C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00062M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151893-ENSG00000188613 CGP 9606 10:118674167-119033732
GeneTranscriptPositionBiotype
ENSG00000107581 (EIF3A)
eukaryotic translation initiation factor 3, subunit A 		ENST00000369144 (EIF3A-001) 119033670-119080804 protein_coding
ENST00000462527 (EIF3A-002) 119056876-119059890 retained_intron
ENST00000541549 (EIF3A-201) 119035793-119080823 protein_coding
ENSG00000151893 (CACUL1)
CDK2-associated, cullin domain 1 		ENST00000369151 (CACUL1-001) 118676411-118755246 protein_coding
ENST00000477583 (CACUL1-004) 118729175-118754477 retained_intron
ENST00000481360 (CACUL1-005) 118694921-118707513 retained_intron
ENST00000489169 (CACUL1-006) 118685997-118691565 retained_intron
ENST00000490610 (CACUL1-007) 118685959-118686781 retained_intron
ENST00000493518 (CACUL1-002) 118684556-118755249 nonsense_mediated_decay
ENST00000544392 (CACUL1-008) 118674167-118726385 processed_transcript
ENSG00000213574 (LDHAP5)
lactate dehydrogenase A pseudogene 5 		ENST00000394996 (LDHAP5-001) 118932674-118933295 processed_pseudogene
ENSG00000229272 (RP11-498J9.2)
 ENST00000437838 (RP11-498J9.2-001) 119003536-119003884 antisense
ENSG00000236058 (RP11-215A21.2)
 ENST00000420302 (RP11-215A21.2-001) 118872054-118872602 processed_pseudogene
ENSG00000277687 (RP11-427L15.2)
 ENST00000613826 (RP11-427L15.2-001) 118692361-118693535 sense_intronic
CIL_00062M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033417-ENSMUSG00000072437 CGP 10090 19:60524696-60759913
GeneTranscriptPositionBiotype
ENSMUSG00000033417 (Cacul1)
CDK2 associated, cullin domain 1 		ENSMUST00000081790 (Cacul1-201) 60524696-60581023 protein_coding
ENSMUST00000111460 (Cacul1-202) 60524696-60581023 protein_coding
ENSMUST00000166712 (Cacul1-203) 60524696-60581023 protein_coding
ENSMUSG00000072437 (Nanos1)
nanos homolog 1 (Drosophila) 		ENSMUST00000088237 (Nanos1-201) 60755987-60759913 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062M_0001ENSG00000107581ENST00000369144ENST00000462527ENST00000541549ENSG00000151893ENST00000369151ENST00000477583ENST00000481360ENST00000489169ENST00000490610ENST00000493518ENST00000544392ENSG00000213574ENST00000394996ENSG00000229272ENST00000437838ENSG00000236058ENST00000420302ENSG00000277687ENST00000613826CIL_00062M_0002ENSMUSG00000033417ENSMUST00000081790ENSMUST00000111460ENSMUST00000166712ENSMUSG00000072437ENSMUST00000088237
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062M_0001ENSG00000107581ENST00000369144ENST00000541549ENSG00000151893ENST00000369151ENST00000489169ENST00000493518ENSG00000213574ENST00000394996ENSG00000229272ENST00000437838ENSG00000236058ENST00000420302ENSG00000277687ENST00000613826CIL_00062M_0002ENSMUSG00000033417ENSMUST00000081790ENSMUST00000111460ENSMUST00000166712ENSMUSG00000072437ENSMUST00000088237
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107581 ENST00000369144 14.844±0.00 16.589±0.00 1.025±0.00 5.287±3.66 10.801±6.69 11.283±7.52 2.393±1.09 3.138±0.96 6.399±3.58 6.809±3.96 18.363±16.61 10.963±4.02 8.771±0.44 10.647±6.15
ENST00000462527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541549 19.376±0.00 N/A N/A 8.747±6.33 11.611±2.98 12.825±3.41 12.474±9.11 9.784±4.75 10.768±0.00 7.684±1.56 52.091±0.00 19.580±6.64 21.367±20.77 20.351±8.89
ENSG00000151893 ENST00000369151 1.417±0.00 1.347±0.00 1.017±0.00 1.893±0.39 2.907±1.51 0.870±0.00 0.659±0.00 0.979±0.03 1.781±0.71 2.494±0.25 1.220±0.67 2.032±0.81 1.400±0.10 3.511±1.63
ENST00000477583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.553±0.00
ENST00000490610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493518 3.377±0.00 N/A 2.010±0.00 2.369±0.73 4.713±0.00 4.237±0.00 2.347±0.85 N/A 6.172±0.00 2.706±0.00 2.372±0.28 8.724±0.00 N/A 4.734±0.00
ENST00000544392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213574 ENST00000394996 0.109±0.00 0.023±0.00 N/A 0.023±0.00 0.068±0.00 0.116±0.10 N/A 0.067±0.00 0.061±0.00 0.021±0.00 N/A N/A 0.043±0.00 N/A
ENSG00000229272 ENST00000437838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.336±0.00
ENSG00000236058 ENST00000420302 0.098±0.00 0.103±0.00 0.116±0.00 0.026±0.00 0.051±0.00 0.260±0.00 0.023±0.00 0.128±0.00 0.023±0.00 0.143±0.00 0.204±0.00 0.101±0.03 0.109±0.00 0.074±0.02
ENSG00000277687 ENST00000613826 0.641±0.00 0.983±0.00 0.415±0.00 0.847±0.18 1.419±0.82 0.058±0.00 0.344±0.17 0.121±0.00 0.246±0.19 0.721±0.22 0.053±0.00 0.631±0.21 0.074±0.04 0.703±0.39
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033417 ENSMUST00000081790 5.673±0.97 3.589±1.93 4.878±1.20 5.395±2.18 4.505±0.55 3.283±1.55 3.477±0.28 7.823±0.82 5.760±1.39 5.285±0.32 6.392±0.22 4.029±1.83 10.713±4.65 9.174±2.86
ENSMUST00000111460 N/A 3.368±1.93 N/A N/A 1.600±0.35 1.831±0.95 N/A N/A N/A N/A N/A 2.534±1.12 N/A N/A
ENSMUST00000166712 N/A 1.985±0.00 1.074±0.36 3.091±0.00 N/A 1.961±0.28 0.376±0.00 1.188±0.13 0.675±0.11 0.997±0.20 N/A 3.116±0.00 N/A 4.435±2.92
ENSMUSG00000072437 ENSMUST00000088237 0.138±0.09 0.653±0.09 0.325±0.02 4.910±2.15 0.638±0.51 0.505±0.05 0.080±0.02 0.094±0.03 0.592±0.61 0.461±0.14 0.019±0.01 1.743±0.95 0.231±0.16 0.258±0.14

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