C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005U1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123636-ENSG00000136536 CGP 9606 2:159318979-159771027
GeneTranscriptPositionBiotype
ENSG00000224152 (AC009506.1)
 ENST00000418474 (AC009506.1-001) 159615296-159617082 antisense
ENSG00000226266 (AC009961.3)
 ENST00000418770 (AC009961.3-002) 159670712-159712018 lincRNA
ENST00000453016 (AC009961.3-001) 159670708-159712430 lincRNA
ENST00000607836 (AC009961.3-003) 159693201-159712435 lincRNA
ENSG00000230783 (AC009961.2)
 ENST00000449832 (AC009961.2-001) 159689217-159690291 processed_pseudogene
ENSG00000241399 (CD302)
CD302 molecule 		ENST00000259053 (CD302-001) 159768853-159798242 protein_coding
ENST00000429078 (CD302-201) 159768630-159798255 protein_coding
ENST00000480212 (CD302-002) 159768853-159798242 processed_transcript
ENST00000553424 (CD302-202) 159768630-159798255 protein_coding
ENSG00000270893 (RP11-311B14.1)
 ENST00000605196 (RP11-311B14.1-001) 159444117-159444913 processed_pseudogene
CIL_0005U1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026987-ENSMUSG00000026977 CGP 10090 2:59899363-60250676
GeneTranscriptPositionBiotype
ENSMUSG00000026977 (March7)
membrane-associated ring finger (C3HC4) 7 		ENSMUST00000067542 (March7-201) 60224769-60247957 protein_coding
ENSMUST00000102747 (March7-003) 60210073-60247973 protein_coding
ENSMUST00000102748 (March7-001) 60209887-60249211 protein_coding
ENSMUST00000126986 (March7-005) 60243069-60247955 processed_transcript
ENSMUST00000131813 (March7-008) 60232103-60234393 processed_transcript
ENSMUST00000134905 (March7-004) 60236888-60243136 processed_transcript
ENSMUST00000136367 (March7-007) 60247343-60247957 processed_transcript
ENSMUST00000142485 (March7-006) 60236754-60247957 protein_coding
ENSMUST00000143806 (March7-002) 60209913-60250676 processed_transcript
ENSMUSG00000026987 (Baz2b)
bromodomain adjacent to zinc finger domain, 2B 		ENSMUST00000090925 (Baz2b-201) 59899445-60006187 protein_coding
ENSMUST00000112550 (Baz2b-001) 59899363-60125697 protein_coding
ENSMUST00000129124 (Baz2b-009) 59983786-60090070 processed_transcript
ENSMUST00000130637 (Baz2b-005) 59903185-59912536 protein_coding
ENSMUST00000134908 (Baz2b-012) 60206594-60209748 processed_transcript
ENSMUST00000135722 (Baz2b-003) 59953462-59960043 processed_transcript
ENSMUST00000137480 (Baz2b-008) 59978675-60125740 processed_transcript
ENSMUST00000138089 (Baz2b-013) 60206593-60209159 processed_transcript
ENSMUST00000144893 (Baz2b-010) 60076830-60209839 processed_transcript
ENSMUST00000147476 (Baz2b-006) 59916910-59920551 processed_transcript
ENSMUST00000151756 (Baz2b-011) 60206126-60209801 processed_transcript
ENSMUST00000152639 (Baz2b-004) 59914180-59923932 processed_transcript
ENSMUST00000153136 (Baz2b-007) 59924722-59948216 protein_coding
ENSMUST00000153711 (Baz2b-002) 60004549-60125592 processed_transcript
ENSMUSG00000081236 (Gm13574)
predicted gene 13574 		ENSMUST00000120482 (Gm13574-001) 59991951-59992344 processed_pseudogene
ENSMUSG00000082330 (Ldha-ps)
lactate dehydrogenase A, pseudogene 		ENSMUST00000119390 (Ldha-ps-001) 60134055-60135049 processed_pseudogene
ENSMUSG00000085975 (Gm13572)
predicted gene 13572 		ENSMUST00000153675 (Gm13572-001) 60037141-60038837 lincRNA
ENSMUSG00000087181 (Gm13570)
predicted gene 13570 		ENSMUST00000140763 (Gm13570-001) 60098406-60098714 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005U1_0001ENSG00000224152ENST00000418474ENSG00000226266ENST00000418770ENST00000453016ENST00000607836ENSG00000230783ENST00000449832ENSG00000241399ENST00000259053ENST00000429078ENST00000480212ENST00000553424ENSG00000270893ENST00000605196CIL_0005U1_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005U1_0001ENSG00000224152ENST00000418474ENSG00000226266ENST00000418770ENST00000453016ENST00000607836ENSG00000230783ENST00000449832ENSG00000241399ENST00000259053ENST00000429078ENST00000553424ENSG00000270893ENST00000605196CIL_0005U1_0002ENSMUSG00000026977ENSMUST00000067542ENSMUST00000102747ENSMUST00000102748ENSMUST00000126986ENSMUST00000134905ENSMUST00000142485ENSMUST00000143806ENSMUSG00000026987ENSMUST00000090925ENSMUST00000112550ENSMUST00000129124ENSMUST00000130637ENSMUST00000137480ENSMUST00000138089ENSMUST00000147476ENSMUST00000151756ENSMUST00000153136ENSMUSG00000081236ENSMUST00000120482ENSMUSG00000082330ENSMUST00000119390ENSMUSG00000085975ENSMUST00000153675ENSMUSG00000087181ENSMUST00000140763
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000224152 ENST00000418474 N/A N/A N/A N/A N/A N/A 3.996±0.00 N/A N/A N/A N/A N/A N/A 7.644±0.00
ENSG00000226266 ENST00000418770 N/A N/A 1.561±0.00 0.924±0.00 N/A 0.304±0.00 0.326±0.07 1.664±0.00 1.902±0.00 4.065±0.00 N/A 2.203±0.00 0.378±0.00 N/A
ENST00000453016 0.670±0.00 0.512±0.00 N/A 0.265±0.06 0.304±0.11 0.333±0.00 0.310±0.04 0.083±0.00 0.222±0.00 1.023±0.38 0.619±0.00 0.824±0.62 0.385±0.22 2.160±0.60
ENST00000607836 0.021±0.00 0.063±0.00 0.081±0.00 0.029±0.00 0.040±0.00 0.037±0.00 0.034±0.01 0.011±0.00 0.103±0.07 0.095±0.00 N/A 0.083±0.08 0.018±0.00 0.341±0.25
ENSG00000230783 ENST00000449832 0.027±0.00 0.028±0.00 N/A 0.045±0.01 0.102±0.06 0.037±0.00 0.073±0.00 0.067±0.00 0.012±0.00 N/A 0.012±0.00 0.039±0.02 0.023±0.00 0.130±0.00
ENSG00000241399 ENST00000259053 17.613±0.00 5.484±0.00 N/A 3.644±0.00 7.934±0.39 13.781±0.00 3.763±1.99 17.830±9.04 22.138±13.43 16.052±1.91 N/A 6.744±1.55 3.474±0.87 7.550±2.70
ENST00000429078 N/A N/A N/A 2.881±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553424 11.425±0.00 5.901±0.00 2.809±0.00 3.261±0.00 5.306±1.23 6.798±2.49 2.145±0.76 14.730±9.33 14.492±8.03 9.178±0.00 N/A 9.452±1.97 2.152±0.02 10.342±0.00
ENSG00000270893 ENST00000605196 N/A 0.025±0.00 0.083±0.00 0.225±0.00 2.205±0.00 0.293±0.00 0.348±0.00 0.776±0.66 0.442±0.00 1.042±0.00 N/A 0.388±0.48 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026977 ENSMUST00000067542 2.799±0.88 2.177±0.52 N/A N/A 2.600±0.72 4.190±0.61 N/A 1.979±0.59 1.132±0.37 2.596±1.00 N/A 7.294±1.38 N/A 5.916±1.04
ENSMUST00000102747 N/A N/A N/A 4.582±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 8.067±0.00 4.413±2.86
ENSMUST00000102748 4.203±1.21 4.181±1.83 15.712±1.99 15.028±7.63 4.284±0.75 4.067±0.84 3.096±0.17 3.483±0.91 6.423±3.32 5.245±1.88 7.209±0.68 6.322±3.49 13.696±2.27 4.878±1.46
ENSMUST00000126986 1.783±0.30 2.141±0.43 6.964±1.53 10.148±0.48 2.620±0.15 2.576±0.00 1.378±0.14 1.080±0.29 2.496±1.35 3.439±1.14 1.493±0.08 3.663±0.63 4.508±0.60 N/A
ENSMUST00000131813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134905 2.562±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142485 N/A N/A N/A 20.759±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 33.986±5.37 10.600±0.00
ENSMUST00000143806 N/A N/A N/A N/A 0.930±0.01 1.105±0.01 N/A 0.449±0.00 N/A N/A N/A 1.532±0.16 N/A N/A
ENSMUSG00000026987 ENSMUST00000090925 1.220±0.72 1.267±0.44 2.550±0.19 6.085±3.44 1.452±0.36 1.772±0.25 0.510±0.07 1.011±0.30 0.934±0.78 1.490±0.30 0.267±0.00 3.091±2.58 0.935±0.48 3.644±3.21
ENSMUST00000112550 0.730±0.09 1.024±0.12 2.663±0.10 4.332±0.96 1.272±0.00 0.724±0.29 0.706±0.00 0.487±0.00 1.022±0.36 0.965±0.22 0.376±0.00 2.197±1.30 0.614±0.19 1.085±0.15
ENSMUST00000129124 N/A N/A N/A N/A N/A N/A N/A N/A 1.197±0.00 N/A N/A N/A N/A N/A
ENSMUST00000130637 N/A N/A N/A 24.164±0.00 N/A N/A N/A N/A N/A N/A N/A 67.259±0.00 8.651±2.02 114.267±0.00
ENSMUST00000134908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137480 8.156±0.92 7.108±1.07 N/A N/A 6.271±0.93 5.145±0.62 3.997±0.00 6.497±0.83 1.538±0.22 10.100±0.83 N/A 6.566±1.94 N/A N/A
ENSMUST00000138089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.404±0.00 N/A
ENSMUST00000144893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.557±0.00
ENSMUST00000151756 N/A 10.600±3.83 N/A N/A N/A N/A N/A N/A 2.004±0.04 N/A N/A N/A N/A N/A
ENSMUST00000152639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153136 N/A N/A N/A 22.527±0.00 N/A N/A N/A N/A N/A N/A N/A 75.464±0.00 10.550±3.77 106.869±0.00
ENSMUST00000153711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081236 ENSMUST00000120482 N/A N/A 0.137±0.03 0.328±0.03 N/A N/A N/A N/A 0.089±0.05 0.240±0.00 N/A N/A 0.071±0.05 N/A
ENSMUSG00000082330 ENSMUST00000119390 0.065±0.02 0.110±0.01 0.017±0.00 0.081±0.04 0.088±0.00 0.081±0.01 0.047±0.02 0.067±0.03 0.027±0.02 0.073±0.02 0.028±0.00 N/A 0.022±0.00 0.072±0.05
ENSMUSG00000085975 ENSMUST00000153675 0.148±0.02 0.175±0.00 0.216±0.00 0.245±0.18 0.265±0.08 N/A N/A 0.179±0.09 0.267±0.00 0.427±0.32 0.208±0.13 0.238±0.15 0.131±0.00 0.089±0.00
ENSMUSG00000087181 ENSMUST00000140763 1.424±0.37 0.474±0.00 0.351±0.02 0.479±0.09 0.900±0.48 0.567±0.20 N/A 0.403±0.16 0.320±0.30 0.343±0.03 N/A 2.463±1.14 0.199±0.09 57.175±27.05

Loading