C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00063W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000071086-ENSDARG00000071084 CGP 7955 6:10669128-10720493
GeneTranscriptPositionBiotype
ENSDARG00000006639 (lnpb)
limb and neural patterns b 		ENSDART00000014521 (lnpb-201) 10713261-10774579 protein_coding
ENSDART00000133893 (lnpb-001) 10749587-10774598 protein_coding
ENSDART00000135454 (lnpb-002) 10766607-10774529 protein_coding
ENSDARG00000071084 (wipf1)
WAS/WASL interacting protein family, member 1 		ENSDART00000104884 (wipf1-201) 10692096-10702827 protein_coding
ENSDART00000151661 (wipf1-001) 10692093-10720493 protein_coding
ENSDARG00000071086 (gpr155b)
G protein-coupled receptor 155b 		ENSDART00000104885 (gpr155b-201) 10669364-10687163 protein_coding
ENSDART00000151714 (gpr155b-001) 10669128-10691645 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00063W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000090804-ENSDARG00000038458 CGP 7955 9:2480994-2537534
GeneTranscriptPositionBiotype
ENSDARG00000038458 (WIPF1 (1 of 2))
WAS/WASL interacting protein family, member 1 		ENSDART00000056123 (WIPF1 (1 of 2)-201) 2518414-2537534 protein_coding
ENSDART00000139207 (WIPF1 (1 of 2)-001) 2518413-2529246 protein_coding
ENSDARG00000090804 (gpr155a)
G protein-coupled receptor 155a 		ENSDART00000126719 (gpr155a-201) 2480994-2510281 protein_coding
ENSDART00000147034 (gpr155a-001) 2481395-2513969 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00063W_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163328-ENSG00000115935 CGP 9606 2:174431571-174682916
GeneTranscriptPositionBiotype
ENSG00000115935 (WIPF1)
WAS/WASL interacting protein family, member 1 		ENST00000272746 (WIPF1-004) 174560770-174682899 protein_coding
ENST00000359761 (WIPF1-006) 174562204-174682883 protein_coding
ENST00000392546 (WIPF1-002) 174562211-174598206 protein_coding
ENST00000392547 (WIPF1-001) 174559572-174634579 protein_coding
ENST00000409415 (WIPF1-003) 174571169-174682871 protein_coding
ENST00000409891 (WIPF1-005) 174566161-174597765 protein_coding
ENST00000410117 (WIPF1-016) 174574730-174597769 protein_coding
ENST00000436221 (WIPF1-014) 174575263-174598211 protein_coding
ENST00000455428 (WIPF1-017) 174572324-174585589 protein_coding
ENST00000467149 (WIPF1-019) 174567077-174570646 processed_transcript
ENST00000469002 (WIPF1-018) 174673267-174682847 processed_transcript
ENST00000470752 (WIPF1-010) 174623481-174634605 processed_transcript
ENST00000474332 (WIPF1-013) 174625624-174630429 retained_intron
ENST00000480400 (WIPF1-015) 174581140-174597804 retained_intron
ENST00000487291 (WIPF1-009) 174676337-174682916 processed_transcript
ENST00000488830 (WIPF1-012) 174625710-174634536 retained_intron
ENST00000490887 (WIPF1-011) 174625857-174634579 processed_transcript
ENST00000610916 (WIPF1-201) 174566161-174597765 protein_coding
ENSG00000163328 (GPR155)
G protein-coupled receptor 155 		ENST00000295500 (GPR155-002) 174435144-174487037 protein_coding
ENST00000392551 (GPR155-003) 174434152-174487094 protein_coding
ENST00000392552 (GPR155-001) 174432238-174487080 protein_coding
ENST00000459996 (GPR155-005) 174436306-174445422 processed_transcript
ENST00000497620 (GPR155-004) 174482873-174487000 processed_transcript
ENST00000614352 (GPR155-201) 174431571-174487088 protein_coding
ENSG00000179997 (AC010894.4)
 ENST00000313760 (AC010894.4-001) 174501952-174502312 processed_pseudogene
ENSG00000226853 (AC010894.3)
 ENST00000417038 (AC010894.3-001) 174487403-174488300 lincRNA
ENST00000444196 (AC010894.3-002) 174487389-174488156 lincRNA
ENST00000606406 (AC010894.3-003) 174487512-174488386 lincRNA
ENSG00000236449 (AC018890.6)
 ENST00000412835 (AC018890.6-001) 174547374-174665689 antisense
ENST00000442996 (AC018890.6-002) 174547141-174774827 antisense
ENSG00000279884 (RP11-483E17.1)
 ENST00000624428 (RP11-483E17.1-001) 174545385-174546335 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_00063W_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041762-ENSMUSG00000075284 CGP 10090 2:73341506-73529734
GeneTranscriptPositionBiotype
ENSMUSG00000041762 (Gpr155)
G protein-coupled receptor 155 		ENSMUST00000048504 (Gpr155-002) 73350892-73386398 processed_transcript
ENSMUST00000076463 (Gpr155-001) 73341506-73386572 protein_coding
ENSMUST00000112043 (Gpr155-004) 73342990-73386443 protein_coding
ENSMUST00000112044 (Gpr155-005) 73341958-73386412 protein_coding
ENSMUST00000129184 (Gpr155-006) 73362420-73370129 processed_transcript
ENSMUST00000131430 (Gpr155-007) 73347647-73362511 protein_coding
ENSMUST00000134595 (Gpr155-003) 73381406-73386411 retained_intron
ENSMUST00000184503 (Gpr155-008) 73350892-73386398 retained_intron
ENSMUSG00000075284 (Wipf1)
WAS/WASL interacting protein family, member 1 		ENSMUST00000094681 (Wipf1-001) 73429610-73529734 protein_coding
ENSMUST00000102679 (Wipf1-003) 73432147-73453979 protein_coding
ENSMUST00000102680 (Wipf1-002) 73430039-73485763 protein_coding
ENSMUST00000129594 (Wipf1-005) 73447932-73529382 processed_transcript
ENSMUST00000141264 (Wipf1-006) 73437464-73486469 protein_coding
ENSMUST00000143061 (Wipf1-004) 73444512-73529479 processed_transcript
ENSMUST00000151939 (Wipf1-007) 73444452-73452710 protein_coding
ENSMUSG00000085768 (Gm13707)
predicted gene 13707 		ENSMUST00000123663 (Gm13707-001) 73421909-73429142 antisense
ENSMUSG00000086069 (Gm13708)
predicted gene 13708 		ENSMUST00000145170 (Gm13708-001) 73459705-73477602 lincRNA
ENSMUSG00000086546 (Gm13709)
predicted gene 13709 		ENSMUST00000138573 (Gm13709-001) 73370909-73379297 antisense
ENSMUSG00000087176 (D230022J07Rik)
RIKEN cDNA D230022J07 gene 		ENSMUST00000144735 (D230022J07Rik-001) 73386970-73420498 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063W_0001ENSDARG00000006639ENSDART00000014521ENSDART00000133893ENSDART00000135454ENSDARG00000071084ENSDART00000104884ENSDART00000151661ENSDARG00000071086ENSDART00000104885ENSDART00000151714CIL_00063W_0002ENSDARG00000038458ENSDART00000056123ENSDART00000139207ENSDARG00000090804ENSDART00000126719ENSDART00000147034CIL_00063W_0003ENSG00000115935ENST00000272746ENST00000359761ENST00000392546ENST00000392547ENST00000409415ENST00000409891ENST00000410117ENST00000436221ENST00000455428ENST00000467149ENST00000469002ENST00000470752ENST00000474332ENST00000480400ENST00000487291ENST00000488830ENST00000490887ENST00000610916ENSG00000163328ENST00000295500ENST00000392551ENST00000392552ENST00000459996ENST00000497620ENST00000614352ENSG00000179997ENST00000313760ENSG00000226853ENST00000417038ENST00000444196ENST00000606406ENSG00000236449ENST00000412835ENST00000442996ENSG00000279884ENST00000624428CIL_00063W_0004ENSMUSG00000041762ENSMUST00000048504ENSMUST00000076463ENSMUST00000112043ENSMUST00000112044ENSMUST00000129184ENSMUST00000131430ENSMUST00000134595ENSMUST00000184503ENSMUSG00000075284ENSMUST00000094681ENSMUST00000102679ENSMUST00000102680ENSMUST00000129594ENSMUST00000141264ENSMUST00000143061ENSMUST00000151939ENSMUSG00000085768ENSMUST00000123663ENSMUSG00000086069ENSMUST00000145170ENSMUSG00000086546ENSMUST00000138573ENSMUSG00000087176ENSMUST00000144735
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063W_0001ENSDARG00000006639ENSDART00000014521ENSDART00000133893ENSDART00000135454ENSDARG00000071084ENSDART00000104884ENSDART00000151661ENSDARG00000071086ENSDART00000104885ENSDART00000151714CIL_00063W_0002ENSDARG00000038458ENSDART00000056123ENSDART00000139207ENSDARG00000090804ENSDART00000126719ENSDART00000147034CIL_00063W_0003ENSG00000115935ENST00000272746ENST00000359761ENST00000392547ENST00000409415ENSG00000163328ENST00000295500ENST00000392551ENST00000392552ENST00000614352ENSG00000179997ENST00000313760ENSG00000226853ENST00000417038ENST00000444196ENST00000606406ENSG00000236449ENST00000412835ENST00000442996ENSG00000279884ENST00000624428CIL_00063W_0004ENSMUSG00000041762ENSMUST00000048504ENSMUST00000076463ENSMUST00000112043ENSMUST00000112044ENSMUST00000131430ENSMUSG00000075284ENSMUST00000094681ENSMUST00000102679ENSMUST00000102680ENSMUSG00000085768ENSMUST00000123663ENSMUSG00000086069ENSMUST00000145170ENSMUSG00000086546ENSMUST00000138573ENSMUSG00000087176ENSMUST00000144735
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006639 ENSDART00000014521 N/A N/A N/A 4.435±0.00 N/A N/A N/A N/A 0.067±0.00 N/A 1.656±0.00 N/A N/A N/A
ENSDART00000133893 N/A N/A N/A 8.930±1.02 N/A N/A 5.154±1.86 2.772±1.44 N/A N/A 4.332±0.00 N/A N/A N/A
ENSDART00000135454 N/A N/A N/A N/A N/A N/A N/A 1.146±0.00 0.112±0.00 N/A N/A N/A N/A N/A
ENSDARG00000071084 ENSDART00000104884 N/A N/A N/A 0.955±0.50 N/A N/A 2.580±1.77 4.858±2.33 N/A N/A 1.370±0.00 N/A N/A N/A
ENSDART00000151661 N/A N/A N/A 1.439±0.23 N/A N/A 3.584±2.14 7.746±4.35 N/A N/A 0.887±0.00 N/A N/A N/A
ENSDARG00000071086 ENSDART00000104885 N/A N/A N/A 5.226±0.00 N/A N/A 0.961±0.42 N/A 0.042±0.00 N/A N/A N/A N/A N/A
ENSDART00000151714 N/A N/A N/A 6.350±0.00 N/A N/A 1.006±0.61 0.133±0.02 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000038458 ENSDART00000056123 N/A N/A N/A 1.087±0.22 N/A N/A 4.550±3.02 3.402±0.00 N/A N/A 1.986±0.00 N/A N/A N/A
ENSDART00000139207 N/A N/A N/A 0.919±0.09 N/A N/A 2.815±1.38 30.854±4.38 0.157±0.00 N/A 1.669±0.00 N/A N/A N/A
ENSDARG00000090804 ENSDART00000126719 N/A N/A N/A N/A N/A N/A 0.513±0.00 N/A 0.429±0.00 N/A N/A N/A N/A N/A
ENSDART00000147034 N/A N/A N/A 0.891±0.00 N/A N/A 2.132±0.00 N/A 1.973±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115935 ENST00000272746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.850±0.00 1.139±0.00 2.922±0.00 N/A
ENST00000359761 N/A N/A N/A N/A N/A N/A 0.536±0.00 N/A N/A 31.243±0.00 N/A N/A N/A N/A
ENST00000392546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392547 16.595±0.00 18.312±0.00 N/A 6.561±5.84 9.064±0.00 17.311±0.00 0.301±0.00 3.755±2.99 1.987±0.86 3.820±0.00 1.729±0.00 2.973±2.73 6.188±0.27 5.010±3.70
ENST00000409415 N/A N/A 1.394±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000410117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163328 ENST00000295500 N/A N/A 0.634±0.00 N/A N/A N/A N/A 0.822±0.00 N/A 0.800±0.00 N/A 0.677±0.30 0.481±0.00 N/A
ENST00000392551 N/A N/A N/A N/A N/A N/A 0.580±0.12 N/A N/A N/A 0.380±0.00 0.436±0.00 N/A N/A
ENST00000392552 0.953±0.00 0.864±0.00 1.734±0.00 4.412±0.94 0.495±0.00 1.353±0.90 1.559±0.94 1.759±0.00 0.902±0.58 0.726±0.49 0.413±0.26 0.925±0.69 0.794±0.15 1.174±0.00
ENST00000459996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614352 N/A N/A N/A N/A N/A N/A N/A N/A 0.116±0.00 N/A N/A 0.612±0.00 N/A N/A
ENSG00000179997 ENST00000313760 0.036±0.00 0.257±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226853 ENST00000417038 0.642±0.00 1.052±0.00 N/A 1.795±0.00 0.215±0.00 0.274±0.00 1.059±0.00 0.750±0.52 0.977±0.00 0.143±0.00 0.161±0.00 0.647±0.13 0.453±0.14 9.706±0.23
ENST00000444196 N/A 0.224±0.00 N/A 0.184±0.00 N/A N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A 1.098±0.00
ENST00000606406 N/A N/A N/A 0.180±0.00 0.776±0.00 N/A 0.281±0.00 N/A 0.872±0.00 0.096±0.00 N/A 0.153±0.03 0.200±0.02 1.653±0.00
ENSG00000236449 ENST00000412835 0.029±0.00 N/A 0.898±0.00 0.156±0.00 0.080±0.00 N/A 0.302±0.28 0.201±0.00 0.075±0.00 N/A 0.036±0.00 0.072±0.03 0.184±0.00 0.055±0.00
ENST00000442996 N/A N/A N/A 0.148±0.00 N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A 0.400±0.11 0.021±0.02
ENSG00000279884 ENST00000624428 0.036±0.00 0.614±0.00 N/A N/A N/A 0.074±0.00 0.160±0.00 N/A N/A N/A N/A 0.055±0.00 0.047±0.01 0.133±0.10
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041762 ENSMUST00000048504 1.066±0.00 N/A N/A N/A 1.458±0.00 N/A 0.689±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000076463 1.758±0.43 0.603±0.16 1.830±0.05 2.120±0.40 2.074±0.56 0.395±0.12 1.752±0.26 1.449±0.23 2.917±1.42 5.263±0.55 2.724±0.39 1.728±0.59 1.787±1.52 0.167±0.15
ENSMUST00000112043 N/A N/A N/A 1.445±0.00 0.920±0.00 N/A N/A N/A N/A N/A 0.863±0.00 1.842±0.00 0.298±0.00 N/A
ENSMUST00000112044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.071±0.00
ENSMUST00000129184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131430 3.037±0.00 1.688±0.18 N/A 33.246±0.00 4.104±0.00 0.768±0.14 3.129±0.40 2.901±0.69 5.554±0.34 5.709±0.12 N/A 5.165±3.94 2.199±1.52 1.072±0.65
ENSMUST00000134595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000075284 ENSMUST00000094681 1.016±0.46 0.960±0.33 3.787±0.54 0.632±0.07 1.731±0.45 0.884±0.18 0.837±0.52 0.917±0.40 0.603±0.27 1.671±0.15 1.361±0.61 0.719±0.28 2.470±1.61 0.114±0.05
ENSMUST00000102679 1.109±0.00 2.343±0.27 N/A N/A 6.499±2.93 1.887±0.92 0.475±0.00 0.648±0.15 0.219±0.09 2.342±0.60 N/A 1.390±0.50 5.769±0.00 N/A
ENSMUST00000102680 1.510±0.84 1.229±0.75 N/A 0.612±0.41 5.612±2.64 1.696±0.20 0.548±0.08 0.914±0.39 0.467±0.20 4.301±0.31 0.488±0.00 1.324±0.82 3.973±2.74 0.120±0.04
ENSMUST00000129594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085768 ENSMUST00000123663 0.190±0.03 0.354±0.21 0.185±0.06 0.072±0.00 0.439±0.16 0.322±0.12 0.266±0.11 0.156±0.07 0.115±0.06 0.327±0.03 0.181±0.09 0.437±0.19 0.122±0.01 0.207±0.09
ENSMUSG00000086069 ENSMUST00000145170 0.169±0.02 N/A N/A 0.035±0.00 0.726±0.11 N/A 0.137±0.00 N/A 0.167±0.05 N/A N/A N/A N/A 0.399±0.25
ENSMUSG00000086546 ENSMUST00000138573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.913±0.31
ENSMUSG00000087176 ENSMUST00000144735 0.111±0.05 0.194±0.07 0.149±0.00 0.049±0.02 0.228±0.13 0.155±0.04 0.053±0.02 0.064±0.03 0.050±0.05 0.129±0.05 0.265±0.11 0.182±0.07 0.050±0.02 0.078±0.04

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