C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005V8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000079462-ENSG00000188368 CGP 9606 19:42297033-42310821
GeneTranscriptPositionBiotype
ENSG00000079462 (PAFAH1B3)
platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
ENST00000262890 (PAFAH1B3-001) 42297033-42302571 protein_coding
ENST00000538771 (PAFAH1B3-201) 42297033-42302777 protein_coding
ENST00000594989 (PAFAH1B3-007) 42297036-42302292 protein_coding
ENST00000595530 (PAFAH1B3-004) 42297280-42302770 protein_coding
ENST00000596265 (PAFAH1B3-006) 42297316-42302728 protein_coding
ENST00000597333 (PAFAH1B3-005) 42299917-42302496 retained_intron
ENST00000599778 (PAFAH1B3-002) 42300171-42303546 protein_coding
ENST00000601865 (PAFAH1B3-003) 42300089-42302777 protein_coding
ENSG00000188368 (PRR19)
proline rich 19
ENST00000341747 (PRR19-201) 42302132-42310821 protein_coding
ENST00000499536 (PRR19-002) 42308774-42310814 protein_coding
ENST00000595750 (PRR19-003) 42306953-42310288 protein_coding
ENST00000598490 (PRR19-001) 42302098-42310813 protein_coding
CIL_0005V8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005447-ENSMUSG00000058741 CGP 10090 7:25295049-25304133
GeneTranscriptPositionBiotype
ENSMUSG00000005447 (Pafah1b3)
platelet-activating factor acetylhydrolase, isoform 1b, subunit 3
ENSMUST00000005583 (Pafah1b3-001) 25295049-25297986 protein_coding
ENSMUST00000108410 (Pafah1b3-007) 25295049-25297312 protein_coding
ENSMUST00000140093 (Pafah1b3-008) 25295049-25296702 retained_intron
ENSMUST00000148150 (Pafah1b3-005) 25295359-25297882 protein_coding
ENSMUST00000148828 (Pafah1b3-004) 25296620-25297921 retained_intron
ENSMUST00000149634 (Pafah1b3-003) 25296874-25297934 processed_transcript
ENSMUST00000155118 (Pafah1b3-002) 25295966-25297937 protein_coding
ENSMUSG00000058741 (Prr19)
proline rich 19
ENSMUST00000080288 (Prr19-201) 25301359-25304133 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005V8_0001ENSG00000079462ENST00000262890ENST00000538771ENST00000594989ENST00000595530ENST00000596265ENST00000597333ENST00000599778ENST00000601865ENSG00000188368ENST00000341747ENST00000499536ENST00000595750ENST00000598490CIL_0005V8_0002ENSMUSG00000005447ENSMUST00000005583ENSMUST00000108410ENSMUST00000140093ENSMUST00000148150ENSMUST00000148828ENSMUST00000149634ENSMUST00000155118ENSMUSG00000058741ENSMUST00000080288
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005V8_0001ENSG00000079462ENST00000262890ENST00000538771ENST00000594989ENST00000595530ENST00000596265ENST00000599778ENST00000601865ENSG00000188368ENST00000341747ENST00000499536ENST00000595750ENST00000598490CIL_0005V8_0002ENSMUSG00000005447ENSMUST00000005583ENSMUST00000108410ENSMUST00000140093ENSMUST00000148150ENSMUST00000148828ENSMUST00000155118ENSMUSG00000058741ENSMUST00000080288
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000079462 ENST00000262890 1.088±0.00 N/A N/A 6.340±0.00 1.925±0.00 2.310±0.00 0.412±0.00 2.925±0.00 N/A N/A N/A 10.101±4.83 6.994±0.00 N/A
ENST00000538771 N/A 10.003±0.00 N/A 0.854±0.00 0.907±0.07 3.228±0.00 0.258±0.00 N/A N/A 2.835±0.00 N/A 8.283±4.73 4.543±2.67 13.448±3.18
ENST00000594989 1.457±0.00 N/A N/A 7.386±3.03 2.149±0.00 2.398±0.00 N/A 7.531±0.00 2.003±0.00 0.981±0.00 2.481±0.00 N/A 2.754±0.00 16.115±0.00
ENST00000595530 1.240±0.00 N/A 1.164±0.00 1.717±0.00 1.130±0.00 2.881±0.13 N/A 5.641±0.00 N/A N/A 0.986±0.61 9.443±4.61 6.445±3.38 13.823±0.00
ENST00000596265 N/A N/A N/A 1.917±0.00 N/A 2.173±0.00 N/A 0.785±0.00 N/A 0.158±0.00 N/A N/A N/A N/A
ENST00000597333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.559±0.00 N/A N/A
ENST00000601865 N/A N/A 0.154±0.00 N/A N/A 1.021±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188368 ENST00000341747 0.543±0.00 N/A N/A 0.623±0.00 N/A N/A 0.213±0.00 1.669±0.00 0.182±0.00 0.464±0.00 0.722±0.53 2.327±1.30 1.501±0.33 12.830±0.39
ENST00000499536 0.235±0.00 N/A N/A N/A 0.517±0.00 N/A 0.272±0.00 N/A 0.171±0.00 0.208±0.00 N/A N/A N/A N/A
ENST00000595750 N/A N/A N/A N/A N/A N/A N/A 0.974±0.00 N/A N/A N/A N/A N/A N/A
ENST00000598490 N/A 2.914±0.00 N/A N/A N/A 0.438±0.00 N/A N/A N/A 0.280±0.00 N/A N/A 1.396±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005447 ENSMUST00000005583 12.253±10.42 9.059±2.29 17.974±1.31 91.615±59.25 8.421±1.97 50.629±3.95 1.930±0.74 12.311±1.37 10.914±10.28 15.592±1.04 0.360±0.34 28.446±12.41 25.943±11.97 14.220±1.78
ENSMUST00000108410 1.739±0.33 5.423±2.18 N/A 70.891±43.85 9.700±2.27 49.878±8.13 1.160±0.57 9.714±1.93 3.489±1.61 5.983±0.33 0.212±0.12 34.705±4.64 17.582±7.46 5.476±0.05
ENSMUST00000140093 N/A 2.343±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.146±0.05 N/A N/A N/A
ENSMUST00000148150 2.598±2.00 3.206±1.11 6.053±0.00 45.124±27.83 3.342±1.05 12.831±1.37 0.454±0.00 N/A 4.212±0.77 3.602±0.75 0.196±0.08 11.743±4.66 9.816±2.40 4.523±0.95
ENSMUST00000148828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.01 N/A N/A N/A
ENSMUST00000149634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A 8.414±0.77 N/A
ENSMUSG00000058741 ENSMUST00000080288 0.060±0.04 N/A 0.012±0.00 0.742±0.03 0.046±0.03 0.041±0.01 N/A 0.035±0.02 0.029±0.01 0.029±0.01 N/A 0.084±0.05 0.126±0.10 26.920±1.53

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