 (SSBP2-006) 81419873-81751048 protein_coding
ENST00000509743 (SSBP2-019) 81442651-81616473 processed_transcript
ENST00000510060 (SSBP2-021) 81419979-81448063 processed_transcript
ENST00000512098 (SSBP2-011) 81473700-81750757 processed_transcript
ENST00000512923 (SSBP2-009) 81419963-81513717 protein_coding
ENST00000513785 (SSBP2-020) 81420288-81437830 retained_intron
ENST00000514493 (SSBP2-003) 81419918-81751250 protein_coding
ENST00000515395 (SSBP2-004) 81420181-81751097 protein_coding
ENST00000615665 (SSBP2-201) 81417360-81751253 protein_coding
ENST00000622130 (SSBP2-202) 81419935-81751086 protein_coding
ENSG00000186468 (RPS23)
ribosomal protein S23 		ENST00000296674 (RPS23-001) 82273358-82278577 protein_coding
ENST00000503605 (RPS23-003) 82276155-82278143 processed_transcript
ENST00000504293 (RPS23-004) 82276060-82277951 retained_intron
ENST00000507980 (RPS23-006) 82275878-82278354 protein_coding
ENST00000510019 (RPS23-005) 82275421-82278396 protein_coding
ENST00000510210 (RPS23-008) 82274524-82278341 protein_coding
ENST00000511844 (RPS23-002) 82277359-82278355 protein_coding
ENST00000512493 (RPS23-007) 82275244-82278351 protein_coding
ENSG00000214857 (SHFM1P1)
split hand/foot malformation (ectrodactyly) type 1 pseudogene 1 		ENST00000506694 (SHFM1P1-001) 81892490-81892721 processed_pseudogene
ENSG00000236447 (ATG10-IT1)
ATG10 intronic transcript 1 (non-protein coding) 		ENST00000396880 (ATG10-IT1-001) 81991995-81992481 sense_intronic
ENSG00000248192 (ATG10-AS1)
ATG10 antisense RNA 1 		ENST00000504846 (ATG10-AS1-001) 82073055-82073702 antisense
ENSG00000249483 (CTD-2249K22.1)
 ENST00000512859 (CTD-2249K22.1-001) 81851601-81852201 lincRNA
ENSG00000251374 (RPS23P5)
 ENST00000510378 (RPS23P5-001) 82265157-82265259 processed_pseudogene
ENSG00000251495 (PPIAP11)
peptidylprolyl isomerase A (cyclophilin A) pseudogene 11 		ENST00000510729 (PPIAP11-001) 82009602-82010094 processed_pseudogene
ENSG00000265684 (RN7SL378P)
RNA, 7SL, cytoplasmic 378, pseudogene 		ENST00000582657 (RN7SL378P-201) 82078427-82078724 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TK_0001ENSDARG00000015991ENSDART00000114170ENSDARG00000040149ENSDART00000058725ENSDART00000130269ENSDART00000134002CIL_0005TK_0002ENSG00000145687ENST00000320672ENST00000504136ENST00000504174ENST00000504985ENST00000505980ENST00000506960ENST00000507472ENST00000507655ENST00000507968ENST00000508912ENST00000509013ENST00000509053ENST00000509743ENST00000510060ENST00000512098ENST00000512923ENST00000513785ENST00000514493ENST00000515395ENST00000615665ENST00000622130ENSG00000186468ENST00000296674ENST00000503605ENST00000504293ENST00000507980ENST00000510019ENST00000510210ENST00000511844ENST00000512493ENSG00000214857ENST00000506694ENSG00000236447ENST00000396880ENSG00000248192ENST00000504846ENSG00000249483ENST00000512859ENSG00000251374ENST00000510378ENSG00000251495ENST00000510729ENSG00000265684ENST00000582657
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TK_0001ENSDARG00000015991ENSDART00000114170ENSDARG00000040149ENSDART00000058725ENSDART00000130269ENSDART00000134002CIL_0005TK_0002ENSG00000145687ENST00000320672ENST00000504985ENST00000505980ENST00000507968ENST00000508912ENST00000510060ENST00000514493ENST00000515395ENST00000615665ENST00000622130ENSG00000186468ENST00000296674ENST00000504293ENST00000507980ENST00000510019ENST00000512493ENSG00000214857ENST00000506694ENSG00000236447ENST00000396880ENSG00000248192ENST00000504846ENSG00000249483ENST00000512859ENSG00000251374ENST00000510378ENSG00000251495ENST00000510729ENSG00000265684ENST00000582657
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015991 ENSDART00000114170 N/A N/A N/A 8.862±7.14 N/A N/A 1.947±0.36 0.186±0.00 0.056±0.00 N/A 1.153±0.00 N/A N/A N/A
ENSDARG00000040149 ENSDART00000058725 N/A N/A N/A 0.737±0.43 N/A N/A 1.702±0.92 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000130269 N/A N/A N/A 1.147±0.38 N/A N/A 3.354±0.93 4.605±0.00 0.232±0.00 N/A 1.058±0.00 N/A N/A N/A
ENSDART00000134002 N/A N/A N/A 0.782±0.46 N/A N/A N/A 0.823±0.00 0.333±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145687 ENST00000320672 0.480±0.00 N/A 0.768±0.00 1.512±0.65 0.923±0.15 1.288±0.58 0.649±0.00 0.358±0.30 N/A 0.879±0.34 N/A 1.574±1.27 0.248±0.01 0.389±0.12
ENST00000504136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504985 N/A N/A N/A N/A N/A N/A N/A 0.487±0.00 N/A N/A N/A N/A 1.192±0.35 N/A
ENST00000505980 N/A N/A N/A N/A N/A N/A 2.471±0.00 N/A N/A 3.620±0.00 3.046±0.00 2.389±1.41 1.908±0.39 4.643±0.00
ENST00000506960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507968 N/A N/A 10.778±0.00 N/A 10.965±0.00 14.943±0.00 13.711±0.00 7.714±0.00 29.652±0.00 19.610±0.00 5.057±0.00 18.659±0.00 N/A N/A
ENST00000508912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.612±0.00 N/A N/A N/A
ENST00000509013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.464±0.00 1.230±0.00 N/A
ENST00000512098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.166±0.00 N/A
ENST00000515395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.689±0.00 N/A N/A N/A
ENST00000615665 N/A N/A N/A 1.938±0.00 1.685±0.00 1.328±0.00 0.387±0.00 N/A 2.895±0.00 3.444±0.00 0.246±0.00 0.873±0.00 N/A N/A
ENST00000622130 6.069±0.00 2.728±0.00 N/A 4.912±0.72 3.941±2.55 8.761±0.00 6.386±0.00 6.237±0.00 0.900±0.00 5.233±0.00 2.145±0.00 11.253±2.35 4.898±0.20 9.989±0.00
ENSG00000186468 ENST00000296674 11.212±0.00 16.413±0.00 6.580±0.00 21.047±1.15 7.746±0.00 19.459±9.05 7.945±1.38 12.882±6.29 20.637±0.00 9.495±0.00 7.628±0.00 9.768±0.00 N/A 9.110±3.11
ENST00000503605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504293 124.928±0.00 N/A N/A N/A 46.697±6.66 28.453±0.00 47.720±35.88 52.204±23.73 89.364±0.00 110.208±93.24 127.440±110.27 334.109±254.08 389.910±106.45 81.354±33.57
ENST00000507980 49.073±0.00 141.819±0.00 N/A 36.784±0.00 79.887±0.00 88.838±0.00 N/A N/A N/A N/A N/A N/A N/A 45.864±0.00
ENST00000510019 49.580±0.00 63.295±0.00 N/A 33.041±0.00 26.113±0.00 95.147±0.00 25.207±0.00 28.733±0.00 20.396±0.00 41.159±0.00 66.580±0.00 132.142±30.60 61.290±14.51 48.921±0.00
ENST00000510210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512493 107.014±0.00 235.133±0.00 44.119±0.00 95.400±29.69 79.093±13.91 263.894±194.56 106.384±69.90 127.014±62.12 149.190±38.02 352.794±280.49 408.576±310.22 574.261±623.32 422.575±228.46 130.794±44.24
ENSG00000214857 ENST00000506694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.206±0.90 N/A N/A
ENSG00000236447 ENST00000396880 0.157±0.00 0.239±0.00 0.220±0.00 0.214±0.00 0.134±0.00 0.021±0.00 0.091±0.00 0.069±0.00 1.142±0.00 0.053±0.00 N/A 0.090±0.00 N/A 0.173±0.01
ENSG00000248192 ENST00000504846 N/A N/A 1.676±0.00 0.153±0.00 0.178±0.00 2.031±0.00 N/A N/A 2.489±0.00 1.240±0.00 N/A 0.066±0.02 N/A 0.058±0.00
ENSG00000249483 ENST00000512859 N/A N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251374 ENST00000510378 N/A 0.614±0.00 N/A 0.401±0.00 N/A N/A N/A 0.983±0.00 N/A N/A N/A N/A 0.847±0.00 0.761±0.00
ENSG00000251495 ENST00000510729 0.151±0.00 0.158±0.00 N/A 0.260±0.04 0.902±0.71 0.158±0.07 0.079±0.01 0.411±0.00 0.129±0.01 1.388±0.00 0.028±0.00 0.250±0.14 0.697±0.18 0.058±0.00
ENSG00000265684 ENST00000582657 0.162±0.00 0.224±0.00 0.342±0.00 0.417±0.00 0.154±0.10 0.262±0.00 N/A 0.057±0.00 0.253±0.00 0.054±0.00 N/A 0.277±0.00 N/A 0.153±0.10

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