C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000604_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032802-ENSDARG00000029045 CGP 7955 17:43973080-44127290
GeneTranscriptPositionBiotype
ENSDARG00000029045 (peli2)
pellino homolog 2 (Drosophila) 		ENSDART00000049503 (peli2-001) 44077249-44127290 protein_coding
ENSDARG00000032802 (ktn1)
kinectin 1 		ENSDART00000017376 (ktn1-201) 43973100-44048587 protein_coding
ENSDART00000041447 (ktn1-002) 43973117-44048574 protein_coding
ENSDART00000086149 (ktn1-202) 43973117-44048574 protein_coding
ENSDART00000121550 (ktn1-001) 43973080-44048589 protein_coding
ENSDARG00000081051 (BX511267.1)
 ENSDART00000115620 (BX511267.1-201) 44084271-44084358 miRNA
ENSDARG00000089360 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000129792 (5S_rRNA.1756-201) 43976555-43976669 rRNA
ENSDARG00000097825 (im:7154473)
im:7154473 		ENSDART00000153887 (im:7154473-002) 44053196-44057382 lincRNA
ENSDART00000156513 (im:7154473-001) 44052445-44057410 lincRNA
ENSDART00000156960 (im:7154473-003) 44053297-44056781 lincRNA
CIL_000604_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000126777-ENSG00000139946 CGP 9606 14:55559072-56301526
GeneTranscriptPositionBiotype
ENSG00000139946 (PELI2)
pellino E3 ubiquitin protein ligase family member 2 		ENST00000267460 (PELI2-001) 56118375-56301526 protein_coding
ENST00000559044 (PELI2-002) 56117814-56290344 protein_coding
ENST00000561019 (PELI2-003) 56119109-56290293 protein_coding
ENSG00000177350 (RPL13AP3)
ribosomal protein L13a pseudogene 3 		ENST00000487479 (RPL13AP3-001) 55766177-55766790 transcribed_processed_pseudogene
ENST00000494676 (RPL13AP3-002) 55766245-55767717 processed_transcript
ENSG00000200742 (Y_RNA)
Y RNA 		ENST00000363872 (Y_RNA.1-381) 55651534-55651634 misc_RNA
ENSG00000258784 (RP11-813I20.2)
 ENST00000554458 (RP11-813I20.2-001) 55748208-55773203 lincRNA
ENSG00000258791 (LINC00520)
long intergenic non-protein coding RNA 520 		ENST00000554186 (LINC00520-001) 55792725-55796639 lincRNA
ENST00000554196 (LINC00520-004) 55787927-55793360 lincRNA
ENST00000554221 (LINC00520-003) 55782409-55796688 lincRNA
ENST00000556417 (LINC00520-002) 55782426-55796674 lincRNA
ENST00000560267 (LINC00520-005) 55781135-55796656 lincRNA
ENST00000560336 (LINC00520-006) 55782067-55796688 lincRNA
ENSG00000259868 (RP11-1012E15.2)
 ENST00000569625 (RP11-1012E15.2-002) 55915727-55916326 sense_intronic
ENST00000612704 (RP11-1012E15.2-001) 55896547-55962970 lincRNA
CIL_000604_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021843-ENSMUSG00000021846 CGP 10090 14:47648448-48260883
GeneTranscriptPositionBiotype
ENSMUSG00000021843 (Ktn1)
kinectin 1 		ENSMUST00000022391 (Ktn1-201) 47663756-47736563 protein_coding
ENSMUST00000185343 (Ktn1-010) 47663787-47736291 protein_coding
ENSMUST00000185940 (Ktn1-012) 47663787-47736291 protein_coding
ENSMUST00000186466 (Ktn1-022) 47649316-47664315 protein_coding
ENSMUST00000186627 (Ktn1-006) 47663787-47736288 protein_coding
ENSMUST00000186700 (Ktn1-021) 47705655-47715476 retained_intron
ENSMUST00000186761 (Ktn1-018) 47663787-47736293 protein_coding
ENSMUST00000187039 (Ktn1-015) 47663787-47736291 protein_coding
ENSMUST00000187262 (Ktn1-013) 47663787-47736289 protein_coding
ENSMUST00000187839 (Ktn1-003) 47648448-47736557 protein_coding
ENSMUST00000188049 (Ktn1-024) 47714677-47724884 retained_intron
ENSMUST00000188263 (Ktn1-025) 47724768-47726243 retained_intron
ENSMUST00000188330 (Ktn1-009) 47663787-47736279 protein_coding
ENSMUST00000188553 (Ktn1-011) 47663787-47736291 protein_coding
ENSMUST00000189101 (Ktn1-017) 47663787-47736293 protein_coding
ENSMUST00000189533 (Ktn1-014) 47663787-47736291 protein_coding
ENSMUST00000189986 (Ktn1-001) 47649394-47736564 nonsense_mediated_decay
ENSMUST00000190164 (Ktn1-023) 47700641-47704437 retained_intron
ENSMUST00000190182 (Ktn1-004) 47663787-47736291 protein_coding
ENSMUST00000190252 (Ktn1-002) 47649311-47736557 protein_coding
ENSMUST00000190535 (Ktn1-005) 47663787-47736291 protein_coding
ENSMUST00000190857 (Ktn1-020) 47729659-47736561 retained_intron
ENSMUST00000190999 (Ktn1-008) 47663787-47736291 protein_coding
ENSMUST00000191018 (Ktn1-007) 47663787-47736284 protein_coding
ENSMUST00000191446 (Ktn1-019) 47663787-47736287 protein_coding
ENSMUST00000191511 (Ktn1-016) 47663787-47736291 protein_coding
ENSMUSG00000021846 (Peli2)
pellino 2 		ENSMUST00000073150 (Peli2-201) 48120869-48260883 protein_coding
ENSMUSG00000062081 (Gm6055)
predicted gene 6055 		ENSMUST00000180532 (Gm6055-001) 48079375-48079752 processed_pseudogene
ENSMUSG00000063885 (Gm6498)
predicted gene 6498 		ENSMUST00000081029 (Gm6498-001) 48198716-48228413 processed_transcript
ENSMUST00000181413 (Gm6498-002) 48227201-48228206 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000604_0001ENSDARG00000029045ENSDART00000049503ENSDARG00000032802ENSDART00000017376ENSDART00000041447ENSDART00000086149ENSDART00000121550ENSDARG00000081051ENSDART00000115620ENSDARG00000089360ENSDART00000129792ENSDARG00000097825ENSDART00000153887ENSDART00000156513ENSDART00000156960CIL_000604_0002ENSG00000139946ENST00000267460ENST00000559044ENST00000561019ENSG00000177350ENST00000487479ENST00000494676ENSG00000200742ENST00000363872ENSG00000258784ENST00000554458ENSG00000258791ENST00000554186ENST00000554196ENST00000554221ENST00000556417ENST00000560267ENST00000560336ENSG00000259868ENST00000569625ENST00000612704CIL_000604_0003ENSMUSG00000021843ENSMUST00000022391ENSMUST00000185343ENSMUST00000185940ENSMUST00000186466ENSMUST00000186627ENSMUST00000186700ENSMUST00000186761ENSMUST00000187039ENSMUST00000187262ENSMUST00000187839ENSMUST00000188049ENSMUST00000188263ENSMUST00000188330ENSMUST00000188553ENSMUST00000189101ENSMUST00000189533ENSMUST00000189986ENSMUST00000190164ENSMUST00000190182ENSMUST00000190252ENSMUST00000190535ENSMUST00000190857ENSMUST00000190999ENSMUST00000191018ENSMUST00000191446ENSMUST00000191511ENSMUSG00000021846ENSMUST00000073150ENSMUSG00000062081ENSMUST00000180532ENSMUSG00000063885ENSMUST00000081029ENSMUST00000181413
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000604_0001ENSDARG00000029045ENSDART00000049503ENSDARG00000032802ENSDART00000017376ENSDART00000041447ENSDART00000121550ENSDARG00000081051ENSDART00000115620ENSDARG00000089360ENSDART00000129792ENSDARG00000097825ENSDART00000153887ENSDART00000156513ENSDART00000156960CIL_000604_0002ENSG00000139946ENST00000267460ENST00000561019ENSG00000177350ENST00000487479ENST00000494676ENSG00000200742ENST00000363872ENSG00000258784ENST00000554458ENSG00000258791ENST00000554186ENST00000554196ENST00000554221ENST00000556417ENST00000560267ENST00000560336ENSG00000259868ENST00000569625ENST00000612704CIL_000604_0003ENSMUSG00000021843ENSMUST00000022391ENSMUST00000185343ENSMUST00000186627ENSMUST00000186761ENSMUST00000187262ENSMUST00000188330ENSMUST00000188553ENSMUST00000189986ENSMUST00000190182ENSMUST00000190252ENSMUST00000190857ENSMUSG00000021846ENSMUST00000073150ENSMUSG00000062081ENSMUST00000180532ENSMUSG00000063885ENSMUST00000081029ENSMUST00000181413
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000029045 ENSDART00000049503 N/A N/A N/A 1.613±0.60 N/A N/A 6.296±2.83 8.521±5.64 0.635±0.00 N/A N/A N/A N/A N/A
ENSDARG00000032802 ENSDART00000017376 N/A N/A N/A N/A N/A N/A 16.612±1.04 1.297±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000041447 N/A N/A N/A 10.948±3.08 N/A N/A 1.047±0.00 4.788±0.54 0.745±0.00 N/A 6.263±0.00 N/A N/A N/A
ENSDART00000086149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000121550 N/A N/A N/A 10.009±0.00 N/A N/A 1.283±0.00 1.018±0.00 1.594±0.00 N/A 4.425±0.00 N/A N/A N/A
ENSDARG00000081051 ENSDART00000115620 N/A N/A N/A 296.194±0.00 N/A N/A 6.396±0.00 848.223±0.00 2.833±0.00 N/A N/A N/A N/A N/A
ENSDARG00000089360 ENSDART00000129792 N/A N/A N/A 91.128±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000097825 ENSDART00000153887 N/A N/A N/A 2.368±0.00 N/A N/A 0.529±0.00 0.849±0.00 0.837±0.00 N/A 1.180±0.00 N/A N/A N/A
ENSDART00000156513 N/A N/A N/A 2.018±0.00 N/A N/A 0.497±0.00 2.918±0.00 N/A N/A 1.159±0.00 N/A N/A N/A
ENSDART00000156960 N/A N/A N/A N/A N/A N/A N/A N/A 0.432±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139946 ENST00000267460 N/A 1.816±0.00 1.782±0.00 0.866±0.53 1.904±0.33 1.626±0.78 0.415±0.10 0.453±0.05 0.668±0.43 2.248±0.36 0.869±0.31 1.554±0.84 N/A 4.391±0.42
ENST00000559044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561019 N/A N/A N/A 2.603±0.00 6.172±0.00 5.047±0.00 1.225±0.00 1.113±0.00 N/A N/A 5.363±0.00 N/A N/A N/A
ENSG00000177350 ENST00000487479 0.303±0.00 0.881±0.00 N/A 0.089±0.00 0.271±0.00 0.143±0.00 0.038±0.00 0.216±0.00 0.077±0.00 0.458±0.00 0.652±0.00 N/A 0.112±0.00 N/A
ENST00000494676 0.035±0.00 0.060±0.00 0.209±0.00 N/A 0.036±0.00 0.076±0.00 N/A N/A N/A 0.024±0.00 0.106±0.00 0.072±0.03 N/A 0.881±0.44
ENSG00000200742 ENST00000363872 0.196±0.00 1.193±0.00 N/A 0.592±0.00 N/A N/A 0.350±0.00 N/A N/A N/A N/A 0.719±0.00 N/A N/A
ENSG00000258784 ENST00000554458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00
ENSG00000258791 ENST00000554186 N/A N/A N/A N/A N/A 0.280±0.00 N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A
ENST00000554196 0.099±0.00 0.130±0.00 N/A 0.342±0.00 0.025±0.00 0.047±0.00 0.268±0.00 0.363±0.00 N/A 0.100±0.00 0.190±0.00 0.209±0.02 N/A 0.139±0.00
ENST00000554221 N/A 0.245±0.00 N/A 0.082±0.00 N/A 0.037±0.00 N/A N/A N/A N/A N/A 0.413±0.30 0.030±0.00 0.036±0.00
ENST00000556417 N/A N/A N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A
ENST00000560267 N/A N/A N/A N/A 0.234±0.00 N/A N/A N/A N/A 0.198±0.00 N/A 0.798±0.00 0.172±0.00 N/A
ENST00000560336 N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A N/A 0.323±0.00 N/A N/A
ENSG00000259868 ENST00000569625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.00
ENST00000612704 N/A N/A N/A 0.044±0.00 0.085±0.00 0.079±0.00 0.080±0.00 N/A N/A N/A 0.089±0.00 0.648±0.67 0.042±0.00 0.175±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021843 ENSMUST00000022391 N/A N/A 6.388±0.66 N/A N/A N/A N/A N/A 0.968±0.14 N/A 9.728±0.63 11.049±0.43 6.156±3.13 N/A
ENSMUST00000185343 N/A N/A N/A 5.072±0.37 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186627 N/A N/A 5.129±0.41 N/A N/A N/A N/A N/A 1.862±0.31 N/A N/A 4.897±1.04 6.836±2.96 N/A
ENSMUST00000186700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.920±0.00 15.239±0.00 20.674±0.00 6.125±0.00
ENSMUST00000187039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187262 N/A N/A N/A 16.069±0.00 N/A N/A N/A N/A 1.569±0.00 N/A 6.337±0.00 35.371±0.00 19.028±12.24 2.864±0.00
ENSMUST00000187839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188330 N/A N/A N/A 24.820±0.00 N/A N/A N/A N/A N/A N/A N/A 3.836±0.00 N/A N/A
ENSMUST00000188553 N/A N/A N/A 22.982±0.00 N/A N/A N/A N/A N/A N/A 7.581±0.83 N/A N/A 4.159±0.00
ENSMUST00000189101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189986 N/A N/A N/A N/A N/A N/A N/A N/A 1.028±0.14 N/A N/A 4.409±0.54 N/A N/A
ENSMUST00000190164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.801±0.00 15.734±9.64 N/A
ENSMUST00000190252 1.755±1.29 5.202±1.17 5.095±0.58 7.148±0.34 2.033±0.35 1.075±0.00 6.392±0.66 0.818±0.53 1.380±0.57 2.598±0.37 11.972±1.40 2.869±1.40 4.760±1.70 N/A
ENSMUST00000190535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190857 1.472±0.39 1.459±0.22 4.434±0.85 6.293±0.82 2.810±1.36 1.322±0.62 3.268±0.35 0.676±0.13 0.985±0.54 1.435±0.26 N/A 2.647±1.13 N/A 0.142±0.05
ENSMUST00000190999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000021846 ENSMUST00000073150 9.588±0.56 5.463±2.21 10.844±1.61 3.229±1.27 5.367±0.54 6.496±0.99 2.360±0.29 11.176±1.04 2.851±1.97 7.861±1.22 1.783±0.17 13.988±5.14 0.984±0.70 17.755±8.23
ENSMUSG00000062081 ENSMUST00000180532 5.817±2.03 2.425±0.92 3.071±1.66 2.045±1.60 2.160±0.74 1.259±0.97 1.867±0.38 2.816±1.10 1.664±0.84 1.924±0.50 1.058±0.41 2.960±1.91 0.785±0.24 1.015±0.17
ENSMUSG00000063885 ENSMUST00000081029 0.167±0.14 N/A 0.134±0.02 0.062±0.03 0.147±0.06 0.235±0.09 0.081±0.05 0.213±0.16 0.037±0.02 0.133±0.05 0.094±0.00 0.166±0.07 0.033±0.01 0.142±0.09
ENSMUST00000181413 0.178±0.03 0.090±0.02 0.035±0.00 0.085±0.05 0.357±0.29 0.224±0.16 0.114±0.01 0.170±0.11 0.056±0.04 0.216±0.09 0.029±0.00 0.260±0.22 0.036±0.02 0.139±0.00

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