C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005VP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000108106-ENSG00000187902 CGP 9606 19:55399745-55442863
GeneTranscriptPositionBiotype
ENSG00000108106 (UBE2S)
ubiquitin-conjugating enzyme E2S
ENST00000264552 (UBE2S-001) 55399745-55407777 protein_coding
ENST00000587845 (UBE2S-002) 55401579-55407719 protein_coding
ENST00000589978 (UBE2S-003) 55401714-55407771 protein_coding
ENST00000592570 (UBE2S-004) 55403908-55404144 processed_transcript
ENSG00000187902 (SHISA7)
shisa family member 7
ENST00000376325 (SHISA7-002) 55428740-55442863 protein_coding
ENST00000416792 (SHISA7-001) 55431976-55442337 protein_coding
CIL_0005VP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000060860-ENSMUSG00000053550 CGP 10090 7:4808155-4844696
GeneTranscriptPositionBiotype
ENSMUSG00000053550 (Shisa7)
shisa family member 7
ENSMUST00000066041 (Shisa7-201) 4825553-4844696 protein_coding
ENSMUST00000117452 (Shisa7-001) 4825552-4836174 protein_coding
ENSMUST00000119433 (Shisa7-002) 4828027-4836723 protein_coding
ENSMUST00000132806 (Shisa7-003) 4831391-4834515 retained_intron
ENSMUST00000157068 (Shisa7-004) 4830177-4831127 retained_intron
ENSMUST00000172377 (Shisa7-202) 4825553-4844696 protein_coding
ENSMUSG00000060860 (Ube2s)
ubiquitin-conjugating enzyme E2S
ENSMUST00000079496 (Ube2s-201) 4808155-4812351 protein_coding
ENSMUSG00000084815 (Gm15525)
predicted gene 15525
ENSMUST00000132587 (Gm15525-001) 4836467-4844696 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005VP_0001ENSG00000108106ENST00000264552ENST00000587845ENST00000589978ENST00000592570ENSG00000187902ENST00000376325ENST00000416792CIL_0005VP_0002ENSMUSG00000053550ENSMUST00000066041ENSMUST00000117452ENSMUST00000119433ENSMUST00000132806ENSMUST00000157068ENSMUST00000172377ENSMUSG00000060860ENSMUST00000079496ENSMUSG00000084815ENSMUST00000132587
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005VP_0001ENSG00000108106ENST00000264552ENST00000587845ENST00000589978ENSG00000187902ENST00000376325ENST00000416792CIL_0005VP_0002ENSMUSG00000053550ENSMUST00000066041ENSMUST00000117452ENSMUST00000119433ENSMUST00000157068ENSMUST00000172377ENSMUSG00000060860ENSMUST00000079496ENSMUSG00000084815ENSMUST00000132587
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108106 ENST00000264552 0.513±0.00 0.726±0.00 0.281±0.00 1.176±0.45 0.432±0.10 0.497±0.12 0.351±0.10 0.525±0.03 0.420±0.06 0.694±0.40 0.205±0.00 1.471±0.97 3.861±0.00 9.729±3.88
ENST00000587845 0.715±0.00 N/A N/A N/A 1.199±0.00 1.844±0.00 0.910±0.00 1.133±0.00 N/A N/A 0.974±0.20 N/A N/A 7.125±0.00
ENST00000589978 2.407±0.00 3.475±0.00 N/A 5.772±0.00 1.942±0.00 4.570±0.00 2.669±2.20 3.303±2.71 3.769±0.00 4.517±3.74 2.088±0.69 8.693±6.83 8.593±0.00 45.713±11.45
ENST00000592570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187902 ENST00000376325 0.007±0.00 0.062±0.00 N/A 1.886±0.68 0.034±0.00 0.119±0.00 N/A 0.012±0.00 N/A N/A N/A 0.060±0.04 0.012±0.00 1.013±0.55
ENST00000416792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000053550 ENSMUST00000066041 N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A 0.018±0.00 N/A N/A 0.243±0.00 N/A N/A
ENSMUST00000117452 0.033±0.03 N/A 0.230±0.00 19.165±10.38 0.091±0.04 0.380±0.16 0.018±0.01 1.753±0.86 0.019±0.01 0.507±0.23 0.014±0.01 0.641±0.34 0.226±0.12 3.507±2.17
ENSMUST00000119433 0.168±0.09 0.355±0.12 0.185±0.02 4.426±0.00 0.035±0.00 0.310±0.12 0.019±0.01 N/A 0.043±0.01 0.365±0.06 0.039±0.00 0.277±0.10 1.324±1.01 2.079±0.00
ENSMUST00000132806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000157068 N/A N/A N/A 51.937±0.00 N/A N/A N/A N/A N/A N/A 0.181±0.00 1.443±0.00 6.841±4.41 N/A
ENSMUST00000172377 N/A 0.722±0.00 N/A 16.715±1.05 0.051±0.02 0.271±0.15 N/A 2.173±0.40 0.017±0.01 0.278±0.12 N/A 0.487±0.18 N/A N/A
ENSMUSG00000060860 ENSMUST00000079496 82.527±7.93 88.711±22.82 56.127±7.24 124.890±73.89 74.421±9.31 97.408±15.24 50.304±2.58 88.074±9.06 146.910±132.32 70.381±8.32 45.371±3.37 136.680±41.73 134.924±40.81 439.908±84.18
ENSMUSG00000084815 ENSMUST00000132587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.760±0.00 N/A N/A

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