C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005YM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000041511-ENSDARG00000059960 CGP 7955 8:49475943-49781488
GeneTranscriptPositionBiotype
ENSDARG00000041511 (pex10)
peroxisome biogenesis factor 10 		ENSDART00000060853 (pex10-001) 49475943-49485894 protein_coding
ENSDARG00000059960 (plch2a)
phospholipase C, eta 2a 		ENSDART00000007624 (plch2a-201) 49514203-49776300 protein_coding
ENSDART00000131460 (plch2a-001) 49730242-49781488 protein_coding
ENSDART00000141372 (plch2a-002) 49766840-49779822 processed_transcript

Danio rerio Ensembl (Zv9)

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CIL_0005YM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000157911-ENSG00000149527 CGP 9606 1:2403964-2505530
GeneTranscriptPositionBiotype
ENSG00000149527 (PLCH2)
phospholipase C, eta 2 		ENST00000278878 (PLCH2-002) 2479888-2505276 protein_coding
ENST00000343889 (PLCH2-001) 2479090-2505530 retained_intron
ENST00000378486 (PLCH2-201) 2476315-2505525 protein_coding
ENST00000419816 (PLCH2-009) 2476315-2505525 protein_coding
ENST00000449969 (PLCH2-008) 2467459-2505526 protein_coding
ENST00000462379 (PLCH2-006) 2498647-2505528 retained_intron
ENST00000473964 (PLCH2-005) 2497782-2505528 retained_intron
ENST00000609981 (PLCH2-010) 2425980-2479804 protein_coding
ENSG00000157911 (PEX10)
peroxisomal biogenesis factor 10 		ENST00000288774 (PEX10-001) 2403964-2412530 protein_coding
ENST00000447513 (PEX10-002) 2404819-2412571 protein_coding
ENST00000502666 (PEX10-008) 2408604-2410836 nonsense_mediated_decay
ENST00000504111 (PEX10-007) 2408635-2410873 processed_transcript
ENST00000507596 (PEX10-003) 2404838-2412540 protein_coding
ENST00000508384 (PEX10-004) 2408530-2413797 protein_coding
ENST00000510434 (PEX10-005) 2406518-2412535 nonsense_mediated_decay
ENST00000514502 (PEX10-006) 2408755-2412514 nonsense_mediated_decay
ENST00000515760 (PEX10-009) 2408583-2410004 processed_transcript
ENSG00000157916 (RER1)
retention in endoplasmic reticulum sorting receptor 1 		ENST00000306256 (RER1-008) 2391843-2403064 protein_coding
ENST00000378512 (RER1-002) 2391890-2403751 protein_coding
ENST00000378513 (RER1-201) 2391775-2405442 protein_coding
ENST00000378518 (RER1-004) 2391828-2402325 protein_coding
ENST00000443438 (RER1-006) 2393174-2402316 protein_coding
ENST00000462129 (RER1-007) 2401951-2403227 retained_intron
ENST00000488353 (RER1-003) 2394005-2403216 protein_coding
ENST00000493207 (RER1-005) 2391857-2396367 retained_intron
ENST00000605895 (RER1-001) 2391833-2405444 protein_coding
ENSG00000224387 (RP3-395M20.2)
 ENST00000424657 (RP3-395M20.2-001) 2492300-2493258 antisense
ENSG00000229393 (RP3-395M20.3)
 ENST00000442305 (RP3-395M20.3-001) 2493437-2494479 antisense

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YM_0001ENSDARG00000041511ENSDART00000060853ENSDARG00000059960ENSDART00000007624ENSDART00000131460ENSDART00000141372CIL_0005YM_0002ENSG00000149527ENST00000278878ENST00000343889ENST00000378486ENST00000419816ENST00000449969ENST00000462379ENST00000473964ENST00000609981ENSG00000157911ENST00000288774ENST00000447513ENST00000502666ENST00000504111ENST00000507596ENST00000508384ENST00000510434ENST00000514502ENST00000515760ENSG00000157916ENST00000306256ENST00000378512ENST00000378513ENST00000378518ENST00000443438ENST00000462129ENST00000488353ENST00000493207ENST00000605895ENSG00000224387ENST00000424657ENSG00000229393ENST00000442305
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YM_0001ENSDARG00000041511ENSDART00000060853ENSDARG00000059960ENSDART00000007624ENSDART00000131460ENSDART00000141372CIL_0005YM_0002ENSG00000149527ENST00000278878ENST00000343889ENST00000378486ENST00000419816ENST00000449969ENST00000462379ENST00000609981ENSG00000157911ENST00000288774ENST00000447513ENSG00000157916ENST00000306256ENST00000378512ENST00000378513ENST00000378518ENST00000443438ENST00000605895ENSG00000224387ENST00000424657ENSG00000229393ENST00000442305
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000041511 ENSDART00000060853 N/A N/A N/A 1.465±0.49 N/A N/A 1.117±0.27 2.086±0.15 1.142±0.00 N/A 0.472±0.00 N/A N/A N/A
ENSDARG00000059960 ENSDART00000007624 N/A N/A N/A 8.214±0.00 N/A N/A 0.035±0.00 0.483±0.00 0.061±0.00 N/A N/A N/A N/A N/A
ENSDART00000131460 N/A N/A N/A 13.099±1.26 N/A N/A 0.216±0.13 0.842±0.46 0.019±0.00 N/A N/A N/A N/A N/A
ENSDART00000141372 N/A N/A N/A N/A N/A N/A 0.220±0.00 1.561±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000149527 ENST00000278878 0.009±0.00 N/A N/A 2.500±0.00 0.319±0.27 N/A N/A N/A N/A N/A N/A 0.158±0.10 0.093±0.00 N/A
ENST00000343889 N/A N/A N/A N/A N/A 0.071±0.03 0.020±0.00 N/A N/A N/A N/A 0.081±0.00 0.047±0.00 0.127±0.00
ENST00000378486 0.007±0.00 N/A 0.137±0.00 1.073±0.37 N/A N/A N/A N/A N/A N/A N/A 0.197±0.00 0.359±0.00 N/A
ENST00000419816 0.006±0.00 N/A 0.131±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449969 N/A 0.416±0.00 N/A 0.935±0.37 0.077±0.00 N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A
ENST00000462379 0.038±0.00 0.531±0.00 N/A N/A N/A 0.322±0.00 0.113±0.00 0.967±0.00 N/A N/A N/A 1.269±0.00 0.107±0.04 0.460±0.00
ENST00000473964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.782±0.00 N/A N/A
ENSG00000157911 ENST00000288774 N/A N/A N/A 1.201±0.00 6.962±0.00 N/A N/A N/A N/A 1.865±0.00 N/A 1.552±0.00 N/A N/A
ENST00000447513 N/A N/A 1.815±0.00 N/A 11.479±0.00 N/A 1.559±0.00 3.097±0.00 1.284±0.00 N/A N/A 13.516±0.00 5.909±0.00 19.751±0.00
ENST00000502666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000157916 ENST00000306256 27.257±0.00 N/A N/A N/A N/A N/A 16.272±0.00 N/A 53.478±0.00 19.115±0.00 32.768±0.00 N/A N/A 33.109±0.00
ENST00000378512 24.114±0.00 30.371±0.00 3.648±0.00 3.830±0.00 13.207±5.04 9.450±3.93 10.161±7.63 19.845±12.63 26.849±23.12 9.452±6.48 17.032±10.24 26.081±7.52 18.465±0.00 25.238±8.44
ENST00000378513 N/A N/A N/A 3.411±0.00 N/A 1.505±0.00 0.847±0.00 3.963±0.00 1.798±0.00 0.690±0.00 0.678±0.00 N/A N/A N/A
ENST00000378518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.959±0.00 40.958±0.00
ENST00000443438 N/A N/A N/A N/A N/A N/A N/A 12.163±0.00 N/A N/A N/A N/A N/A N/A
ENST00000462129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605895 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.638±0.00 N/A 6.596±0.00 N/A N/A
ENSG00000224387 ENST00000424657 N/A 0.127±0.00 N/A 0.079±0.00 N/A N/A N/A 0.336±0.00 N/A N/A N/A 0.186±0.00 N/A 0.184±0.00
ENSG00000229393 ENST00000442305 N/A 0.312±0.00 N/A 0.214±0.00 N/A N/A N/A N/A N/A N/A N/A 0.104±0.00 N/A 0.907±0.00

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