C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00063G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045639-ENSDARG00000039412 CGP 7955 8:16523554-16778463
GeneTranscriptPositionBiotype
ENSDARG00000039412 (dmrta2)
doublesex and mab-3 related transcription factor like family A2 		ENSDART00000057590 (dmrta2-001) 16776620-16778463 protein_coding
ENSDARG00000045639 (elavl4)
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) 		ENSDART00000110171 (elavl4-001) 16544954-16632414 protein_coding
ENSDART00000134787 (elavl4-002) 16523554-16631801 protein_coding
ENSDART00000141173 (elavl4-004) 16523630-16573714 protein_coding
ENSDART00000144139 (elavl4-006) 16542870-16599193 processed_transcript
CIL_00063G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162374-ENSG00000142700 CGP 9606 1:50048014-50423500
GeneTranscriptPositionBiotype
ENSG00000142700 (DMRTA2)
DMRT-like family A2 		ENST00000404795 (DMRTA2-002) 50417550-50423500 protein_coding
ENST00000418121 (DMRTA2-001) 50417550-50421632 protein_coding
ENSG00000162374 (ELAVL4)
ELAV like neuron-specific RNA binding protein 4 		ENST00000357083 (ELAVL4-002) 50106292-50201399 protein_coding
ENST00000371819 (ELAVL4-006) 50109706-50202294 protein_coding
ENST00000371821 (ELAVL4-005) 50109626-50203054 protein_coding
ENST00000371823 (ELAVL4-004) 50108966-50201402 protein_coding
ENST00000371824 (ELAVL4-003) 50108933-50203786 protein_coding
ENST00000371827 (ELAVL4-001) 50103910-50203770 protein_coding
ENST00000448907 (ELAVL4-201) 50048014-50201868 protein_coding
ENST00000463650 (ELAVL4-010) 50105690-50145184 processed_transcript
ENST00000474675 (ELAVL4-009) 50177130-50197585 processed_transcript
ENST00000492299 (ELAVL4-008) 50144953-50181300 processed_transcript
ENST00000494555 (ELAVL4-007) 50109816-50145178 processed_transcript
ENSG00000225671 (FCF1P6)
FCF1 pseudogene 6 		ENST00000456841 (FCF1P6-001) 50405430-50406024 processed_pseudogene
ENSG00000229316 (HMGB1P45)
high mobility group box 1 pseudogene 45 		ENST00000435986 (HMGB1P45-001) 50398825-50399773 processed_pseudogene
ENSG00000230828 (RP11-492I2.1)
 ENST00000456070 (RP11-492I2.1-001) 50114937-50115282 processed_pseudogene
ENSG00000233407 (RP11-567C20.3)
 ENST00000440897 (RP11-567C20.3-001) 50206084-50223127 antisense
ENSG00000234080 (RP11-183G22.1)
 ENST00000423464 (RP11-183G22.1-001) 50326131-50327007 processed_pseudogene
ENSG00000237337 (RP11-567C20.2)
 ENST00000442477 (RP11-567C20.2-001) 50174306-50175868 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063G_0001ENSDARG00000039412ENSDART00000057590ENSDARG00000045639ENSDART00000110171ENSDART00000134787ENSDART00000141173ENSDART00000144139CIL_00063G_0002ENSG00000142700ENST00000404795ENST00000418121ENSG00000162374ENST00000357083ENST00000371819ENST00000371821ENST00000371823ENST00000371824ENST00000371827ENST00000448907ENST00000463650ENST00000474675ENST00000492299ENST00000494555ENSG00000225671ENST00000456841ENSG00000229316ENST00000435986ENSG00000230828ENST00000456070ENSG00000233407ENST00000440897ENSG00000234080ENST00000423464ENSG00000237337ENST00000442477
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063G_0001ENSDARG00000039412ENSDART00000057590ENSDARG00000045639ENSDART00000110171ENSDART00000134787ENSDART00000144139CIL_00063G_0002ENSG00000142700ENST00000404795ENST00000418121ENSG00000162374ENST00000357083ENST00000371819ENST00000371821ENST00000371824ENST00000371827ENST00000448907ENST00000474675ENST00000492299ENSG00000225671ENST00000456841ENSG00000229316ENST00000435986ENSG00000230828ENST00000456070ENSG00000233407ENST00000440897ENSG00000234080ENST00000423464ENSG00000237337ENST00000442477
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039412 ENSDART00000057590 N/A N/A N/A 3.409±0.00 N/A N/A 0.175±0.00 0.106±0.00 N/A N/A 0.140±0.00 N/A N/A N/A
ENSDARG00000045639 ENSDART00000110171 N/A N/A N/A 46.920±0.00 N/A N/A 0.450±0.22 0.338±0.09 0.055±0.00 N/A N/A N/A N/A N/A
ENSDART00000134787 N/A N/A N/A 49.097±0.00 N/A N/A 0.093±0.00 0.108±0.00 N/A N/A 2.127±0.00 N/A N/A N/A
ENSDART00000141173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144139 N/A N/A N/A N/A N/A N/A 0.710±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142700 ENST00000404795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A 1.289±0.00
ENST00000418121 N/A N/A N/A 0.129±0.04 0.010±0.00 N/A N/A N/A N/A 0.069±0.00 0.009±0.00 0.077±0.03 N/A 0.557±0.00
ENSG00000162374 ENST00000357083 N/A N/A N/A 5.581±0.00 N/A 0.389±0.00 0.029±0.00 0.041±0.00 N/A N/A N/A N/A 0.065±0.00 1.381±0.56
ENST00000371819 N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A 0.006±0.00 0.026±0.00 N/A
ENST00000371821 N/A N/A N/A 2.217±0.00 0.186±0.00 0.660±0.00 N/A N/A N/A N/A N/A N/A 0.015±0.00 N/A
ENST00000371823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371824 N/A N/A 0.067±0.00 2.906±1.53 N/A 0.393±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371827 N/A 0.012±0.00 N/A 6.678±2.03 0.047±0.00 0.368±0.24 N/A N/A 0.017±0.00 N/A N/A 0.020±0.01 0.042±0.00 0.311±0.04
ENST00000448907 N/A 0.058±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474675 0.058±0.00 N/A N/A N/A 0.215±0.00 N/A N/A 0.502±0.00 N/A N/A N/A N/A N/A N/A
ENST00000492299 0.025±0.00 N/A N/A N/A N/A N/A 0.029±0.02 0.010±0.00 N/A N/A N/A 0.013±0.00 0.029±0.00 1.126±0.06
ENST00000494555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225671 ENST00000456841 N/A 0.018±0.00 N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A 0.133±0.00
ENSG00000229316 ENST00000435986 N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A 0.351±0.00 N/A N/A N/A 0.087±0.00
ENSG00000230828 ENST00000456070 N/A 0.043±0.00 N/A 0.187±0.00 N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A
ENSG00000233407 ENST00000440897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.04
ENSG00000234080 ENST00000423464 0.108±0.00 0.116±0.00 N/A N/A 0.032±0.00 0.144±0.00 N/A 0.124±0.00 0.133±0.00 0.030±0.00 0.201±0.00 N/A N/A 0.205±0.07
ENSG00000237337 ENST00000442477 0.066±0.00 N/A N/A 0.108±0.00 N/A 0.025±0.00 0.185±0.00 0.152±0.00 0.144±0.00 N/A N/A N/A N/A N/A

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