C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00062P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000063383-ENSDARG00000029218 CGP 7955 6:3749614-3852968
GeneTranscriptPositionBiotype
ENSDARG00000029218 (slc25a12)
solute carrier family 25 (mitochondrial carrier, Aralar), member 12 		ENSDART00000049827 (slc25a12-001) 3775245-3782184 protein_coding
ENSDART00000122718 (slc25a12-201) 3775246-3852968 protein_coding
ENSDART00000147214 (slc25a12-002) 3775849-3779361 processed_transcript
ENSDARG00000059190 (tlk1b)
tousled-like kinase 1b 		ENSDART00000009936 (tlk1b-001) 3693368-3739599 protein_coding
ENSDART00000082219 (tlk1b-201) 3693552-3794863 protein_coding
ENSDARG00000063383 (dync1i2b)
dynein, cytoplasmic 1, intermediate chain 2b 		ENSDART00000092571 (dync1i2b-201) 3749614-3770512 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00062P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000077380-ENSG00000115840 CGP 9606 2:171687409-171999859
GeneTranscriptPositionBiotype
ENSG00000077380 (DYNC1I2)
dynein, cytoplasmic 1, intermediate chain 2 		ENST00000340296 (DYNC1I2-002) 171687409-171748411 protein_coding
ENST00000397119 (DYNC1I2-001) 171687470-171748409 protein_coding
ENST00000409197 (DYNC1I2-006) 171687672-171748411 protein_coding
ENST00000409317 (DYNC1I2-005) 171687708-171748011 protein_coding
ENST00000409453 (DYNC1I2-027) 171687776-171748420 protein_coding
ENST00000409773 (DYNC1I2-004) 171687744-171748416 protein_coding
ENST00000410079 (DYNC1I2-003) 171687471-171747989 protein_coding
ENST00000411953 (DYNC1I2-020) 171687755-171715350 protein_coding
ENST00000412370 (DYNC1I2-015) 171688011-171715368 protein_coding
ENST00000422646 (DYNC1I2-019) 171690145-171725677 protein_coding
ENST00000423910 (DYNC1I2-016) 171688303-171725650 protein_coding
ENST00000425485 (DYNC1I2-018) 171688303-171725946 protein_coding
ENST00000430778 (DYNC1I2-017) 171688310-171712779 protein_coding
ENST00000435234 (DYNC1I2-013) 171687881-171726913 protein_coding
ENST00000438879 (DYNC1I2-011) 171687472-171725713 protein_coding
ENST00000443458 (DYNC1I2-014) 171688006-171715351 protein_coding
ENST00000445378 (DYNC1I2-022) 171687792-171725955 nonsense_mediated_decay
ENST00000452242 (DYNC1I2-021) 171687409-171726081 protein_coding
ENST00000456808 (DYNC1I2-012) 171687705-171725693 protein_coding
ENST00000470286 (DYNC1I2-024) 171715390-171726852 retained_intron
ENST00000471482 (DYNC1I2-010) 171687472-171693084 retained_intron
ENST00000476551 (DYNC1I2-025) 171712402-171715376 retained_intron
ENST00000479806 (DYNC1I2-009) 171726558-171748407 retained_intron
ENST00000482454 (DYNC1I2-007) 171706890-171748409 retained_intron
ENST00000508530 (DYNC1I2-026) 171687501-171748411 protein_coding
ENSG00000115840 (SLC25A12)
solute carrier family 25 (aspartate/glutamate carrier), member 12 		ENST00000263812 (SLC25A12-006) 171784775-171894223 nonsense_mediated_decay
ENST00000422440 (SLC25A12-001) 171784370-171894252 protein_coding
ENST00000426896 (SLC25A12-007) 171834031-171894244 nonsense_mediated_decay
ENST00000464063 (SLC25A12-010) 171855927-171999859 processed_transcript
ENST00000472070 (SLC25A12-002) 171784832-171788942 retained_intron
ENST00000472748 (SLC25A12-009) 171844369-171999855 processed_transcript
ENST00000475360 (SLC25A12-003) 171837149-171893258 nonsense_mediated_decay
ENST00000484227 (SLC25A12-008) 171855801-171999792 processed_transcript
ENST00000485880 (SLC25A12-004) 171815109-171834335 retained_intron
ENST00000494892 (SLC25A12-005) 171809425-171810280 processed_transcript
ENSG00000128708 (HAT1)
histone acetyltransferase 1 		ENST00000264108 (HAT1-001) 171922465-171983682 protein_coding
ENST00000392584 (HAT1-006) 171964833-171980855 retained_intron
ENST00000412731 (HAT1-002) 171922448-171983682 nonsense_mediated_decay
ENST00000457761 (HAT1-003) 171922462-171979995 nonsense_mediated_decay
ENST00000460481 (HAT1-005) 171922462-171923475 processed_transcript
ENST00000494601 (HAT1-004) 171922607-171983623 retained_intron
ENSG00000172878 (METAP1D)
methionyl aminopeptidase type 1D (mitochondrial) 		ENST00000315796 (METAP1D-001) 171999583-172082430 protein_coding
ENST00000392582 (METAP1D-006) 172065604-172072454 processed_transcript
ENST00000468537 (METAP1D-007) 172070663-172080479 processed_transcript
ENST00000488581 (METAP1D-005) 172061573-172080499 processed_transcript
ENST00000491440 (METAP1D-004) 172021799-172063750 processed_transcript
ENST00000493035 (METAP1D-002) 171999943-172064414 processed_transcript
ENST00000493742 (METAP1D-003) 171999955-172061994 processed_transcript
ENSG00000228389 (AC068039.4)
 ENST00000416361 (AC068039.4-001) 171773482-171775844 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00062P_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027012-ENSMUSG00000027010 CGP 10090 2:71211706-71367749
GeneTranscriptPositionBiotype
ENSMUSG00000027012 (Dync1i2)
dynein cytoplasmic 1 intermediate chain 2 		ENSMUST00000081710 (Dync1i2-001) 71211834-71263303 protein_coding
ENSMUST00000100028 (Dync1i2-002) 71211984-71262859 protein_coding
ENSMUST00000112136 (Dync1i2-009) 71211992-71263303 protein_coding
ENSMUST00000112138 (Dync1i2-005) 71211758-71263291 protein_coding
ENSMUST00000112139 (Dync1i2-006) 71211741-71263294 protein_coding
ENSMUST00000112140 (Dync1i2-007) 71211741-71263303 protein_coding
ENSMUST00000112142 (Dync1i2-003) 71211706-71263298 protein_coding
ENSMUST00000112144 (Dync1i2-008) 71211972-71263297 protein_coding
ENSMUST00000137683 (Dync1i2-010) 71234799-71260349 retained_intron
ENSMUST00000138613 (Dync1i2-004) 71260547-71263058 retained_intron
ENSMUST00000141619 (Dync1i2-012) 71211806-71247019 processed_transcript
ENSMUST00000149735 (Dync1i2-011) 71212004-71230541 retained_intron
ENSMUSG00000082190 (Gm13641)
predicted gene 13641 		ENSMUST00000117993 (Gm13641-001) 71319783-71320255 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062P_0001ENSDARG00000029218ENSDART00000049827ENSDART00000122718ENSDART00000147214ENSDARG00000059190ENSDART00000009936ENSDART00000082219ENSDARG00000063383ENSDART00000092571CIL_00062P_0002ENSG00000077380ENST00000340296ENST00000397119ENST00000409197ENST00000409317ENST00000409453ENST00000409773ENST00000410079ENST00000411953ENST00000412370ENST00000422646ENST00000423910ENST00000425485ENST00000430778ENST00000435234ENST00000438879ENST00000443458ENST00000445378ENST00000452242ENST00000456808ENST00000470286ENST00000471482ENST00000476551ENST00000479806ENST00000482454ENST00000508530ENSG00000115840ENST00000263812ENST00000422440ENST00000426896ENST00000464063ENST00000472070ENST00000472748ENST00000475360ENST00000484227ENST00000485880ENST00000494892ENSG00000128708ENST00000264108ENST00000392584ENST00000412731ENST00000457761ENST00000460481ENST00000494601ENSG00000172878ENST00000315796ENST00000392582ENST00000468537ENST00000488581ENST00000491440ENST00000493035ENST00000493742ENSG00000228389ENST00000416361CIL_00062P_0003ENSMUSG00000027012ENSMUST00000081710ENSMUST00000100028ENSMUST00000112136ENSMUST00000112138ENSMUST00000112139ENSMUST00000112140ENSMUST00000112142ENSMUST00000112144ENSMUST00000137683ENSMUST00000138613ENSMUST00000141619ENSMUST00000149735ENSMUSG00000082190ENSMUST00000117993
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00062P_0001ENSDARG00000029218ENSDART00000049827ENSDART00000122718ENSDARG00000059190ENSDART00000009936ENSDART00000082219ENSDARG00000063383ENSDART00000092571CIL_00062P_0002ENSG00000077380ENST00000340296ENST00000409197ENST00000409317ENST00000409453ENST00000409773ENST00000410079ENST00000452242ENST00000456808ENST00000470286ENST00000479806ENST00000482454ENST00000508530ENSG00000115840ENST00000263812ENST00000422440ENST00000426896ENSG00000128708ENST00000264108ENST00000412731ENST00000494601ENSG00000172878ENST00000315796ENST00000493035ENSG00000228389ENST00000416361CIL_00062P_0003ENSMUSG00000027012ENSMUST00000081710ENSMUST00000100028ENSMUST00000112138ENSMUST00000112139ENSMUST00000112142ENSMUST00000112144ENSMUST00000141619ENSMUSG00000082190ENSMUST00000117993
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000029218 ENSDART00000049827 N/A N/A N/A 4.641±0.00 N/A N/A 5.948±7.21 N/A N/A N/A 13.944±0.00 N/A N/A N/A
ENSDART00000122718 N/A N/A N/A 18.250±2.23 N/A N/A 40.568±3.38 10.259±0.00 2.527±0.00 N/A 29.947±0.00 N/A N/A N/A
ENSDART00000147214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000059190 ENSDART00000009936 N/A N/A N/A N/A N/A N/A 4.849±4.38 0.688±0.23 0.999±0.00 N/A N/A N/A N/A N/A
ENSDART00000082219 N/A N/A N/A N/A N/A N/A N/A N/A 0.572±0.00 N/A N/A N/A N/A N/A
ENSDARG00000063383 ENSDART00000092571 N/A N/A N/A 5.625±5.42 N/A N/A 7.148±0.70 0.922±0.44 0.492±0.00 N/A 2.315±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000077380 ENST00000340296 N/A 2.461±0.00 1.779±0.00 N/A N/A 2.767±0.00 1.932±0.00 4.147±0.00 1.151±0.00 N/A 4.738±0.00 4.633±0.72 12.806±0.20 9.900±0.06
ENST00000397119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409197 13.628±0.00 9.891±0.00 4.944±0.00 15.682±9.78 9.886±4.11 14.548±8.86 6.159±4.16 4.896±0.00 6.720±3.64 9.778±5.08 2.336±0.64 14.051±6.46 13.928±1.35 13.870±0.00
ENST00000409317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.370±0.00 11.241±0.00 N/A 15.890±0.00
ENST00000409453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.747±0.00
ENST00000409773 N/A N/A N/A 3.358±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000410079 N/A N/A N/A 3.924±0.00 4.321±0.00 N/A N/A N/A N/A 4.612±0.00 N/A 15.032±10.05 19.262±0.00 13.871±0.00
ENST00000411953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452242 N/A N/A 4.844±0.00 6.337±0.00 N/A 5.436±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.494±0.00 N/A
ENST00000470286 N/A N/A N/A 20.934±0.00 23.920±0.00 17.465±0.00 6.091±0.00 9.488±0.00 17.716±0.00 16.558±0.00 N/A 28.034±0.00 N/A N/A
ENST00000471482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.356±0.00 N/A N/A
ENST00000482454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.685±0.00 N/A N/A N/A
ENST00000508530 4.039±0.00 2.258±0.00 N/A 9.504±0.00 N/A N/A 2.990±0.00 3.479±0.00 N/A 2.664±0.00 1.758±0.00 4.130±0.00 N/A N/A
ENSG00000115840 ENST00000263812 0.602±0.00 N/A N/A N/A 1.521±0.00 2.662±0.00 20.344±0.00 4.305±0.00 N/A 1.041±0.00 11.825±1.87 2.739±1.05 1.579±0.58 1.693±0.54
ENST00000422440 2.903±0.00 5.274±0.00 2.606±0.00 15.159±2.12 3.850±0.16 5.826±0.00 15.622±3.39 6.418±0.00 1.489±0.97 1.007±0.36 9.564±2.04 3.906±1.30 1.545±0.77 3.713±0.00
ENST00000426896 N/A N/A N/A N/A N/A N/A N/A 0.480±0.00 N/A N/A N/A N/A N/A N/A
ENST00000464063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000128708 ENST00000264108 9.312±0.00 13.684±0.00 2.513±0.00 7.947±2.63 10.170±1.04 9.548±1.39 6.779±2.84 9.215±4.72 5.852±0.94 8.334±3.48 8.182±7.31 17.178±2.74 8.848±2.14 13.261±5.68
ENST00000392584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412731 2.893±0.00 N/A 1.583±0.00 3.326±0.00 N/A N/A 0.872±0.00 1.509±0.00 N/A 3.570±0.00 2.326±0.00 15.215±13.36 12.203±0.00 6.393±0.00
ENST00000457761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.647±0.00
ENSG00000172878 ENST00000315796 0.586±0.00 2.134±0.00 N/A N/A 1.923±0.00 N/A N/A 1.394±0.52 1.476±0.00 0.838±0.00 N/A 3.090±0.83 0.641±0.17 1.565±0.10
ENST00000392582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493035 N/A N/A 2.433±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228389 ENST00000416361 0.811±0.00 1.750±0.00 1.249±0.00 0.573±0.29 0.618±0.00 0.553±0.13 0.344±0.01 0.512±0.32 0.574±0.07 0.684±0.07 0.322±0.16 0.568±0.26 0.197±0.11 1.436±0.64
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027012 ENSMUST00000081710 3.264±0.00 2.010±0.88 14.850±0.16 N/A 2.759±0.53 2.219±0.54 2.468±0.66 3.259±0.36 6.103±4.29 3.604±0.68 7.846±1.46 4.475±2.12 8.931±3.48 7.452±1.32
ENSMUST00000100028 N/A 1.497±0.09 N/A 66.089±0.00 N/A 3.341±0.93 N/A N/A N/A N/A N/A 20.263±17.82 42.192±6.57 29.050±0.00
ENSMUST00000112136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112138 18.065±2.78 5.086±1.36 18.920±2.46 N/A 10.414±3.07 8.486±2.17 10.123±0.43 13.642±2.87 10.197±2.23 17.127±2.44 6.634±1.22 15.416±14.60 24.464±4.35 23.147±0.40
ENSMUST00000112139 N/A N/A N/A N/A 3.227±0.00 2.751±0.94 2.540±0.00 N/A 1.637±0.50 N/A N/A 4.740±2.55 N/A N/A
ENSMUST00000112140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112142 N/A 1.166±0.00 N/A 52.687±3.58 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112144 N/A N/A N/A 17.618±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.964±0.00 25.060±0.00 24.853±0.00
ENSMUST00000149735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082190 ENSMUST00000117993 0.659±0.00 0.284±0.00 0.129±0.10 0.269±0.00 0.137±0.00 N/A 0.334±0.11 0.221±0.01 0.060±0.04 0.173±0.02 N/A 0.563±0.44 0.083±0.04 0.102±0.00

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