C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000632_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000068050-ENSDARG00000068050 CGP 7955 8:15825821-16510926
GeneTranscriptPositionBiotype
ENSDARG00000075624 (bend5)
BEN domain containing 5 		ENSDART00000111314 (bend5-201) 16020966-16037550 protein_coding
ENSDART00000133114 (bend5-001) 16019736-16037858 protein_coding
ENSDARG00000096772 (si:ch211-221e5.1)
si:ch211-221e5.1 		ENSDART00000153432 (si:ch211-221e5.1-001) 15993576-15996758 lincRNA

Danio rerio Ensembl (Zv9)

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CIL_000632_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186094-ENSG00000186094 CGP 9606 1:48532855-50023913
GeneTranscriptPositionBiotype
ENSG00000162373 (BEND5)
BEN domain containing 5 		ENST00000371833 (BEND5-001) 48727523-48776918 protein_coding
ENST00000463562 (BEND5-002) 48727870-48776932 retained_intron
ENST00000476079 (BEND5-004) 48727867-48758933 processed_transcript
ENST00000476096 (BEND5-005) 48727873-48759255 processed_transcript
ENST00000480399 (BEND5-003) 48759207-48776969 processed_transcript
ENST00000489956 (BEND5-006) 48761048-48776735 retained_intron
ENSG00000186094 (AGBL4)
ATP/GTP binding protein-like 4 		ENST00000334103 (AGBL4-201) 48534173-48663244 protein_coding
ENST00000371836 (AGBL4-003) 48817507-50023900 protein_coding
ENST00000371838 (AGBL4-004) 48634208-50023913 protein_coding
ENST00000371839 (AGBL4-001) 48532855-50023913 protein_coding
ENST00000416121 (AGBL4-002) 48583870-49045714 protein_coding
ENST00000497451 (AGBL4-005) 49527228-49851518 processed_transcript
ENSG00000215887 (ZNF859P)
zinc finger protein 859, pseudogene 		ENST00000502859 (ZNF859P-001) 49841821-49846400 unprocessed_pseudogene
ENSG00000225623 (AGBL4-IT1)
AGBL4 intronic transcript 1 (non-protein coding) 		ENST00000457061 (AGBL4-IT1-001) 49374201-49472085 sense_intronic
ENSG00000229846 (RP11-141A19.1)
 ENST00000456002 (RP11-141A19.1-001) 49048316-49187585 antisense
ENSG00000230114 (RP11-141A19.2)
 ENST00000420071 (RP11-141A19.2-001) 49257411-49269285 antisense
ENSG00000233595 (MTND2P29)
MT-ND2 pseudogene 29 		ENST00000438595 (MTND2P29-001) 50017092-50017503 processed_pseudogene
ENSG00000237478 (RP5-926E3.1)
 ENST00000428836 (RP5-926E3.1-001) 49691262-49691523 processed_pseudogene
ENSG00000279324 (RP11-93G23.2)
 ENST00000622945 (RP11-93G23.2-001) 49994318-49996218 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_000632_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061298-ENSMUSG00000061298 CGP 10090 4:110397661-111664324
GeneTranscriptPositionBiotype
ENSMUSG00000028545 (Bend5)
BEN domain containing 5 		ENSMUST00000030274 (Bend5-001) 111415006-111460298 protein_coding
ENSMUST00000123667 (Bend5-005) 111433319-111459927 processed_transcript
ENSMUST00000129760 (Bend5-002) 111415088-111459920 processed_transcript
ENSMUST00000130523 (Bend5-004) 111415047-111433246 processed_transcript
ENSMUST00000138394 (Bend5-006) 111415207-111420538 processed_transcript
ENSMUST00000139876 (Bend5-003) 111433197-111460296 protein_coding
ENSMUSG00000061298 (Agbl4)
ATP/GTP binding protein-like 4 		ENSMUST00000080744 (Agbl4-010) 110397791-111657510 protein_coding
ENSMUST00000097920 (Agbl4-009) 110397791-111657510 protein_coding
ENSMUST00000106587 (Agbl4-004) 110397698-110662970 protein_coding
ENSMUST00000106589 (Agbl4-005) 110397661-110955596 protein_coding
ENSMUST00000106591 (Agbl4-003) 110397698-111567010 protein_coding
ENSMUST00000106592 (Agbl4-001) 110397698-111664324 protein_coding
ENSMUST00000136433 (Agbl4-006) 111118841-111259039 processed_transcript
ENSMUST00000142460 (Agbl4-008) 111566725-111657507 processed_transcript
ENSMUST00000148038 (Agbl4-002) 111118911-111620490 protein_coding
ENSMUST00000154123 (Agbl4-007) 111566695-111656569 processed_transcript
ENSMUSG00000081068 (Gm12804)
predicted gene 12804 		ENSMUST00000121030 (Gm12804-001) 111290118-111291116 processed_pseudogene
ENSMUSG00000081813 (Gm12806)
predicted gene 12806 		ENSMUST00000119384 (Gm12806-001) 110510035-110510302 processed_pseudogene
ENSMUSG00000082348 (Gm12807)
predicted gene 12807 		ENSMUST00000121546 (Gm12807-001) 110512771-110513732 processed_pseudogene
ENSMUSG00000083904 (Gm12805)
predicted gene 12805 		ENSMUST00000117305 (Gm12805-001) 111319558-111320605 processed_pseudogene
ENSMUSG00000084673 (n-R5s191)
nuclear encoded rRNA 5S 191 		ENSMUST00000122724 (n-R5s191-201) 111427818-111427933 rRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000632_0001ENSDARG00000075624ENSDART00000111314ENSDART00000133114ENSDARG00000096772ENSDART00000153432CIL_000632_0002ENSG00000162373ENST00000371833ENST00000463562ENST00000476079ENST00000476096ENST00000480399ENST00000489956ENSG00000186094ENST00000334103ENST00000371836ENST00000371838ENST00000371839ENST00000416121ENST00000497451ENSG00000215887ENST00000502859ENSG00000225623ENST00000457061ENSG00000229846ENST00000456002ENSG00000230114ENST00000420071ENSG00000233595ENST00000438595ENSG00000237478ENST00000428836ENSG00000279324ENST00000622945CIL_000632_0003ENSMUSG00000028545ENSMUST00000030274ENSMUST00000123667ENSMUST00000129760ENSMUST00000130523ENSMUST00000138394ENSMUST00000139876ENSMUSG00000061298ENSMUST00000080744ENSMUST00000097920ENSMUST00000106587ENSMUST00000106589ENSMUST00000106591ENSMUST00000106592ENSMUST00000136433ENSMUST00000142460ENSMUST00000148038ENSMUST00000154123ENSMUSG00000081068ENSMUST00000121030ENSMUSG00000081813ENSMUST00000119384ENSMUSG00000082348ENSMUST00000121546ENSMUSG00000083904ENSMUST00000117305ENSMUSG00000084673ENSMUST00000122724
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000632_0001ENSDARG00000075624ENSDART00000111314ENSDART00000133114ENSDARG00000096772ENSDART00000153432CIL_000632_0002ENSG00000162373ENST00000371833ENST00000463562ENST00000476079ENST00000476096ENST00000480399ENST00000489956ENSG00000186094ENST00000334103ENST00000371836ENST00000371838ENST00000371839ENST00000416121ENST00000497451ENSG00000215887ENST00000502859ENSG00000225623ENST00000457061ENSG00000229846ENST00000456002ENSG00000230114ENST00000420071ENSG00000233595ENST00000438595ENSG00000237478ENST00000428836ENSG00000279324ENST00000622945CIL_000632_0003ENSMUSG00000028545ENSMUST00000030274ENSMUST00000123667ENSMUST00000129760ENSMUST00000130523ENSMUST00000139876ENSMUSG00000061298ENSMUST00000080744ENSMUST00000097920ENSMUST00000106587ENSMUST00000106589ENSMUST00000106591ENSMUST00000106592ENSMUST00000142460ENSMUST00000154123ENSMUSG00000081068ENSMUST00000121030ENSMUSG00000081813ENSMUST00000119384ENSMUSG00000082348ENSMUST00000121546ENSMUSG00000083904ENSMUST00000117305ENSMUSG00000084673ENSMUST00000122724
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000075624 ENSDART00000111314 N/A N/A N/A N/A N/A N/A 0.271±0.02 N/A N/A N/A 0.095±0.00 N/A N/A N/A
ENSDART00000133114 N/A N/A N/A 2.114±0.20 N/A N/A 0.149±0.03 0.563±0.25 0.154±0.00 N/A 0.185±0.00 N/A N/A N/A
ENSDARG00000096772 ENSDART00000153432 N/A N/A N/A 0.568±0.23 N/A N/A 0.271±0.08 0.408±0.30 N/A N/A 0.054±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162373 ENST00000371833 0.384±0.00 0.983±0.00 0.357±0.00 1.767±0.16 0.169±0.00 1.117±0.00 0.168±0.08 0.723±0.00 0.195±0.00 0.260±0.00 0.175±0.00 1.660±1.07 0.290±0.15 1.389±0.44
ENST00000463562 0.612±0.00 2.399±0.00 N/A 5.301±0.00 0.427±0.36 2.589±0.00 0.250±0.17 3.411±0.00 0.184±0.00 0.434±0.28 N/A 2.682±2.51 0.493±0.36 1.593±0.80
ENST00000476079 N/A 1.757±0.00 1.086±0.00 3.999±0.00 0.639±0.11 N/A N/A N/A 0.421±0.00 1.066±0.10 1.782±1.16 1.961±0.64 N/A 1.614±0.00
ENST00000476096 N/A 2.455±0.00 N/A N/A 0.422±0.00 0.176±0.00 N/A N/A N/A 1.367±0.00 0.650±0.00 N/A N/A N/A
ENST00000480399 0.826±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489956 N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000186094 ENST00000334103 N/A N/A N/A N/A N/A N/A N/A 1.012±0.00 N/A N/A N/A 0.031±0.00 0.414±0.00 N/A
ENST00000371836 N/A N/A N/A N/A N/A N/A 0.142±0.00 N/A N/A 0.193±0.01 N/A N/A N/A N/A
ENST00000371838 N/A N/A 0.588±0.00 1.073±0.00 N/A 0.098±0.07 N/A N/A 0.030±0.00 N/A N/A 0.182±0.14 N/A 0.195±0.00
ENST00000371839 0.037±0.00 N/A 0.436±0.00 1.908±0.90 0.195±0.00 N/A 0.046±0.00 0.333±0.00 0.046±0.00 0.216±0.00 N/A 0.059±0.06 0.223±0.06 0.433±0.06
ENST00000416121 0.025±0.00 0.148±0.00 0.117±0.00 N/A 0.058±0.00 N/A N/A 0.097±0.00 0.077±0.05 N/A 0.185±0.18 N/A N/A 0.194±0.00
ENST00000497451 N/A N/A N/A N/A 0.754±0.00 N/A 0.269±0.00 N/A N/A N/A N/A 0.254±0.00 N/A 0.332±0.00
ENSG00000215887 ENST00000502859 N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A 0.041±0.00 N/A 0.022±0.00
ENSG00000225623 ENST00000457061 N/A N/A N/A 0.292±0.20 N/A N/A N/A 0.133±0.00 N/A N/A N/A N/A N/A 0.556±0.54
ENSG00000229846 ENST00000456002 N/A N/A 0.279±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 0.025±0.00 0.215±0.02
ENSG00000230114 ENST00000420071 N/A N/A N/A 0.447±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00
ENSG00000233595 ENST00000438595 N/A 0.080±0.00 N/A 0.655±0.46 0.100±0.00 0.518±0.00 0.076±0.00 0.367±0.00 0.043±0.00 1.049±0.00 0.023±0.00 N/A N/A 0.148±0.00
ENSG00000237478 ENST00000428836 N/A N/A 3.847±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.219±0.00
ENSG00000279324 ENST00000622945 0.079±0.00 0.104±0.00 0.169±0.00 0.096±0.02 0.204±0.00 0.091±0.00 0.024±0.00 N/A 0.079±0.04 0.074±0.03 N/A 0.034±0.00 N/A 0.020±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028545 ENSMUST00000030274 0.742±0.62 5.501±0.81 2.708±0.09 6.801±3.36 2.045±1.56 1.039±0.13 0.614±0.28 5.038±0.59 0.110±0.06 0.719±0.28 0.270±0.12 3.797±1.66 7.774±3.05 1.208±0.43
ENSMUST00000123667 N/A N/A N/A N/A 0.318±0.00 N/A N/A N/A N/A N/A N/A 2.368±0.85 N/A N/A
ENSMUST00000129760 0.996±0.86 N/A 4.738±0.47 8.731±4.44 0.708±0.36 1.353±0.85 1.365±0.13 5.249±2.18 0.195±0.08 1.183±0.18 0.260±0.10 2.183±0.89 15.878±9.84 1.432±0.68
ENSMUST00000130523 1.823±0.15 8.974±3.63 N/A N/A 2.885±1.06 1.237±0.45 N/A N/A N/A 1.025±0.49 N/A 2.210±0.00 N/A N/A
ENSMUST00000138394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139876 N/A N/A N/A N/A N/A N/A N/A N/A 0.120±0.00 N/A 0.160±0.00 N/A N/A N/A
ENSMUSG00000061298 ENSMUST00000080744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.01 N/A 7.779±0.22
ENSMUST00000097920 N/A 0.082±0.01 N/A 0.441±0.01 0.020±0.00 N/A N/A 0.061±0.01 N/A 0.087±0.05 N/A 0.224±0.13 0.029±0.00 28.986±13.71
ENSMUST00000106587 N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 0.003±0.00 N/A N/A N/A N/A N/A
ENSMUST00000106589 N/A 0.142±0.00 N/A N/A N/A N/A N/A 0.076±0.00 N/A 0.228±0.11 N/A N/A 0.071±0.00 N/A
ENSMUST00000106591 N/A N/A 0.006±0.00 N/A N/A N/A 0.050±0.03 0.035±0.02 N/A 0.159±0.00 N/A 0.550±0.00 N/A N/A
ENSMUST00000106592 N/A 0.093±0.05 0.009±0.00 1.670±1.84 N/A N/A 0.038±0.00 N/A N/A 0.070±0.03 N/A 0.116±0.07 0.015±0.01 1.743±0.00
ENSMUST00000136433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142460 N/A 0.126±0.00 N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A 0.241±0.01 N/A N/A
ENSMUST00000148038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154123 N/A 0.095±0.00 0.022±0.01 N/A N/A N/A 0.066±0.00 N/A N/A 0.118±0.00 N/A 0.318±0.11 0.066±0.01 N/A
ENSMUSG00000081068 ENSMUST00000121030 N/A N/A 0.016±0.00 0.034±0.00 N/A N/A N/A N/A 0.045±0.00 N/A N/A 0.030±0.00 0.075±0.04 0.132±0.12
ENSMUSG00000081813 ENSMUST00000119384 N/A N/A N/A 0.163±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082348 ENSMUST00000121546 N/A N/A 0.008±0.00 0.081±0.02 N/A N/A N/A 0.056±0.00 N/A N/A N/A 0.296±0.08 0.008±0.00 0.090±0.05
ENSMUSG00000083904 ENSMUST00000117305 N/A N/A N/A 0.027±0.03 N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 0.063±0.02
ENSMUSG00000084673 ENSMUST00000122724 N/A N/A N/A 11.041±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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