C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005X4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148153-ENSG00000148158 CGP 9606 9:112683926-112881671
GeneTranscriptPositionBiotype
ENSG00000148153 (INIP)
INTS3 and NABP interacting protein 		ENST00000374234 (INIP-003) 112687145-112718107 protein_coding
ENST00000374236 (INIP-002) 112687117-112718149 protein_coding
ENST00000374242 (INIP-001) 112683926-112718236 protein_coding
ENST00000476599 (INIP-006) 112694034-112718117 processed_transcript
ENST00000481146 (INIP-004) 112687132-112718086 processed_transcript
ENST00000497712 (INIP-005) 112687097-112718089 processed_transcript
ENSG00000148158 (SNX30)
sorting nexin family member 30 		ENST00000374232 (SNX30-001) 112750838-112874987 protein_coding
ENST00000416585 (SNX30-002) 112838585-112866525 protein_coding
ENST00000604751 (SNX30-003) 112856708-112881671 processed_transcript
ENSG00000226609 (RP11-276E15.4)
 ENST00000440009 (RP11-276E15.4-001) 112748902-112750456 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0005X4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038544-ENSMUSG00000028385 CGP 10090 4:59769637-59904737
GeneTranscriptPositionBiotype
ENSMUSG00000028385 (Snx30)
sorting nexin family member 30 		ENSMUST00000030080 (Snx30-001) 59805840-59904737 protein_coding
ENSMUST00000123665 (Snx30-004) 59805880-59834106 processed_transcript
ENSMUST00000143185 (Snx30-003) 59884780-59894554 processed_transcript
ENSMUST00000145199 (Snx30-002) 59884694-59900533 processed_transcript
ENSMUSG00000038544 (Inip)
INTS3 and NABP interacting protein 		ENSMUST00000095063 (Inip-001) 59769637-59783866 protein_coding
ENSMUST00000107526 (Inip-004) 59771297-59783808 protein_coding
ENSMUST00000128548 (Inip-002) 59774088-59783838 processed_transcript
ENSMUST00000138097 (Inip-003) 59781007-59783849 processed_transcript
ENSMUST00000143756 (Inip-005) 59772372-59801589 protein_coding
ENSMUSG00000073843 (Gm12542)
predicted gene 12542 		ENSMUST00000133015 (Gm12542-001) 59889986-59894924 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005X4_0001ENSG00000148153ENST00000374234ENST00000374236ENST00000374242ENST00000476599ENST00000481146ENST00000497712ENSG00000148158ENST00000374232ENST00000416585ENST00000604751ENSG00000226609ENST00000440009CIL_0005X4_0002ENSMUSG00000028385ENSMUST00000030080ENSMUST00000123665ENSMUST00000143185ENSMUST00000145199ENSMUSG00000038544ENSMUST00000095063ENSMUST00000107526ENSMUST00000128548ENSMUST00000138097ENSMUST00000143756ENSMUSG00000073843ENSMUST00000133015
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005X4_0001ENSG00000148153ENST00000374234ENST00000374236ENST00000374242ENST00000481146ENST00000497712ENSG00000148158ENST00000374232ENSG00000226609ENST00000440009CIL_0005X4_0002ENSMUSG00000028385ENSMUST00000030080ENSMUST00000123665ENSMUST00000145199ENSMUSG00000038544ENSMUST00000095063ENSMUST00000107526ENSMUST00000128548ENSMUSG00000073843ENSMUST00000133015
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148153 ENST00000374234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.652±0.00 N/A N/A N/A
ENST00000374236 N/A N/A N/A N/A N/A 2.047±0.00 N/A N/A N/A 0.996±0.00 0.319±0.00 3.759±0.00 3.201±0.00 4.415±0.00
ENST00000374242 1.129±0.00 1.074±0.00 N/A 3.513±2.43 2.130±1.18 1.345±0.64 1.944±0.00 1.682±1.42 1.570±0.00 0.933±0.00 0.308±0.00 3.072±0.20 2.034±0.42 1.622±0.08
ENST00000476599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.834±0.00 N/A N/A
ENST00000497712 N/A 2.681±0.00 N/A N/A N/A N/A N/A N/A N/A 1.340±0.00 N/A N/A 1.651±0.00 N/A
ENSG00000148158 ENST00000374232 2.369±0.00 0.614±0.00 2.510±0.00 8.220±3.19 1.804±0.96 2.538±1.01 0.650±0.29 2.640±1.50 1.688±0.23 5.370±1.46 0.652±0.00 1.964±0.68 0.768±0.61 7.383±1.26
ENST00000416585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226609 ENST00000440009 N/A N/A N/A 0.302±0.00 N/A N/A N/A 0.086±0.00 0.127±0.00 0.640±0.00 0.264±0.00 0.081±0.00 N/A 0.294±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028385 ENSMUST00000030080 1.929±0.72 1.130±0.24 2.471±0.37 4.245±0.24 3.543±1.41 1.734±0.18 0.628±0.14 2.753±0.65 1.343±0.39 2.242±1.43 0.464±0.18 2.275±0.68 8.381±3.02 0.369±0.14
ENSMUST00000123665 N/A 1.453±0.26 N/A N/A N/A 1.523±0.00 N/A N/A N/A N/A N/A 1.916±0.19 N/A N/A
ENSMUST00000143185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.272±0.00
ENSMUSG00000038544 ENSMUST00000095063 2.532±1.68 6.487±0.71 3.236±0.01 5.589±2.48 4.417±1.20 3.869±0.85 1.867±0.46 1.755±0.61 1.828±0.94 5.100±0.56 0.662±0.11 5.770±2.13 2.615±0.72 1.510±0.40
ENSMUST00000107526 N/A N/A N/A N/A N/A N/A N/A 1.047±0.00 2.616±0.58 N/A 0.363±0.04 2.668±0.65 2.034±1.05 1.477±0.52
ENSMUST00000128548 N/A N/A 2.459±0.43 3.048±0.92 1.869±0.00 N/A 1.005±0.07 N/A 1.494±0.58 N/A 0.362±0.09 2.150±0.84 1.093±0.20 0.712±0.31
ENSMUST00000138097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000073843 ENSMUST00000133015 0.086±0.04 N/A 0.117±0.10 0.129±0.08 0.253±0.08 0.110±0.01 0.338±0.05 0.087±0.03 0.062±0.04 0.126±0.05 0.082±0.00 0.257±0.07 0.258±0.12 0.058±0.00

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