C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005Z5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198173-ENSG00000130962 CGP 9606 X:37008397-37457295
GeneTranscriptPositionBiotype
ENSG00000130962 (PRRG1)
proline rich Gla (G-carboxyglutamic acid) 1 		ENST00000378628 (PRRG1-006) 37349275-37457295 protein_coding
ENST00000449135 (PRRG1-001) 37349372-37457289 protein_coding
ENST00000463135 (PRRG1-002) 37349379-37442224 protein_coding
ENST00000466533 (PRRG1-004) 37349330-37453411 protein_coding
ENST00000470290 (PRRG1-007) 37425752-37453646 retained_intron
ENST00000484460 (PRRG1-008) 37349364-37453308 protein_coding
ENST00000491253 (PRRG1-005) 37349309-37453647 processed_transcript
ENST00000542554 (PRRG1-201) 37349330-37457292 protein_coding
ENST00000543642 (PRRG1-202) 37349330-37457292 protein_coding
ENSG00000198173 (FAM47C)
family with sequence similarity 47, member C 		ENST00000358047 (FAM47C-001) 37008397-37011666 protein_coding
ENSG00000214071 (RP11-31H15.2)
 ENST00000435382 (RP11-31H15.2-001) 37077851-37078401 unprocessed_pseudogene
ENSG00000243048 (FTH1P18)
ferritin, heavy polypeptide 1 pseudogene 18 		ENST00000412071 (FTH1P18-001) 37043023-37043571 unprocessed_pseudogene
ENSG00000250349 (TM4SF2)
Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000417050}; cDNA FLJ59144, highly similar to Tetraspanin-7 {ECO:0000313|EMBL: 		ENST00000465127 (TM4SF2-001) 37349330-38687674 protein_coding
CIL_0005Z5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035651-ENSMUSG00000047996 CGP 10090 X:78369643-78583896
GeneTranscriptPositionBiotype
ENSMUSG00000035651 (4930480E11Rik)
RIKEN cDNA 4930480E11 gene 		ENSMUST00000035626 (4930480E11Rik-001) 78369643-78371128 protein_coding
ENSMUSG00000047996 (Prrg1)
proline rich Gla (G-carboxyglutamic acid) 1 		ENSMUST00000114024 (Prrg1-201) 78449613-78583896 protein_coding
ENSMUST00000114025 (Prrg1-001) 78449613-78583891 protein_coding
ENSMUST00000126209 (Prrg1-005) 78469944-78583855 processed_transcript
ENSMUST00000126994 (Prrg1-003) 78480713-78583782 retained_intron
ENSMUST00000132852 (Prrg1-006) 78520338-78583890 retained_intron
ENSMUST00000134602 (Prrg1-007) 78483806-78583894 protein_coding
ENSMUST00000137011 (Prrg1-008) 78520804-78583852 processed_transcript
ENSMUST00000148345 (Prrg1-002) 78517305-78583891 retained_intron
ENSMUST00000156427 (Prrg1-004) 78480730-78583896 retained_intron
ENSMUST00000177904 (Prrg1-202) 78449613-78583782 protein_coding
ENSMUSG00000081881 (Gm14752)
predicted gene 14752 		ENSMUST00000120719 (Gm14752-001) 78405676-78409435 processed_pseudogene
ENSMUSG00000082865 (Gm14745)
predicted gene 14745 		ENSMUST00000118480 (Gm14745-001) 78416198-78417293 processed_pseudogene
ENSMUSG00000083927 (Gm14749)
predicted gene 14749 		ENSMUST00000121269 (Gm14749-001) 78375313-78375758 processed_pseudogene
ENSMUSG00000088335 (Gm22843)
predicted gene, 22843 		ENSMUST00000157710 (Gm22843-201) 78550746-78550879 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Z5_0001ENSG00000130962ENST00000378628ENST00000449135ENST00000463135ENST00000466533ENST00000470290ENST00000484460ENST00000491253ENST00000542554ENST00000543642ENSG00000198173ENST00000358047ENSG00000214071ENST00000435382ENSG00000243048ENST00000412071ENSG00000250349ENST00000465127CIL_0005Z5_0002ENSMUSG00000035651ENSMUST00000035626ENSMUSG00000047996ENSMUST00000114024ENSMUST00000114025ENSMUST00000126209ENSMUST00000126994ENSMUST00000132852ENSMUST00000134602ENSMUST00000137011ENSMUST00000148345ENSMUST00000156427ENSMUST00000177904ENSMUSG00000081881ENSMUST00000120719ENSMUSG00000082865ENSMUST00000118480ENSMUSG00000083927ENSMUST00000121269ENSMUSG00000088335ENSMUST00000157710
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Z5_0001ENSG00000130962ENST00000378628ENST00000449135ENST00000470290ENST00000491253ENST00000542554ENST00000543642ENSG00000198173ENST00000358047ENSG00000214071ENST00000435382ENSG00000243048ENST00000412071ENSG00000250349ENST00000465127CIL_0005Z5_0002ENSMUSG00000035651ENSMUST00000035626ENSMUSG00000047996ENSMUST00000114024ENSMUST00000114025ENSMUST00000126209ENSMUST00000132852ENSMUST00000134602ENSMUST00000148345ENSMUST00000156427ENSMUST00000177904ENSMUSG00000081881ENSMUST00000120719ENSMUSG00000082865ENSMUST00000118480ENSMUSG00000083927ENSMUST00000121269ENSMUSG00000088335ENSMUST00000157710
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130962 ENST00000378628 6.835±0.00 2.771±0.00 1.793±0.00 11.669±0.00 1.486±0.00 1.483±0.00 1.503±1.03 1.726±0.00 0.445±0.00 3.838±1.06 2.914±0.90 1.103±0.40 1.747±0.87 N/A
ENST00000449135 N/A N/A 1.501±0.00 9.026±0.00 N/A N/A N/A N/A 0.717±0.25 N/A N/A 0.159±0.00 N/A N/A
ENST00000463135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470290 N/A N/A N/A N/A N/A N/A 2.289±0.00 N/A N/A N/A N/A 1.768±0.00 N/A N/A
ENST00000484460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491253 N/A N/A N/A N/A 5.682±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542554 N/A N/A N/A N/A N/A N/A N/A 0.722±0.00 N/A N/A N/A N/A N/A N/A
ENST00000543642 N/A N/A N/A N/A N/A 2.648±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198173 ENST00000358047 N/A 0.062±0.00 N/A 0.008±0.00 0.015±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.141±0.78
ENSG00000214071 ENST00000435382 N/A N/A N/A N/A 0.423±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.250±0.64
ENSG00000243048 ENST00000412071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.304±2.99
ENSG00000250349 ENST00000465127 N/A N/A N/A N/A N/A N/A N/A 3.803±0.00 N/A N/A N/A N/A 4.290±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035651 ENSMUST00000035626 N/A N/A N/A N/A N/A N/A 0.022±0.00 0.032±0.00 N/A N/A N/A N/A N/A 1.127±0.49
ENSMUSG00000047996 ENSMUST00000114024 3.459±1.83 0.415±0.17 0.697±0.10 0.500±0.23 1.463±0.00 N/A 1.230±0.90 0.874±0.27 0.697±0.34 1.714±0.91 0.737±0.06 0.944±0.62 0.460±0.29 0.330±0.14
ENSMUST00000114025 N/A 0.817±0.00 0.243±0.00 N/A 1.621±0.63 N/A 0.635±0.01 0.490±0.14 0.271±0.00 N/A 0.817±0.00 0.820±0.00 0.170±0.04 N/A
ENSMUST00000126209 N/A 0.121±0.03 N/A N/A 0.707±0.00 0.311±0.09 N/A N/A 0.046±0.00 N/A N/A 0.518±0.00 N/A N/A
ENSMUST00000126994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132852 N/A N/A N/A N/A N/A N/A N/A N/A 0.345±0.01 N/A N/A N/A N/A N/A
ENSMUST00000134602 N/A 0.242±0.00 N/A N/A N/A N/A N/A 1.641±0.00 0.203±0.00 2.982±0.84 N/A 1.952±0.70 N/A 1.599±0.00
ENSMUST00000137011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148345 N/A 0.124±0.03 N/A N/A N/A 2.220±0.00 N/A 0.139±0.00 4.834±0.00 0.418±0.00 N/A 0.356±0.07 N/A 0.130±0.00
ENSMUST00000156427 N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A 0.111±0.00
ENSMUST00000177904 0.860±0.00 0.724±0.10 0.443±0.13 0.478±0.36 1.985±0.85 0.555±0.10 1.896±0.19 1.019±0.16 0.257±0.13 1.891±0.96 0.623±0.19 1.890±0.82 0.228±0.10 N/A
ENSMUSG00000081881 ENSMUST00000120719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.00
ENSMUSG00000082865 ENSMUST00000118480 0.036±0.00 N/A N/A 0.045±0.00 0.157±0.00 N/A N/A 0.073±0.00 0.068±0.00 N/A N/A 0.153±0.11 N/A 0.091±0.00
ENSMUSG00000083927 ENSMUST00000121269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.280±0.00 0.219±0.00 N/A
ENSMUSG00000088335 ENSMUST00000157710 N/A N/A N/A N/A N/A N/A N/A N/A 4.994±0.00 N/A N/A N/A N/A N/A

Loading