C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00062M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151893-ENSG00000188613 CGP 9606 10:118674167-119033732
GeneTranscriptPositionBiotype
ENSG00000107581 (EIF3A)
eukaryotic translation initiation factor 3, subunit A 		ENST00000369144 (EIF3A-001) 119033670-119080804 protein_coding
ENST00000462527 (EIF3A-002) 119056876-119059890 retained_intron
ENST00000541549 (EIF3A-201) 119035793-119080823 protein_coding
ENSG00000151893 (CACUL1)
CDK2-associated, cullin domain 1 		ENST00000369151 (CACUL1-001) 118676411-118755246 protein_coding
ENST00000477583 (CACUL1-004) 118729175-118754477 retained_intron
ENST00000481360 (CACUL1-005) 118694921-118707513 retained_intron
ENST00000489169 (CACUL1-006) 118685997-118691565 retained_intron
ENST00000490610 (CACUL1-007) 118685959-118686781 retained_intron
ENST00000493518 (CACUL1-002) 118684556-118755249 nonsense_mediated_decay
ENST00000544392 (CACUL1-008) 118674167-118726385 processed_transcript
ENSG00000213574 (LDHAP5)
lactate dehydrogenase A pseudogene 5 		ENST00000394996 (LDHAP5-001) 118932674-118933295 processed_pseudogene
ENSG00000229272 (RP11-498J9.2)
 ENST00000437838 (RP11-498J9.2-001) 119003536-119003884 antisense
ENSG00000236058 (RP11-215A21.2)
 ENST00000420302 (RP11-215A21.2-001) 118872054-118872602 processed_pseudogene
ENSG00000277687 (RP11-427L15.2)
 ENST00000613826 (RP11-427L15.2-001) 118692361-118693535 sense_intronic

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00062M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033417-ENSMUSG00000072437 CGP 10090 19:60524696-60759913
GeneTranscriptPositionBiotype
ENSMUSG00000033417 (Cacul1)
CDK2 associated, cullin domain 1 		ENSMUST00000081790 (Cacul1-201) 60524696-60581023 protein_coding
ENSMUST00000111460 (Cacul1-202) 60524696-60581023 protein_coding
ENSMUST00000166712 (Cacul1-203) 60524696-60581023 protein_coding
ENSMUSG00000072437 (Nanos1)
nanos homolog 1 (Drosophila) 		ENSMUST00000088237 (Nanos1-201) 60755987-60759913 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062M_0001ENSG00000107581ENST00000369144ENST00000462527ENST00000541549ENSG00000151893ENST00000369151ENST00000477583ENST00000481360ENST00000489169ENST00000490610ENST00000493518ENST00000544392ENSG00000213574ENST00000394996ENSG00000229272ENST00000437838ENSG00000236058ENST00000420302ENSG00000277687ENST00000613826CIL_00062M_0002ENSMUSG00000033417ENSMUST00000081790ENSMUST00000111460ENSMUST00000166712ENSMUSG00000072437ENSMUST00000088237
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062M_0001ENSG00000107581ENST00000369144ENST00000541549ENSG00000151893ENST00000369151ENST00000489169ENST00000493518ENSG00000213574ENST00000394996ENSG00000229272ENST00000437838ENSG00000236058ENST00000420302ENSG00000277687ENST00000613826CIL_00062M_0002ENSMUSG00000033417ENSMUST00000081790ENSMUST00000111460ENSMUST00000166712ENSMUSG00000072437ENSMUST00000088237
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107581 ENST00000369144 14.844±0.00 16.589±0.00 1.025±0.00 5.287±3.66 10.801±6.69 11.283±7.52 2.393±1.09 3.138±0.96 6.399±3.58 6.809±3.96 18.363±16.61 10.963±4.02 8.771±0.44 10.647±6.15
ENST00000462527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541549 19.376±0.00 N/A N/A 8.747±6.33 11.611±2.98 12.825±3.41 12.474±9.11 9.784±4.75 10.768±0.00 7.684±1.56 52.091±0.00 19.580±6.64 21.367±20.77 20.351±8.89
ENSG00000151893 ENST00000369151 1.417±0.00 1.347±0.00 1.017±0.00 1.893±0.39 2.907±1.51 0.870±0.00 0.659±0.00 0.979±0.03 1.781±0.71 2.494±0.25 1.220±0.67 2.032±0.81 1.400±0.10 3.511±1.63
ENST00000477583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.553±0.00
ENST00000490610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493518 3.377±0.00 N/A 2.010±0.00 2.369±0.73 4.713±0.00 4.237±0.00 2.347±0.85 N/A 6.172±0.00 2.706±0.00 2.372±0.28 8.724±0.00 N/A 4.734±0.00
ENST00000544392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213574 ENST00000394996 0.109±0.00 0.023±0.00 N/A 0.023±0.00 0.068±0.00 0.116±0.10 N/A 0.067±0.00 0.061±0.00 0.021±0.00 N/A N/A 0.043±0.00 N/A
ENSG00000229272 ENST00000437838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.336±0.00
ENSG00000236058 ENST00000420302 0.098±0.00 0.103±0.00 0.116±0.00 0.026±0.00 0.051±0.00 0.260±0.00 0.023±0.00 0.128±0.00 0.023±0.00 0.143±0.00 0.204±0.00 0.101±0.03 0.109±0.00 0.074±0.02
ENSG00000277687 ENST00000613826 0.641±0.00 0.983±0.00 0.415±0.00 0.847±0.18 1.419±0.82 0.058±0.00 0.344±0.17 0.121±0.00 0.246±0.19 0.721±0.22 0.053±0.00 0.631±0.21 0.074±0.04 0.703±0.39
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033417 ENSMUST00000081790 5.673±0.97 3.589±1.93 4.878±1.20 5.395±2.18 4.505±0.55 3.283±1.55 3.477±0.28 7.823±0.82 5.760±1.39 5.285±0.32 6.392±0.22 4.029±1.83 10.713±4.65 9.174±2.86
ENSMUST00000111460 N/A 3.368±1.93 N/A N/A 1.600±0.35 1.831±0.95 N/A N/A N/A N/A N/A 2.534±1.12 N/A N/A
ENSMUST00000166712 N/A 1.985±0.00 1.074±0.36 3.091±0.00 N/A 1.961±0.28 0.376±0.00 1.188±0.13 0.675±0.11 0.997±0.20 N/A 3.116±0.00 N/A 4.435±2.92
ENSMUSG00000072437 ENSMUST00000088237 0.138±0.09 0.653±0.09 0.325±0.02 4.910±2.15 0.638±0.51 0.505±0.05 0.080±0.02 0.094±0.03 0.592±0.61 0.461±0.14 0.019±0.01 1.743±0.95 0.231±0.16 0.258±0.14

Loading