C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005VZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070606-ENSDARG00000032161 CGP 7955 11:22197809-22418377
GeneTranscriptPositionBiotype
ENSDARG00000032161 (srgap2a)
SLIT-ROBO Rho GTPase activating protein 2a 		ENSDART00000045391 (srgap2a-201) 22239998-22416104 protein_coding
ENSDART00000103865 (srgap2a-001) 22242498-22418377 protein_coding
ENSDART00000138665 (srgap2a-002) 22413127-22418362 processed_transcript
ENSDARG00000070606 (ikbke)
inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon 		ENSDART00000080116 (ikbke-201) 22199808-22237245 protein_coding
ENSDART00000129062 (ikbke-202) 22197809-22230137 protein_coding
CIL_0005VZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042349-ENSMUSG00000026425 CGP 10090 1:131254343-131527352
GeneTranscriptPositionBiotype
ENSMUSG00000026425 (Srgap2)
SLIT-ROBO Rho GTPase activating protein 2 		ENSMUST00000097588 (Srgap2-001) 131285251-131527347 protein_coding
ENSMUST00000185445 (Srgap2-009) 131411800-131514232 protein_coding
ENSMUST00000185596 (Srgap2-005) 131296641-131364064 protein_coding
ENSMUST00000186543 (Srgap2-004) 131295218-131527347 protein_coding
ENSMUST00000187042 (Srgap2-012) 131289358-131300453 protein_coding
ENSMUST00000187273 (Srgap2-010) 131436675-131504366 protein_coding
ENSMUST00000188437 (Srgap2-011) 131319535-131332263 retained_intron
ENSMUST00000188604 (Srgap2-013) 131295756-131296380 processed_transcript
ENSMUST00000188770 (Srgap2-006) 131295221-131344547 protein_coding
ENSMUST00000189892 (Srgap2-008) 131295219-131311065 processed_transcript
ENSMUST00000189893 (Srgap2-002) 131362026-131527352 retained_intron
ENSMUST00000190336 (Srgap2-007) 131294988-131333070 processed_transcript
ENSMUSG00000042349 (Ikbke)
inhibitor of kappaB kinase epsilon 		ENSMUST00000062108 (Ikbke-001) 131254597-131279606 protein_coding
ENSMUST00000159195 (Ikbke-004) 131273791-131276713 protein_coding
ENSMUST00000160748 (Ikbke-007) 131259020-131266288 retained_intron
ENSMUST00000161764 (Ikbke-002) 131254602-131276951 protein_coding
ENSMUST00000162285 (Ikbke-005) 131270901-131272541 retained_intron
ENSMUST00000162437 (Ikbke-003) 131254343-131265131 retained_intron
ENSMUST00000163029 (Ikbke-006) 131263339-131270544 retained_intron
ENSMUSG00000099959 (RP24-302F18.1)
predicted gene 29487 		ENSMUST00000190146 (RP24-302F18.1-001) 131447440-131447695 processed_pseudogene
ENSMUSG00000101778 (RP24-302F18.2)
predicted gene 29488 		ENSMUST00000191427 (RP24-302F18.2-001) 131406812-131409213 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005VZ_0001ENSDARG00000032161ENSDART00000045391ENSDART00000103865ENSDART00000138665ENSDARG00000070606ENSDART00000080116ENSDART00000129062CIL_0005VZ_0002ENSMUSG00000026425ENSMUST00000097588ENSMUST00000185445ENSMUST00000185596ENSMUST00000186543ENSMUST00000187042ENSMUST00000187273ENSMUST00000188437ENSMUST00000188604ENSMUST00000188770ENSMUST00000189892ENSMUST00000189893ENSMUST00000190336ENSMUSG00000042349ENSMUST00000062108ENSMUST00000159195ENSMUST00000160748ENSMUST00000161764ENSMUST00000162285ENSMUST00000162437ENSMUST00000163029ENSMUSG00000099959ENSMUST00000190146ENSMUSG00000101778ENSMUST00000191427
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005VZ_0001ENSDARG00000032161ENSDART00000045391ENSDART00000103865ENSDARG00000070606ENSDART00000080116ENSDART00000129062CIL_0005VZ_0002ENSMUSG00000026425ENSMUST00000097588ENSMUST00000186543ENSMUST00000187042ENSMUST00000188770ENSMUSG00000042349ENSMUST00000062108ENSMUST00000159195ENSMUST00000160748ENSMUST00000161764ENSMUST00000162437ENSMUST00000163029ENSMUSG00000099959ENSMUST00000190146ENSMUSG00000101778ENSMUST00000191427
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000032161 ENSDART00000045391 N/A N/A N/A 7.379±5.82 N/A N/A N/A N/A 0.094±0.00 N/A 1.052±0.00 N/A N/A N/A
ENSDART00000103865 N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A
ENSDART00000138665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000070606 ENSDART00000080116 N/A N/A N/A 0.390±0.00 N/A N/A 1.294±0.00 2.530±0.00 0.140±0.00 N/A N/A N/A N/A N/A
ENSDART00000129062 N/A N/A N/A 1.233±0.00 N/A N/A 2.225±1.12 2.854±0.00 0.098±0.00 N/A 0.133±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026425 ENSMUST00000097588 2.919±0.03 1.922±0.45 1.094±0.00 3.056±1.05 3.035±1.38 1.427±0.67 1.638±0.49 1.823±0.53 1.104±0.92 5.088±1.36 0.927±0.22 2.904±1.01 3.147±3.37 1.378±0.50
ENSMUST00000185445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186543 3.170±0.00 2.212±0.00 3.478±0.00 9.550±0.00 3.026±1.24 1.304±0.62 1.224±0.00 1.859±0.34 1.482±0.98 3.489±0.00 1.183±0.15 2.667±0.89 7.825±5.62 2.640±1.22
ENSMUST00000187042 N/A 4.019±0.73 N/A N/A N/A 2.377±0.37 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188770 5.823±1.23 4.442±0.48 N/A N/A 4.039±0.54 1.164±0.28 2.509±0.68 2.153±0.19 1.519±0.50 7.518±0.65 1.189±0.19 3.850±1.16 3.709±2.12 1.334±0.14
ENSMUST00000189892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042349 ENSMUST00000062108 6.734±1.57 4.060±0.90 10.343±0.71 0.267±0.08 12.496±3.88 15.490±1.19 0.763±0.21 2.293±0.58 2.154±0.86 4.016±0.42 0.277±0.18 4.949±1.38 1.061±0.68 0.364±0.15
ENSMUST00000159195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.553±0.00 0.590±0.00
ENSMUST00000160748 N/A N/A N/A 0.289±0.00 N/A N/A N/A N/A N/A N/A 0.174±0.00 N/A N/A 0.144±0.00
ENSMUST00000161764 N/A N/A 1.264±0.00 N/A N/A N/A 0.298±0.00 0.829±0.00 4.084±1.34 N/A 0.095±0.00 1.734±0.50 0.530±0.45 0.108±0.03
ENSMUST00000162285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162437 0.849±0.00 N/A 1.018±0.13 0.063±0.02 1.314±0.00 N/A 0.098±0.00 N/A N/A N/A 0.036±0.02 0.878±0.01 0.069±0.04 0.067±0.03
ENSMUST00000163029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.429±0.00 N/A
ENSMUSG00000099959 ENSMUST00000190146 0.495±0.00 N/A 0.094±0.00 0.152±0.04 0.831±0.36 N/A N/A N/A N/A 0.607±0.00 N/A 0.563±0.00 N/A 0.383±0.00
ENSMUSG00000101778 ENSMUST00000191427 0.069±0.04 N/A 0.045±0.03 0.118±0.09 0.120±0.13 N/A 0.032±0.03 0.047±0.03 0.038±0.01 0.128±0.08 N/A 0.109±0.09 0.077±0.05 0.054±0.03

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