C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005WT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168234-ENSG00000154040 CGP 9606 18:23992773-24161603
GeneTranscriptPositionBiotype
ENSG00000206863 (RNU5A-6P)
RNA, U5A small nuclear 6, pseudogene
ENST00000384136 (RNU5A-6P-201) 24124170-24124285 snRNA
ENSG00000264745 (RP11-403A21.2)
TTC39C antisense RNA 1
ENST00000579713 (RP11-403A21.2-001) 23994213-24015339 antisense
ENSG00000264924 (RP11-799B12.2)
ENST00000583782 (RP11-799B12.2-001) 24113637-24121003 antisense
ENSG00000265204 (RP11-403A21.3)
ENST00000578443 (RP11-403A21.3-001) 24076794-24099320 antisense
ENSG00000265750 (RP11-799B12.4)
ENST00000583267 (RP11-799B12.4-001) 24159509-24162211 lincRNA
CIL_0005WT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024424-ENSMUSG00000024430 CGP 10090 18:12599926-12755146
GeneTranscriptPositionBiotype
ENSMUSG00000024424 (Ttc39c)
tetratricopeptide repeat domain 39C
ENSMUST00000025294 (Ttc39c-001) 12643344-12737049 protein_coding
ENSMUST00000141060 (Ttc39c-002) 12643344-12689445 retained_intron
ENSMUST00000143388 (Ttc39c-003) 12734705-12736830 retained_intron
ENSMUST00000169401 (Ttc39c-004) 12599926-12737050 protein_coding
ENSMUSG00000024430 (Cabyr)
calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
ENSMUST00000080415 (Cabyr-002) 12741347-12755140 nonsense_mediated_decay
ENSMUST00000115857 (Cabyr-001) 12741324-12755146 protein_coding
ENSMUST00000119108 (Cabyr-005) 12741355-12755142 protein_coding
ENSMUST00000121018 (Cabyr-004) 12741349-12755140 protein_coding
ENSMUST00000150758 (Cabyr-003) 12741355-12755142 nonsense_mediated_decay
ENSMUST00000186263 (Cabyr-201) 12741355-12755142 protein_coding
ENSMUST00000191078 (Cabyr-202) 12741355-12755142 protein_coding
ENSMUSG00000083332 (Gm7599)
predicted gene 7599
ENSMUST00000121453 (Gm7599-001) 12742464-12743259 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005WT_0001ENSG00000206863ENST00000384136ENSG00000264745ENST00000579713ENSG00000264924ENST00000583782ENSG00000265204ENST00000578443ENSG00000265750ENST00000583267CIL_0005WT_0002ENSMUSG00000024424ENSMUST00000025294ENSMUST00000141060ENSMUST00000143388ENSMUST00000169401ENSMUSG00000024430ENSMUST00000080415ENSMUST00000115857ENSMUST00000119108ENSMUST00000121018ENSMUST00000150758ENSMUST00000186263ENSMUST00000191078ENSMUSG00000083332ENSMUST00000121453
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005WT_0001ENSG00000206863ENST00000384136ENSG00000264745ENST00000579713ENSG00000264924ENST00000583782ENSG00000265204ENST00000578443ENSG00000265750ENST00000583267CIL_0005WT_0002ENSMUSG00000024424ENSMUST00000025294ENSMUST00000141060ENSMUST00000143388ENSMUST00000169401ENSMUSG00000024430ENSMUST00000080415ENSMUST00000115857ENSMUST00000119108ENSMUST00000121018ENSMUST00000186263ENSMUST00000191078ENSMUSG00000083332ENSMUST00000121453
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000206863 ENST00000384136 N/A 0.306±0.00 N/A 0.310±0.00 N/A N/A N/A N/A 0.500±0.00 N/A N/A N/A N/A N/A
ENSG00000264745 ENST00000579713 0.015±0.00 0.766±0.00 N/A 0.214±0.00 N/A 0.053±0.00 N/A 0.116±0.00 0.116±0.00 0.397±0.00 N/A 0.107±0.08 N/A 1.872±1.12
ENSG00000264924 ENST00000583782 N/A N/A N/A N/A N/A 4.169±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000265204 ENST00000578443 N/A 0.081±0.00 N/A 0.055±0.00 0.376±0.00 N/A N/A 0.081±0.00 N/A N/A N/A N/A N/A 0.134±0.04
ENSG00000265750 ENST00000583267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 79.962±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024424 ENSMUST00000025294 4.160±0.80 8.792±4.70 0.909±0.27 2.720±0.44 2.877±1.24 0.667±0.24 0.370±0.10 3.425±1.06 8.842±6.94 1.011±0.31 0.414±0.16 4.559±2.92 0.752±0.36 6.458±3.29
ENSMUST00000141060 N/A N/A N/A N/A N/A 0.124±0.04 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143388 N/A N/A N/A N/A N/A N/A 1.301±0.00 N/A N/A 1.823±0.00 N/A N/A 1.724±0.46 N/A
ENSMUST00000169401 2.902±1.49 N/A 1.839±0.14 4.304±2.23 2.369±1.15 N/A 0.641±0.04 2.880±0.21 2.679±1.97 0.803±0.31 0.359±0.09 6.031±2.19 2.023±1.09 10.692±1.94
ENSMUSG00000024430 ENSMUST00000080415 0.094±0.05 0.021±0.00 N/A 1.682±0.00 0.055±0.03 N/A N/A N/A 0.107±0.00 0.018±0.00 0.042±0.02 0.175±0.08 0.115±0.06 N/A
ENSMUST00000115857 0.120±0.00 0.032±0.00 N/A N/A 0.136±0.03 0.097±0.06 N/A N/A N/A 0.061±0.05 0.025±0.01 0.303±0.12 0.121±0.00 59.458±20.46
ENSMUST00000119108 N/A 0.132±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.181±0.00 N/A N/A
ENSMUST00000121018 0.173±0.00 N/A N/A 0.922±1.03 0.181±0.00 N/A 0.144±0.00 N/A 0.066±0.03 0.130±0.11 0.129±0.03 0.311±0.21 0.042±0.00 104.987±21.91
ENSMUST00000150758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186263 0.101±0.05 0.118±0.05 0.249±0.01 0.437±0.08 0.172±0.09 0.110±0.01 N/A 0.113±0.00 0.193±0.06 0.077±0.06 0.043±0.02 0.195±0.09 0.114±0.07 32.864±1.63
ENSMUST00000191078 N/A N/A N/A N/A N/A N/A 0.087±0.04 N/A 0.059±0.00 0.067±0.00 N/A 0.123±0.00 N/A N/A
ENSMUSG00000083332 ENSMUST00000121453 0.071±0.00 N/A 0.024±0.01 0.269±0.09 0.273±0.08 N/A 0.072±0.00 0.088±0.01 0.015±0.01 0.103±0.00 0.036±0.00 0.169±0.16 0.011±0.00 0.734±0.45

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