C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000604_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032802-ENSDARG00000029045 CGP 7955 17:43973080-44127290
GeneTranscriptPositionBiotype
ENSDARG00000029045 (peli2)
pellino homolog 2 (Drosophila) 		ENSDART00000049503 (peli2-001) 44077249-44127290 protein_coding
ENSDARG00000032802 (ktn1)
kinectin 1 		ENSDART00000017376 (ktn1-201) 43973100-44048587 protein_coding
ENSDART00000041447 (ktn1-002) 43973117-44048574 protein_coding
ENSDART00000086149 (ktn1-202) 43973117-44048574 protein_coding
ENSDART00000121550 (ktn1-001) 43973080-44048589 protein_coding
ENSDARG00000081051 (BX511267.1)
 ENSDART00000115620 (BX511267.1-201) 44084271-44084358 miRNA
ENSDARG00000089360 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000129792 (5S_rRNA.1756-201) 43976555-43976669 rRNA
ENSDARG00000097825 (im:7154473)
im:7154473 		ENSDART00000153887 (im:7154473-002) 44053196-44057382 lincRNA
ENSDART00000156513 (im:7154473-001) 44052445-44057410 lincRNA
ENSDART00000156960 (im:7154473-003) 44053297-44056781 lincRNA

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_000604_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000126777-ENSG00000139946 CGP 9606 14:55559072-56301526
GeneTranscriptPositionBiotype
ENSG00000139946 (PELI2)
pellino E3 ubiquitin protein ligase family member 2 		ENST00000267460 (PELI2-001) 56118375-56301526 protein_coding
ENST00000559044 (PELI2-002) 56117814-56290344 protein_coding
ENST00000561019 (PELI2-003) 56119109-56290293 protein_coding
ENSG00000177350 (RPL13AP3)
ribosomal protein L13a pseudogene 3 		ENST00000487479 (RPL13AP3-001) 55766177-55766790 transcribed_processed_pseudogene
ENST00000494676 (RPL13AP3-002) 55766245-55767717 processed_transcript
ENSG00000200742 (Y_RNA)
Y RNA 		ENST00000363872 (Y_RNA.1-381) 55651534-55651634 misc_RNA
ENSG00000258784 (RP11-813I20.2)
 ENST00000554458 (RP11-813I20.2-001) 55748208-55773203 lincRNA
ENSG00000258791 (LINC00520)
long intergenic non-protein coding RNA 520 		ENST00000554186 (LINC00520-001) 55792725-55796639 lincRNA
ENST00000554196 (LINC00520-004) 55787927-55793360 lincRNA
ENST00000554221 (LINC00520-003) 55782409-55796688 lincRNA
ENST00000556417 (LINC00520-002) 55782426-55796674 lincRNA
ENST00000560267 (LINC00520-005) 55781135-55796656 lincRNA
ENST00000560336 (LINC00520-006) 55782067-55796688 lincRNA
ENSG00000259868 (RP11-1012E15.2)
 ENST00000569625 (RP11-1012E15.2-002) 55915727-55916326 sense_intronic
ENST00000612704 (RP11-1012E15.2-001) 55896547-55962970 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_000604_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021843-ENSMUSG00000021846 CGP 10090 14:47648448-48260883
GeneTranscriptPositionBiotype
ENSMUSG00000021843 (Ktn1)
kinectin 1 		ENSMUST00000022391 (Ktn1-201) 47663756-47736563 protein_coding
ENSMUST00000185343 (Ktn1-010) 47663787-47736291 protein_coding
ENSMUST00000185940 (Ktn1-012) 47663787-47736291 protein_coding
ENSMUST00000186466 (Ktn1-022) 47649316-47664315 protein_coding
ENSMUST00000186627 (Ktn1-006) 47663787-47736288 protein_coding
ENSMUST00000186700 (Ktn1-021) 47705655-47715476 retained_intron
ENSMUST00000186761 (Ktn1-018) 47663787-47736293 protein_coding
ENSMUST00000187039 (Ktn1-015) 47663787-47736291 protein_coding
ENSMUST00000187262 (Ktn1-013) 47663787-47736289 protein_coding
ENSMUST00000187839 (Ktn1-003) 47648448-47736557 protein_coding
ENSMUST00000188049 (Ktn1-024) 47714677-47724884 retained_intron
ENSMUST00000188263 (Ktn1-025) 47724768-47726243 retained_intron
ENSMUST00000188330 (Ktn1-009) 47663787-47736279 protein_coding
ENSMUST00000188553 (Ktn1-011) 47663787-47736291 protein_coding
ENSMUST00000189101 (Ktn1-017) 47663787-47736293 protein_coding
ENSMUST00000189533 (Ktn1-014) 47663787-47736291 protein_coding
ENSMUST00000189986 (Ktn1-001) 47649394-47736564 nonsense_mediated_decay
ENSMUST00000190164 (Ktn1-023) 47700641-47704437 retained_intron
ENSMUST00000190182 (Ktn1-004) 47663787-47736291 protein_coding
ENSMUST00000190252 (Ktn1-002) 47649311-47736557 protein_coding
ENSMUST00000190535 (Ktn1-005) 47663787-47736291 protein_coding
ENSMUST00000190857 (Ktn1-020) 47729659-47736561 retained_intron
ENSMUST00000190999 (Ktn1-008) 47663787-47736291 protein_coding
ENSMUST00000191018 (Ktn1-007) 47663787-47736284 protein_coding
ENSMUST00000191446 (Ktn1-019) 47663787-47736287 protein_coding
ENSMUST00000191511 (Ktn1-016) 47663787-47736291 protein_coding
ENSMUSG00000021846 (Peli2)
pellino 2 		ENSMUST00000073150 (Peli2-201) 48120869-48260883 protein_coding
ENSMUSG00000062081 (Gm6055)
predicted gene 6055 		ENSMUST00000180532 (Gm6055-001) 48079375-48079752 processed_pseudogene
ENSMUSG00000063885 (Gm6498)
predicted gene 6498 		ENSMUST00000081029 (Gm6498-001) 48198716-48228413 processed_transcript
ENSMUST00000181413 (Gm6498-002) 48227201-48228206 transcribed_processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000604_0001ENSDARG00000029045ENSDART00000049503ENSDARG00000032802ENSDART00000017376ENSDART00000041447ENSDART00000086149ENSDART00000121550ENSDARG00000081051ENSDART00000115620ENSDARG00000089360ENSDART00000129792ENSDARG00000097825ENSDART00000153887ENSDART00000156513ENSDART00000156960CIL_000604_0002ENSG00000139946ENST00000267460ENST00000559044ENST00000561019ENSG00000177350ENST00000487479ENST00000494676ENSG00000200742ENST00000363872ENSG00000258784ENST00000554458ENSG00000258791ENST00000554186ENST00000554196ENST00000554221ENST00000556417ENST00000560267ENST00000560336ENSG00000259868ENST00000569625ENST00000612704CIL_000604_0003ENSMUSG00000021843ENSMUST00000022391ENSMUST00000185343ENSMUST00000185940ENSMUST00000186466ENSMUST00000186627ENSMUST00000186700ENSMUST00000186761ENSMUST00000187039ENSMUST00000187262ENSMUST00000187839ENSMUST00000188049ENSMUST00000188263ENSMUST00000188330ENSMUST00000188553ENSMUST00000189101ENSMUST00000189533ENSMUST00000189986ENSMUST00000190164ENSMUST00000190182ENSMUST00000190252ENSMUST00000190535ENSMUST00000190857ENSMUST00000190999ENSMUST00000191018ENSMUST00000191446ENSMUST00000191511ENSMUSG00000021846ENSMUST00000073150ENSMUSG00000062081ENSMUST00000180532ENSMUSG00000063885ENSMUST00000081029ENSMUST00000181413
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000604_0001ENSDARG00000029045ENSDART00000049503ENSDARG00000032802ENSDART00000017376ENSDART00000041447ENSDART00000121550ENSDARG00000081051ENSDART00000115620ENSDARG00000089360ENSDART00000129792ENSDARG00000097825ENSDART00000153887ENSDART00000156513ENSDART00000156960CIL_000604_0002ENSG00000139946ENST00000267460ENST00000561019ENSG00000177350ENST00000487479ENST00000494676ENSG00000200742ENST00000363872ENSG00000258784ENST00000554458ENSG00000258791ENST00000554186ENST00000554196ENST00000554221ENST00000556417ENST00000560267ENST00000560336ENSG00000259868ENST00000569625ENST00000612704CIL_000604_0003ENSMUSG00000021843ENSMUST00000022391ENSMUST00000185343ENSMUST00000186627ENSMUST00000186761ENSMUST00000187262ENSMUST00000188330ENSMUST00000188553ENSMUST00000189986ENSMUST00000190182ENSMUST00000190252ENSMUST00000190857ENSMUSG00000021846ENSMUST00000073150ENSMUSG00000062081ENSMUST00000180532ENSMUSG00000063885ENSMUST00000081029ENSMUST00000181413
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000029045 ENSDART00000049503 N/A N/A N/A 1.613±0.60 N/A N/A 6.296±2.83 8.521±5.64 0.635±0.00 N/A N/A N/A N/A N/A
ENSDARG00000032802 ENSDART00000017376 N/A N/A N/A N/A N/A N/A 16.612±1.04 1.297±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000041447 N/A N/A N/A 10.948±3.08 N/A N/A 1.047±0.00 4.788±0.54 0.745±0.00 N/A 6.263±0.00 N/A N/A N/A
ENSDART00000086149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000121550 N/A N/A N/A 10.009±0.00 N/A N/A 1.283±0.00 1.018±0.00 1.594±0.00 N/A 4.425±0.00 N/A N/A N/A
ENSDARG00000081051 ENSDART00000115620 N/A N/A N/A 296.194±0.00 N/A N/A 6.396±0.00 848.223±0.00 2.833±0.00 N/A N/A N/A N/A N/A
ENSDARG00000089360 ENSDART00000129792 N/A N/A N/A 91.128±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000097825 ENSDART00000153887 N/A N/A N/A 2.368±0.00 N/A N/A 0.529±0.00 0.849±0.00 0.837±0.00 N/A 1.180±0.00 N/A N/A N/A
ENSDART00000156513 N/A N/A N/A 2.018±0.00 N/A N/A 0.497±0.00 2.918±0.00 N/A N/A 1.159±0.00 N/A N/A N/A
ENSDART00000156960 N/A N/A N/A N/A N/A N/A N/A N/A 0.432±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139946 ENST00000267460 N/A 1.816±0.00 1.782±0.00 0.866±0.53 1.904±0.33 1.626±0.78 0.415±0.10 0.453±0.05 0.668±0.43 2.248±0.36 0.869±0.31 1.554±0.84 N/A 4.391±0.42
ENST00000559044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561019 N/A N/A N/A 2.603±0.00 6.172±0.00 5.047±0.00 1.225±0.00 1.113±0.00 N/A N/A 5.363±0.00 N/A N/A N/A
ENSG00000177350 ENST00000487479 0.303±0.00 0.881±0.00 N/A 0.089±0.00 0.271±0.00 0.143±0.00 0.038±0.00 0.216±0.00 0.077±0.00 0.458±0.00 0.652±0.00 N/A 0.112±0.00 N/A
ENST00000494676 0.035±0.00 0.060±0.00 0.209±0.00 N/A 0.036±0.00 0.076±0.00 N/A N/A N/A 0.024±0.00 0.106±0.00 0.072±0.03 N/A 0.881±0.44
ENSG00000200742 ENST00000363872 0.196±0.00 1.193±0.00 N/A 0.592±0.00 N/A N/A 0.350±0.00 N/A N/A N/A N/A 0.719±0.00 N/A N/A
ENSG00000258784 ENST00000554458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00
ENSG00000258791 ENST00000554186 N/A N/A N/A N/A N/A 0.280±0.00 N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A
ENST00000554196 0.099±0.00 0.130±0.00 N/A 0.342±0.00 0.025±0.00 0.047±0.00 0.268±0.00 0.363±0.00 N/A 0.100±0.00 0.190±0.00 0.209±0.02 N/A 0.139±0.00
ENST00000554221 N/A 0.245±0.00 N/A 0.082±0.00 N/A 0.037±0.00 N/A N/A N/A N/A N/A 0.413±0.30 0.030±0.00 0.036±0.00
ENST00000556417 N/A N/A N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A
ENST00000560267 N/A N/A N/A N/A 0.234±0.00 N/A N/A N/A N/A 0.198±0.00 N/A 0.798±0.00 0.172±0.00 N/A
ENST00000560336 N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A N/A 0.323±0.00 N/A N/A
ENSG00000259868 ENST00000569625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.00
ENST00000612704 N/A N/A N/A 0.044±0.00 0.085±0.00 0.079±0.00 0.080±0.00 N/A N/A N/A 0.089±0.00 0.648±0.67 0.042±0.00 0.175±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021843 ENSMUST00000022391 N/A N/A 6.388±0.66 N/A N/A N/A N/A N/A 0.968±0.14 N/A 9.728±0.63 11.049±0.43 6.156±3.13 N/A
ENSMUST00000185343 N/A N/A N/A 5.072±0.37 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186627 N/A N/A 5.129±0.41 N/A N/A N/A N/A N/A 1.862±0.31 N/A N/A 4.897±1.04 6.836±2.96 N/A
ENSMUST00000186700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.920±0.00 15.239±0.00 20.674±0.00 6.125±0.00
ENSMUST00000187039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187262 N/A N/A N/A 16.069±0.00 N/A N/A N/A N/A 1.569±0.00 N/A 6.337±0.00 35.371±0.00 19.028±12.24 2.864±0.00
ENSMUST00000187839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188330 N/A N/A N/A 24.820±0.00 N/A N/A N/A N/A N/A N/A N/A 3.836±0.00 N/A N/A
ENSMUST00000188553 N/A N/A N/A 22.982±0.00 N/A N/A N/A N/A N/A N/A 7.581±0.83 N/A N/A 4.159±0.00
ENSMUST00000189101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189986 N/A N/A N/A N/A N/A N/A N/A N/A 1.028±0.14 N/A N/A 4.409±0.54 N/A N/A
ENSMUST00000190164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.801±0.00 15.734±9.64 N/A
ENSMUST00000190252 1.755±1.29 5.202±1.17 5.095±0.58 7.148±0.34 2.033±0.35 1.075±0.00 6.392±0.66 0.818±0.53 1.380±0.57 2.598±0.37 11.972±1.40 2.869±1.40 4.760±1.70 N/A
ENSMUST00000190535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190857 1.472±0.39 1.459±0.22 4.434±0.85 6.293±0.82 2.810±1.36 1.322±0.62 3.268±0.35 0.676±0.13 0.985±0.54 1.435±0.26 N/A 2.647±1.13 N/A 0.142±0.05
ENSMUST00000190999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000021846 ENSMUST00000073150 9.588±0.56 5.463±2.21 10.844±1.61 3.229±1.27 5.367±0.54 6.496±0.99 2.360±0.29 11.176±1.04 2.851±1.97 7.861±1.22 1.783±0.17 13.988±5.14 0.984±0.70 17.755±8.23
ENSMUSG00000062081 ENSMUST00000180532 5.817±2.03 2.425±0.92 3.071±1.66 2.045±1.60 2.160±0.74 1.259±0.97 1.867±0.38 2.816±1.10 1.664±0.84 1.924±0.50 1.058±0.41 2.960±1.91 0.785±0.24 1.015±0.17
ENSMUSG00000063885 ENSMUST00000081029 0.167±0.14 N/A 0.134±0.02 0.062±0.03 0.147±0.06 0.235±0.09 0.081±0.05 0.213±0.16 0.037±0.02 0.133±0.05 0.094±0.00 0.166±0.07 0.033±0.01 0.142±0.09
ENSMUST00000181413 0.178±0.03 0.090±0.02 0.035±0.00 0.085±0.05 0.357±0.29 0.224±0.16 0.114±0.01 0.170±0.11 0.056±0.04 0.216±0.09 0.029±0.00 0.260±0.22 0.036±0.02 0.139±0.00

Loading