C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005TP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032083-ENSDARG00000027638 CGP 7955 10:18982491-19036799
GeneTranscriptPositionBiotype
ENSDARG00000027638 (adra1ab)
adrenergic, alpha-1Ab, receptor 		ENSDART00000141764 (adra1ab-001) 19030075-19036799 protein_coding
ENSDARG00000032083 (dpysl2b)
dihydropyrimidinase-like 2b 		ENSDART00000146517 (dpysl2b-001) 18982491-19022691 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005TP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000092964-ENSG00000120907 CGP 9606 8:26514275-26867273
GeneTranscriptPositionBiotype
ENSG00000092964 (DPYSL2)
dihydropyrimidinase-like 2 		ENST00000311151 (DPYSL2-001) 26577843-26658178 protein_coding
ENST00000474808 (DPYSL2-003) 26637530-26643522 processed_transcript
ENST00000493789 (DPYSL2-007) 26577062-26583965 protein_coding
ENST00000521913 (DPYSL2-005) 26514275-26658173 protein_coding
ENST00000521983 (DPYSL2-010) 26627215-26643145 processed_transcript
ENST00000523027 (DPYSL2-002) 26578405-26656027 protein_coding
ENST00000523093 (DPYSL2-009) 26623849-26634836 retained_intron
ENST00000523690 (DPYSL2-008) 26619508-26624173 processed_transcript
ENSG00000120907 (ADRA1A)
adrenoceptor alpha 1A 		ENST00000276393 (ADRA1A-003) 26769705-26865405 protein_coding
ENST00000354550 (ADRA1A-002) 26765854-26865169 protein_coding
ENST00000380572 (ADRA1A-005) 26779053-26865405 protein_coding
ENST00000380573 (ADRA1A-008) 26770026-26867273 protein_coding
ENST00000380582 (ADRA1A-001) 26756396-26865405 protein_coding
ENST00000380586 (ADRA1A-004) 26748150-26865405 protein_coding
ENST00000518621 (ADRA1A-011) 26770210-26854574 processed_transcript
ENST00000518810 (ADRA1A-010) 26853730-26854651 processed_transcript
ENST00000519096 (ADRA1A-007) 26748150-26865405 nonsense_mediated_decay
ENST00000519229 (ADRA1A-009) 26756560-26864976 protein_coding
ENST00000521711 (ADRA1A-006) 26756396-26865405 nonsense_mediated_decay
ENSG00000240519 (RP11-384C12.1)
 ENST00000486251 (RP11-384C12.1-001) 26771790-26772140 processed_pseudogene
ENSG00000253208 (RP11-1G11.2)
 ENST00000524123 (RP11-1G11.2-001) 26547669-26548463 processed_pseudogene
ENSG00000253813 (COX6B1P4)
cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous) pseudogene 4 		ENST00000519826 (COX6B1P4-001) 26835817-26836300 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TP_0001ENSDARG00000027638ENSDART00000141764ENSDARG00000032083ENSDART00000146517CIL_0005TP_0002ENSG00000092964ENST00000311151ENST00000474808ENST00000493789ENST00000521913ENST00000521983ENST00000523027ENST00000523093ENST00000523690ENSG00000120907ENST00000276393ENST00000354550ENST00000380572ENST00000380573ENST00000380582ENST00000380586ENST00000518621ENST00000518810ENST00000519096ENST00000519229ENST00000521711ENSG00000240519ENST00000486251ENSG00000253208ENST00000524123ENSG00000253813ENST00000519826
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TP_0001ENSDARG00000027638ENSDART00000141764ENSDARG00000032083ENSDART00000146517CIL_0005TP_0002ENSG00000092964ENST00000311151ENST00000521913ENST00000523027ENSG00000120907ENST00000276393ENST00000354550ENST00000380572ENST00000380573ENST00000380582ENST00000380586ENST00000518621ENST00000518810ENST00000519096ENST00000519229ENST00000521711ENSG00000240519ENST00000486251ENSG00000253208ENST00000524123ENSG00000253813ENST00000519826
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000027638 ENSDART00000141764 N/A N/A N/A 1.594±1.02 N/A N/A N/A 0.114±0.00 N/A N/A 0.151±0.00 N/A N/A N/A
ENSDARG00000032083 ENSDART00000146517 N/A N/A N/A N/A N/A N/A 2.838±1.67 N/A 0.224±0.00 N/A 3.270±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000092964 ENST00000311151 42.962±0.00 9.056±0.00 5.896±0.00 121.296±59.15 15.288±0.90 20.711±10.42 13.821±5.44 4.102±2.54 9.109±6.70 38.975±2.41 4.343±2.72 11.921±9.07 5.851±1.89 7.817±6.47
ENST00000474808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521913 N/A N/A 2.184±0.00 40.422±0.00 4.122±0.00 N/A 2.742±0.00 3.707±0.00 8.726±0.00 N/A 0.736±0.00 5.888±0.00 N/A N/A
ENST00000521983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523027 N/A N/A N/A N/A N/A N/A N/A 1.230±0.00 N/A N/A 3.497±0.00 N/A N/A N/A
ENST00000523093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000120907 ENST00000276393 0.292±0.00 0.237±0.00 N/A N/A 0.640±0.00 N/A N/A 0.067±0.00 N/A 0.858±0.11 N/A 0.111±0.00 N/A 0.152±0.00
ENST00000354550 0.406±0.00 0.351±0.00 N/A N/A 0.304±0.00 N/A N/A N/A N/A 0.374±0.00 N/A 0.164±0.00 N/A 0.261±0.00
ENST00000380572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.114±0.00 0.050±0.00 N/A N/A
ENST00000380573 N/A N/A 0.065±0.00 N/A 0.321±0.00 0.030±0.00 N/A 8.224±8.07 0.518±0.00 N/A N/A 0.278±0.25 N/A N/A
ENST00000380582 N/A N/A N/A 1.360±0.00 3.482±0.00 N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A
ENST00000380586 N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A 0.108±0.00 0.032±0.00 0.228±0.06
ENST00000518621 N/A N/A N/A N/A N/A 0.701±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.229±0.00
ENST00000519096 N/A N/A N/A N/A N/A N/A N/A 0.147±0.00 N/A N/A N/A N/A N/A N/A
ENST00000519229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A
ENST00000521711 N/A N/A 0.081±0.00 N/A N/A 0.345±0.00 N/A 0.084±0.00 N/A N/A N/A 0.069±0.00 N/A 0.309±0.00
ENSG00000240519 ENST00000486251 N/A N/A N/A 0.208±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253208 ENST00000524123 0.018±0.00 N/A N/A 0.099±0.01 N/A 0.251±0.00 0.018±0.00 0.197±0.00 N/A 0.307±0.18 N/A 0.247±0.00 N/A 0.106±0.07
ENSG00000253813 ENST00000519826 N/A 0.163±0.00 N/A 0.341±0.00 N/A N/A 0.089±0.00 6.516±0.00 0.923±0.13 0.297±0.00 N/A N/A N/A 0.206±0.00

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