C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005VR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000071439-ENSDARG00000090356 CGP 7955 22:24991113-25087130
GeneTranscriptPositionBiotype
ENSDARG00000071439 (C22H1orf53)
chromosome 1 open reading frame 53 		ENSDART00000105613 (C22H1orf53-001) 24991113-24994384 protein_coding
ENSDARG00000090356 (DENND1B (2 of 2))
DENN/MADD domain containing 1B 		ENSDART00000122451 (DENND1B (2 of 2)-201) 25001745-25087130 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005VR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000079283-ENSMUSG00000056268 CGP 10090 1:138851979-139176043
GeneTranscriptPositionBiotype
ENSMUSG00000079283 (2310009B15Rik)
RIKEN cDNA 2310009B15 gene 		ENSMUST00000112025 (2310009B15Rik-201) 138851979-138856854 protein_coding
ENSMUSG00000085361 (Gm16305)
predicted gene 16305 		ENSMUST00000140747 (Gm16305-001) 138991550-138992021 unprocessed_pseudogene
ENSMUSG00000086113 (4930596I21Rik)
 ENSMUST00000152856 (4930596I21Rik-001) 138977657-138979240 sense_intronic
ENSMUSG00000099808 (RP24-214P19.1)
RIKEN cDNA 1700019P21 gene 		ENSMUST00000186955 (RP24-214P19.1-001) 138876272-138876950 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005VR_0001ENSDARG00000071439ENSDART00000105613ENSDARG00000090356ENSDART00000122451CIL_0005VR_0002ENSMUSG00000079283ENSMUST00000112025ENSMUSG00000085361ENSMUST00000140747ENSMUSG00000086113ENSMUST00000152856ENSMUSG00000099808ENSMUST00000186955
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005VR_0001ENSDARG00000071439ENSDART00000105613ENSDARG00000090356ENSDART00000122451CIL_0005VR_0002ENSMUSG00000079283ENSMUST00000112025ENSMUSG00000085361ENSMUST00000140747ENSMUSG00000086113ENSMUST00000152856ENSMUSG00000099808ENSMUST00000186955
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000071439 ENSDART00000105613 N/A N/A N/A 1.305±0.31 N/A N/A 1.037±0.42 2.564±0.00 N/A N/A 1.867±0.00 N/A N/A N/A
ENSDARG00000090356 ENSDART00000122451 N/A N/A N/A 39.464±35.25 N/A N/A 32.413±0.00 53.046±0.00 N/A N/A 0.336±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000079283 ENSMUST00000112025 7.638±2.22 11.099±4.35 8.937±1.16 10.257±6.87 9.453±4.55 10.537±3.54 4.629±1.01 8.089±2.01 7.032±2.77 6.500±0.72 10.044±1.18 9.794±3.56 6.145±2.41 2.882±1.34
ENSMUSG00000085361 ENSMUST00000140747 0.160±0.06 0.248±0.00 N/A 0.605±0.04 0.206±0.07 0.250±0.10 0.122±0.04 0.288±0.12 0.195±0.08 0.273±0.10 N/A 0.660±0.19 0.160±0.00 0.206±0.10
ENSMUSG00000086113 ENSMUST00000152856 N/A N/A 0.171±0.00 N/A N/A N/A N/A 0.133±0.00 0.020±0.00 N/A 0.063±0.00 0.191±0.08 0.145±0.05 1.594±0.65
ENSMUSG00000099808 ENSMUST00000186955 N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.406±1.23

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