C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005ZB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178997-ENSG00000187446 CGP 9606 15:41182725-41281890
GeneTranscriptPositionBiotype
ENSG00000187446 (CHP1)
calcineurin-like EF-hand protein 1 		ENST00000334660 (CHP1-001) 41231143-41281890 protein_coding
ENST00000392151 (CHP1-002) 41231239-41279719 nonsense_mediated_decay
ENST00000558351 (CHP1-009) 41230839-41279435 processed_transcript
ENST00000560397 (CHP1-006) 41231293-41279402 protein_coding
ENST00000560411 (CHP1-003) 41231140-41279719 nonsense_mediated_decay
ENST00000560633 (CHP1-005) 41256684-41272375 processed_transcript
ENST00000560784 (CHP1-008) 41231222-41278840 nonsense_mediated_decay
ENST00000560965 (CHP1-004) 41256910-41272375 protein_coding
ENST00000561280 (CHP1-007) 41231239-41262866 processed_transcript
ENSG00000240847 (RN7SL497P)
RNA, 7SL, cytoplasmic 497, pseudogene 		ENST00000476341 (RN7SL497P-201) 41191965-41192265 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0005ZB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048647-ENSMUSG00000014077 CGP 10090 2:119516505-119587027
GeneTranscriptPositionBiotype
ENSMUSG00000014077 (Chp1)
calcineurin-like EF hand protein 1 		ENSMUST00000014221 (Chp1-001) 119547697-119587027 protein_coding
ENSMUST00000119172 (Chp1-002) 119547721-119587015 protein_coding
ENSMUST00000132448 (Chp1-003) 119559512-119571895 protein_coding
ENSMUST00000137585 (Chp1-004) 119566605-119585405 retained_intron
ENSMUST00000154406 (Chp1-005) 119547812-119572050 retained_intron
ENSMUSG00000048647 (Exd1)
exonuclease 3'-5' domain containing 1 		ENSMUST00000060009 (Exd1-001) 119516505-119547627 protein_coding
ENSMUST00000133668 (Exd1-002) 119538837-119547194 protein_coding
ENSMUST00000171024 (Exd1-201) 119516511-119541513 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ZB_0001ENSG00000187446ENST00000334660ENST00000392151ENST00000558351ENST00000560397ENST00000560411ENST00000560633ENST00000560784ENST00000560965ENST00000561280ENSG00000240847ENST00000476341CIL_0005ZB_0002ENSMUSG00000014077ENSMUST00000014221ENSMUST00000119172ENSMUST00000132448ENSMUST00000137585ENSMUST00000154406ENSMUSG00000048647ENSMUST00000060009ENSMUST00000133668ENSMUST00000171024
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ZB_0001ENSG00000187446ENST00000334660ENST00000560411ENSG00000240847ENST00000476341CIL_0005ZB_0002ENSMUSG00000014077ENSMUST00000014221ENSMUST00000119172ENSMUST00000137585ENSMUSG00000048647ENSMUST00000060009ENSMUST00000133668ENSMUST00000171024
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000187446 ENST00000334660 50.574±0.00 13.536±0.00 2.244±0.00 11.653±3.83 27.660±21.48 24.826±1.91 15.650±8.34 41.454±3.24 39.384±27.92 22.014±11.46 29.978±21.88 18.224±6.85 14.158±4.30 12.710±4.03
ENST00000392151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560411 N/A N/A 6.889±0.00 N/A N/A N/A N/A N/A 5.016±0.00 N/A 4.842±0.00 5.425±0.00 N/A N/A
ENST00000560633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240847 ENST00000476341 N/A 0.125±0.00 N/A 0.069±0.00 0.132±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.158±0.87
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014077 ENSMUST00000014221 194.046±81.14 121.087±7.74 60.205±4.24 22.209±2.75 160.637±38.35 131.095±20.33 36.794±2.98 73.731±7.87 94.853±48.47 67.599±1.85 27.004±1.01 51.200±21.12 39.789±12.20 12.470±5.36
ENSMUST00000119172 N/A N/A N/A 2.739±0.15 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137585 N/A N/A N/A 79.341±0.00 N/A N/A N/A N/A N/A N/A N/A 109.032±0.00 226.692±54.24 16.383±0.00
ENSMUST00000154406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000048647 ENSMUST00000060009 0.331±0.03 0.148±0.02 0.306±0.00 0.098±0.02 0.145±0.03 0.109±0.07 N/A 0.092±0.04 0.111±0.05 0.144±0.04 0.171±0.10 0.187±0.08 0.133±0.05 1.761±0.82
ENSMUST00000133668 N/A N/A N/A 2.234±0.00 N/A N/A N/A 0.376±0.00 N/A N/A N/A 1.231±0.71 3.253±0.64 54.649±0.00
ENSMUST00000171024 0.664±0.31 0.244±0.14 0.591±0.00 0.085±0.03 0.815±0.19 0.287±0.15 0.109±0.03 0.178±0.01 0.273±0.24 0.207±0.07 0.212±0.11 0.285±0.16 0.203±0.06 0.621±0.18

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