C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00061U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205744-ENSG00000104833 CGP 9606 19:6467207-6502848
GeneTranscriptPositionBiotype
ENSG00000104833 (TUBB4A)
tubulin, beta 4A class IVa 		ENST00000264071 (TUBB4A-001) 6494319-6502584 protein_coding
ENST00000540257 (TUBB4A-201) 6494321-6502293 protein_coding
ENST00000594075 (TUBB4A-009) 6495807-6502309 protein_coding
ENST00000594276 (TUBB4A-010) 6495722-6502309 protein_coding
ENST00000594290 (TUBB4A-012) 6496170-6502309 nonsense_mediated_decay
ENST00000595324 (TUBB4A-011) 6495905-6502309 nonsense_mediated_decay
ENST00000596291 (TUBB4A-014) 6496061-6501787 protein_coding
ENST00000596926 (TUBB4A-013) 6496142-6502309 protein_coding
ENST00000597686 (TUBB4A-005) 6496131-6502844 protein_coding
ENST00000598006 (TUBB4A-008) 6496016-6502337 protein_coding
ENST00000598635 (TUBB4A-006) 6496179-6502803 protein_coding
ENST00000600216 (TUBB4A-015) 6495808-6502309 protein_coding
ENST00000601152 (TUBB4A-007) 6495959-6502338 protein_coding
ENST00000601640 (TUBB4A-004) 6496176-6502848 protein_coding
ENSG00000130545 (CRB3)
crumbs family member 3 		ENST00000308243 (CRB3-004) 6464531-6466769 protein_coding
ENST00000356762 (CRB3-001) 6464283-6467221 protein_coding
ENST00000598494 (CRB3-003) 6463777-6467221 protein_coding
ENST00000600229 (CRB3-002) 6464279-6467221 protein_coding
ENSG00000205744 (DENND1C)
DENN/MADD domain containing 1C 		ENST00000381480 (DENND1C-001) 6467207-6481808 protein_coding
ENST00000543576 (DENND1C-014) 6467498-6481787 protein_coding
ENST00000586046 (DENND1C-015) 6477093-6481798 nonsense_mediated_decay
ENST00000588421 (DENND1C-005) 6477428-6481753 protein_coding
ENST00000588988 (DENND1C-008) 6476028-6478800 retained_intron
ENST00000589491 (DENND1C-007) 6476851-6477588 retained_intron
ENST00000590173 (DENND1C-003) 6477086-6481787 protein_coding
ENST00000590444 (DENND1C-009) 6467207-6476246 retained_intron
ENST00000590473 (DENND1C-012) 6477218-6482557 protein_coding
ENST00000590818 (DENND1C-010) 6467208-6476215 retained_intron
ENST00000590867 (DENND1C-002) 6467210-6480289 nonsense_mediated_decay
ENST00000591030 (DENND1C-004) 6477112-6481798 processed_transcript
ENST00000591795 (DENND1C-013) 6467950-6469651 retained_intron
ENST00000592543 (DENND1C-011) 6476494-6481774 retained_intron
ENSG00000268191 (CTD-2396E7.10)
 ENST00000596027 (CTD-2396E7.10-001) 6494320-6495025 antisense
ENSG00000268203 (CTD-2396E7.9)
 ENST00000599292 (CTD-2396E7.9-001) 6494320-6494805 antisense
ENSG00000275234 (CTD-2396E7.11)
 ENST00000615487 (CTD-2396E7.11-001) 6469465-6470152 antisense
CIL_00061U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002668-ENSMUSG00000062591 CGP 10090 17:57066056-57087782
GeneTranscriptPositionBiotype
ENSMUSG00000002668 (Dennd1c)
DENN/MADD domain containing 1C 		ENSMUST00000011623 (Dennd1c-201) 57066056-57078510 protein_coding
ENSMUSG00000062591 (Tubb4a)
tubulin, beta 4A class IVA 		ENSMUST00000071135 (Tubb4a-201) 57080066-57087782 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061U_0001ENSG00000104833ENST00000264071ENST00000540257ENST00000594075ENST00000594276ENST00000594290ENST00000595324ENST00000596291ENST00000596926ENST00000597686ENST00000598006ENST00000598635ENST00000600216ENST00000601152ENST00000601640ENSG00000130545ENST00000308243ENST00000356762ENST00000598494ENST00000600229ENSG00000205744ENST00000381480ENST00000543576ENST00000586046ENST00000588421ENST00000588988ENST00000589491ENST00000590173ENST00000590444ENST00000590473ENST00000590818ENST00000590867ENST00000591030ENST00000591795ENST00000592543ENSG00000268191ENST00000596027ENSG00000268203ENST00000599292ENSG00000275234ENST00000615487CIL_00061U_0002ENSMUSG00000002668ENSMUST00000011623ENSMUSG00000062591ENSMUST00000071135
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061U_0001ENSG00000104833ENST00000264071ENST00000540257ENST00000594075ENST00000596926ENST00000598006ENST00000600216ENSG00000130545ENST00000308243ENST00000356762ENST00000600229ENSG00000205744ENST00000381480ENST00000543576ENST00000590444ENST00000590473ENST00000590818ENST00000590867ENST00000591795ENSG00000268191ENST00000596027ENSG00000268203ENST00000599292ENSG00000275234ENST00000615487CIL_00061U_0002ENSMUSG00000002668ENSMUST00000011623ENSMUSG00000062591ENSMUST00000071135
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104833 ENST00000264071 0.132±0.00 0.268±0.00 0.086±0.00 298.033±289.01 0.427±0.00 1.059±0.83 0.745±0.00 1.063±0.00 0.191±0.00 N/A N/A 0.759±0.00 0.800±0.00 18.497±8.19
ENST00000540257 0.402±0.00 0.126±0.00 0.381±0.00 26.896±0.00 N/A N/A N/A 0.849±0.00 0.283±0.00 0.164±0.08 N/A 0.111±0.00 0.256±0.00 N/A
ENST00000594075 N/A N/A 0.333±0.00 N/A N/A N/A N/A N/A 0.620±0.00 N/A N/A N/A N/A N/A
ENST00000594276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596926 0.623±0.00 1.919±0.00 N/A N/A 0.807±0.00 N/A 1.071±0.00 N/A N/A 1.504±0.00 0.163±0.00 0.245±0.00 N/A N/A
ENST00000597686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.349±0.00 N/A N/A
ENST00000598635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600216 N/A N/A N/A N/A 0.150±0.00 N/A N/A N/A N/A N/A 2.794±0.00 N/A N/A N/A
ENST00000601152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000130545 ENST00000308243 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.088±0.00 N/A N/A N/A N/A
ENST00000356762 N/A N/A N/A N/A N/A N/A N/A N/A 12.618±0.00 N/A N/A 1.882±0.00 N/A N/A
ENST00000598494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600229 N/A N/A 1.135±0.00 N/A N/A 2.045±0.00 N/A 8.794±5.94 N/A 11.879±0.00 N/A 5.367±3.18 7.670±3.06 N/A
ENSG00000205744 ENST00000381480 N/A 4.669±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543576 0.282±0.00 7.727±0.00 N/A N/A N/A N/A 0.145±0.13 N/A 0.118±0.00 N/A 0.097±0.08 N/A 2.478±0.10 N/A
ENST00000586046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590444 0.306±0.00 N/A 0.372±0.00 N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A
ENST00000590473 N/A N/A N/A N/A N/A N/A 0.365±0.00 N/A 2.197±0.00 N/A N/A N/A N/A N/A
ENST00000590818 N/A N/A N/A 0.209±0.11 N/A 0.701±0.00 N/A N/A N/A 0.469±0.00 N/A N/A N/A N/A
ENST00000590867 N/A 4.593±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591795 N/A N/A N/A N/A N/A 1.552±0.00 N/A N/A 0.507±0.00 2.187±0.00 N/A 2.601±0.00 N/A 1.405±0.46
ENST00000592543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000268191 ENST00000596027 1.015±0.00 1.047±0.00 N/A 496.344±477.06 0.514±0.00 8.758±0.00 1.048±0.95 3.577±0.00 0.425±0.00 1.253±0.00 3.816±0.00 7.464±6.16 0.929±0.32 36.202±13.59
ENSG00000268203 ENST00000599292 N/A N/A N/A N/A N/A N/A N/A N/A 1.339±0.00 N/A N/A N/A 1.805±0.00 N/A
ENSG00000275234 ENST00000615487 N/A N/A 2.254±0.00 0.443±0.00 1.106±0.36 4.769±0.87 0.111±0.00 10.857±9.45 10.462±0.00 13.828±0.00 N/A 3.657±2.81 4.509±1.59 1.486±0.70
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002668 ENSMUST00000011623 2.276±0.44 0.950±0.25 2.173±0.06 0.761±0.44 10.735±4.50 1.063±0.41 0.987±0.49 0.832±0.31 1.125±0.92 2.565±1.15 0.187±0.10 0.899±0.35 0.646±0.28 0.088±0.02
ENSMUSG00000062591 ENSMUST00000071135 4.575±2.45 1.357±0.23 1.679±0.73 91.503±60.74 2.601±1.03 3.305±0.52 1.263±0.49 0.761±0.19 0.187±0.12 13.793±0.45 0.418±0.08 2.174±0.68 21.996±13.89 0.027±0.02

Loading