C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005UB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148344-ENSG00000136816 CGP 9606 9:129738331-129811281
GeneTranscriptPositionBiotype
ENSG00000136816 (TOR1B)
torsin family 1, member B (torsin B) 		ENST00000259339 (TOR1B-001) 129803153-129811281 protein_coding
ENST00000427860 (TOR1B-003) 129803268-129810518 protein_coding
ENST00000486372 (TOR1B-002) 129803157-129804480 processed_transcript
ENST00000488169 (TOR1B-004) 129804358-129810316 processed_transcript
ENSG00000148344 (PTGES)
prostaglandin E synthase 		ENST00000340607 (PTGES-001) 129738331-129753047 protein_coding
ENST00000481476 (PTGES-002) 129738331-129753019 processed_transcript
ENSG00000233909 (UBE2V1P4)
ubiquitin-conjugating enzyme E2 variant 1 pseudogene 4 		ENST00000425374 (UBE2V1P4-001) 129791196-129791837 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0005UB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050737-ENSMUSG00000026848 CGP 10090 2:30889471-30959015
GeneTranscriptPositionBiotype
ENSMUSG00000026848 (Tor1b)
torsin family 1, member B 		ENSMUST00000028199 (Tor1b-001) 30952959-30959015 protein_coding
ENSMUST00000132514 (Tor1b-006) 30953752-30956873 nonsense_mediated_decay
ENSMUST00000133544 (Tor1b-003) 30952979-30959011 retained_intron
ENSMUST00000135507 (Tor1b-004) 30952991-30956494 nonsense_mediated_decay
ENSMUST00000155213 (Tor1b-005) 30953172-30956985 retained_intron
ENSMUST00000156711 (Tor1b-002) 30953187-30959012 nonsense_mediated_decay
ENSMUSG00000050737 (Ptges)
prostaglandin E synthase 		ENSMUST00000056046 (Ptges-002) 30892282-30901788 protein_coding
ENSMUST00000102852 (Ptges-001) 30889471-30903297 protein_coding
ENSMUST00000126588 (Ptges-003) 30892488-30897469 processed_transcript
ENSMUST00000132244 (Ptges-004) 30892296-30929863 processed_transcript
ENSMUSG00000084143 (Gm13400)
predicted gene 13400 		ENSMUST00000117436 (Gm13400-001) 30923978-30924357 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005UB_0001ENSG00000136816ENST00000259339ENST00000427860ENST00000486372ENST00000488169ENSG00000148344ENST00000340607ENST00000481476ENSG00000233909ENST00000425374CIL_0005UB_0002ENSMUSG00000026848ENSMUST00000028199ENSMUST00000132514ENSMUST00000133544ENSMUST00000135507ENSMUST00000155213ENSMUST00000156711ENSMUSG00000050737ENSMUST00000056046ENSMUST00000102852ENSMUST00000126588ENSMUST00000132244ENSMUSG00000084143ENSMUST00000117436
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005UB_0001ENSG00000136816ENST00000259339ENST00000486372ENSG00000148344ENST00000340607ENST00000481476ENSG00000233909ENST00000425374CIL_0005UB_0002ENSMUSG00000026848ENSMUST00000028199ENSMUST00000132514ENSMUST00000133544ENSMUST00000135507ENSMUST00000156711ENSMUSG00000050737ENSMUST00000056046ENSMUST00000102852ENSMUST00000126588ENSMUST00000132244ENSMUSG00000084143ENSMUST00000117436
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136816 ENST00000259339 6.289±0.00 6.280±0.00 1.501±0.00 1.294±0.21 4.839±0.07 3.490±0.83 2.201±1.73 3.714±0.11 4.309±2.39 2.594±1.38 2.232±1.48 5.302±2.53 10.746±0.61 8.869±0.62
ENST00000427860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486372 N/A N/A N/A N/A 3.775±0.00 N/A N/A N/A 2.511±0.00 N/A N/A N/A N/A N/A
ENST00000488169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000148344 ENST00000340607 31.107±0.00 15.842±0.00 1.392±0.00 0.617±0.06 6.466±4.66 5.580±4.68 0.403±0.38 1.124±1.05 1.203±1.04 3.517±3.18 0.678±0.00 5.191±3.34 101.080±29.88 11.404±4.88
ENST00000481476 N/A 2.361±0.00 N/A 0.435±0.00 N/A N/A N/A 0.935±0.00 N/A 0.902±0.00 N/A N/A N/A N/A
ENSG00000233909 ENST00000425374 N/A N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.062±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026848 ENSMUST00000028199 15.590±1.90 18.153±5.52 14.335±0.68 3.938±0.00 12.705±1.41 11.028±1.99 6.047±0.56 9.292±0.76 7.508±0.88 13.736±0.38 6.079±0.76 15.261±4.21 8.758±4.12 4.489±0.68
ENSMUST00000132514 N/A N/A N/A 7.097±0.00 N/A N/A N/A N/A N/A N/A N/A 25.808±0.00 N/A 6.766±0.00
ENSMUST00000133544 4.738±2.27 4.735±0.31 4.945±0.99 5.836±3.28 4.226±0.69 4.281±1.17 1.907±0.08 2.270±0.32 3.923±1.63 4.032±0.74 1.472±0.16 5.457±1.53 2.531±1.22 1.213±0.51
ENSMUST00000135507 N/A 17.864±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156711 N/A N/A N/A 1.583±0.00 N/A N/A 1.358±0.04 N/A N/A N/A N/A 5.483±0.77 4.738±1.73 0.842±0.00
ENSMUSG00000050737 ENSMUST00000056046 44.091±14.65 18.650±6.14 N/A 0.572±0.09 34.924±2.12 5.239±1.39 0.986±0.36 7.637±1.45 0.321±0.33 11.439±1.55 N/A 29.305±4.36 11.952±12.20 4.696±0.04
ENSMUST00000102852 26.181±7.95 5.305±0.49 20.082±1.05 0.801±0.13 15.928±3.87 3.542±0.96 0.489±0.18 9.072±0.85 0.175±0.26 8.007±0.61 0.502±0.21 26.871±9.59 5.205±3.40 1.001±0.95
ENSMUST00000126588 N/A N/A N/A N/A N/A 6.547±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132244 N/A N/A N/A N/A N/A N/A N/A N/A 0.114±0.03 N/A N/A N/A N/A N/A
ENSMUSG00000084143 ENSMUST00000117436 0.210±0.00 N/A 0.090±0.02 0.096±0.06 N/A 0.267±0.03 N/A N/A 0.185±0.02 0.221±0.00 N/A 0.441±0.19 0.228±0.05 0.155±0.00

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