C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000645_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146733-ENSG00000146731 CGP 9606 7:56011051-56063989
GeneTranscriptPositionBiotype
ENSG00000146731 (CCT6A)
chaperonin containing TCP1, subunit 6A (zeta 1) 		ENST00000275603 (CCT6A-001) 56051630-56063989 protein_coding
ENST00000335503 (CCT6A-003) 56051685-56063989 protein_coding
ENST00000462133 (CCT6A-007) 56060611-56063299 processed_transcript
ENST00000466479 (CCT6A-009) 56062619-56063620 retained_intron
ENST00000466572 (CCT6A-006) 56059865-56060940 retained_intron
ENST00000482776 (CCT6A-010) 56056312-56059010 retained_intron
ENST00000492618 (CCT6A-005) 56059544-56062059 retained_intron
ENST00000493855 (CCT6A-004) 56054476-56055856 retained_intron
ENST00000494736 (CCT6A-008) 56061678-56063178 retained_intron
ENSG00000146733 (PSPH)
phosphoserine phosphatase 		ENST00000275605 (PSPH-001) 56011067-56051604 protein_coding
ENST00000395471 (PSPH-002) 56011068-56051604 protein_coding
ENST00000413218 (PSPH-004) 56021206-56051392 protein_coding
ENST00000416592 (PSPH-006) 56021206-56051467 protein_coding
ENST00000419984 (PSPH-007) 56021073-56051288 protein_coding
ENST00000421312 (PSPH-003) 56021073-56051467 protein_coding
ENST00000421626 (PSPH-009) 56015031-56034156 protein_coding
ENST00000424596 (PSPH-010) 56021181-56051446 protein_coding
ENST00000427797 (PSPH-011) 56017277-56034172 nonsense_mediated_decay
ENST00000437355 (PSPH-012) 56011051-56051448 nonsense_mediated_decay
ENST00000459834 (PSPH-008) 56011538-56034171 processed_transcript
ENST00000472276 (PSPH-005) 56033134-56034171 retained_intron
ENSG00000206603 (SNORA22)
Small nucleolar RNA SNORA22 		ENST00000383876 (SNORA22.1-202) 56055365-56055502 snoRNA
CIL_000645_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029446-ENSMUSG00000029447 CGP 10090 5:129765558-129845820
GeneTranscriptPositionBiotype
ENSMUSG00000029446 (Psph)
phosphoserine phosphatase 		ENSMUST00000031399 (Psph-001) 129765558-129787204 protein_coding
ENSMUST00000118268 (Psph-004) 129765558-129771615 protein_coding
ENSMUST00000136280 (Psph-003) 129769243-129771155 processed_transcript
ENSMUST00000136507 (Psph-002) 129770700-129786975 protein_coding
ENSMUST00000178244 (Psph-005) 129776866-129787252 retained_intron
ENSMUSG00000029447 (Cct6a)
chaperonin containing Tcp1, subunit 6a (zeta) 		ENSMUST00000031402 (Cct6a-201) 129787439-129845820 protein_coding
ENSMUSG00000065304 (Gm23245)
predicted gene, 23245 		ENSMUST00000083370 (Gm23245-201) 129789539-129789673 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000645_0001ENSG00000146731ENST00000275603ENST00000335503ENST00000462133ENST00000466479ENST00000466572ENST00000482776ENST00000492618ENST00000493855ENST00000494736ENSG00000146733ENST00000275605ENST00000395471ENST00000413218ENST00000416592ENST00000419984ENST00000421312ENST00000421626ENST00000424596ENST00000427797ENST00000437355ENST00000459834ENST00000472276ENSG00000206603ENST00000383876CIL_000645_0002ENSMUSG00000029446ENSMUST00000031399ENSMUST00000118268ENSMUST00000136280ENSMUST00000136507ENSMUST00000178244ENSMUSG00000029447ENSMUST00000031402ENSMUSG00000065304ENSMUST00000083370
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000645_0001ENSG00000146731ENST00000275603ENST00000335503ENST00000462133ENST00000482776ENST00000492618ENSG00000146733ENST00000275605ENST00000395471ENST00000416592ENST00000419984ENST00000421626ENST00000424596ENST00000437355ENST00000459834ENST00000472276ENSG00000206603ENST00000383876CIL_000645_0002ENSMUSG00000029446ENSMUST00000031399ENSMUST00000136280ENSMUST00000136507ENSMUST00000178244ENSMUSG00000029447ENSMUST00000031402ENSMUSG00000065304ENSMUST00000083370
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000146731 ENST00000275603 40.535±0.00 19.928±0.00 1.259±0.00 24.723±15.64 16.218±6.49 21.089±12.98 10.727±7.69 20.987±15.71 9.423±4.59 12.758±5.87 17.362±13.88 30.758±9.62 34.891±8.07 36.615±14.90
ENST00000335503 N/A 9.170±0.00 N/A N/A 6.894±0.00 16.820±0.00 N/A 11.167±0.00 3.832±0.00 N/A 8.551±0.00 N/A N/A 25.834±0.00
ENST00000462133 N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.629±0.00 N/A N/A N/A N/A
ENST00000466479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.319±0.00 N/A N/A N/A
ENST00000492618 N/A N/A N/A N/A N/A N/A 2.850±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000493855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000146733 ENST00000275605 N/A 0.785±0.00 1.162±0.00 2.339±0.00 0.673±0.01 1.141±0.00 N/A 0.589±0.00 0.685±0.00 0.335±0.00 0.683±0.00 3.154±0.00 0.653±0.00 2.978±0.00
ENST00000395471 0.745±0.00 N/A N/A 0.348±0.00 1.720±0.00 N/A 0.525±0.07 1.274±0.00 N/A 0.626±0.00 N/A 2.783±0.16 1.709±0.47 2.826±0.00
ENST00000413218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.784±0.00 6.086±0.00
ENST00000419984 N/A N/A N/A N/A N/A N/A 0.637±0.00 N/A N/A N/A N/A N/A 1.702±0.00 N/A
ENST00000421312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421626 0.619±0.00 N/A N/A N/A N/A N/A N/A 1.338±0.00 N/A N/A N/A N/A N/A N/A
ENST00000424596 1.398±0.00 N/A N/A N/A N/A 1.327±0.00 3.556±0.00 N/A N/A 2.493±0.00 N/A N/A N/A N/A
ENST00000427797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437355 N/A N/A N/A 1.251±0.00 N/A N/A N/A 1.302±0.37 N/A 0.748±0.00 2.894±0.81 12.571±3.33 0.872±0.00 4.198±3.13
ENST00000459834 N/A N/A N/A 1.871±1.01 2.339±0.00 N/A N/A N/A N/A N/A 1.418±0.00 5.330±0.00 N/A 7.337±0.00
ENST00000472276 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.850±0.00 N/A N/A N/A N/A
ENSG00000206603 ENST00000383876 0.134±0.00 N/A N/A 0.417±0.00 N/A N/A 13.136±0.00 N/A 0.570±0.00 N/A N/A 14.332±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029446 ENSMUST00000031399 14.323±4.06 9.131±1.32 5.232±0.94 7.793±2.08 12.502±2.81 3.558±0.83 2.257±0.50 9.408±1.07 13.545±11.16 4.856±0.67 4.180±0.25 5.683±1.23 21.642±15.50 8.887±0.71
ENSMUST00000118268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136280 N/A N/A N/A N/A N/A N/A N/A 8.844±1.40 N/A N/A N/A N/A N/A N/A
ENSMUST00000136507 N/A 11.408±1.99 N/A N/A N/A N/A 1.835±0.25 N/A N/A N/A 3.303±0.77 4.593±0.96 N/A N/A
ENSMUST00000178244 1.012±0.01 1.498±0.18 0.598±0.13 0.561±0.01 1.212±0.40 N/A 0.243±0.05 0.632±0.00 0.397±0.11 0.625±0.09 0.359±0.05 1.080±0.21 N/A 0.744±0.11
ENSMUSG00000029447 ENSMUST00000031402 31.977±9.47 14.605±2.95 34.000±0.00 52.576±21.20 18.878±3.80 16.311±2.18 14.561±2.72 24.244±8.06 21.901±11.25 14.414±2.92 30.094±3.15 34.133±26.52 106.001±55.66 28.081±12.33
ENSMUSG00000065304 ENSMUST00000083370 N/A N/A 29.421±0.00 6.571±0.00 755.734±0.00 N/A N/A N/A 17.606±14.53 N/A N/A 38.425±4.14 11.946±6.13 N/A

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