C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00064N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074812-ENSDARG00000070055 CGP 7955 1:24256266-24343971
GeneTranscriptPositionBiotype
ENSDARG00000070055 (arfip1)
ADP-ribosylation factor interacting protein 1 (arfaptin 1) 		ENSDART00000102501 (arfip1-001) 24300099-24343971 protein_coding
ENSDART00000125686 (arfip1-201) 24298452-24337038 protein_coding
ENSDART00000131628 (arfip1-004) 24336167-24343819 retained_intron
ENSDART00000134200 (arfip1-003) 24303910-24343871 protein_coding
ENSDART00000141892 (arfip1-002) 24300116-24343927 protein_coding
ENSDARG00000074812 (fhdc1)
formin homology domain containing 1 		ENSDART00000111686 (fhdc1-201) 24256266-24277420 protein_coding
ENSDART00000134470 (fhdc1-001) 24256914-24296137 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00064N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041842-ENSMUSG00000074513 CGP 10090 3:84444035-85887516
GeneTranscriptPositionBiotype
ENSMUSG00000028085 (Pet112)
glutamyl-tRNA(Gln) amidotransferase, subunit B 		ENSMUST00000029726 (Pet112-002) 85574195-85654158 processed_transcript
ENSMUST00000107672 (Pet112-003) 85574119-85646579 protein_coding
ENSMUST00000107674 (Pet112-004) 85574127-85652833 protein_coding
ENSMUST00000127348 (Pet112-001) 85574119-85655622 protein_coding
ENSMUST00000134273 (Pet112-005) 85574132-85576041 processed_transcript
ENSMUSG00000028086 (Fbxw7)
F-box and WD-40 domain protein 7 		ENSMUST00000029727 (Fbxw7-002) 84952146-84977645 protein_coding
ENSMUST00000107675 (Fbxw7-005) 84925480-84979197 protein_coding
ENSMUST00000107678 (Fbxw7-003) 84864145-84979198 protein_coding
ENSMUST00000107679 (Fbxw7-001) 84815268-84979198 protein_coding
ENSMUST00000151410 (Fbxw7-004) 84815478-84977682 retained_intron
ENSMUSG00000031286 (Glt28d2)
glycosyltransferase 28 domain containing 2 		ENSMUST00000033643 (Glt28d2-001) 85869849-85887516 protein_coding
ENSMUST00000125216 (Glt28d2-002) 85801047-85887518 processed_transcript
ENSMUSG00000041842 (Fhdc1)
FH2 domain containing 1 		ENSMUST00000091002 (Fhdc1-001) 84444035-84479491 protein_coding
ENSMUST00000107689 (Fhdc1-002) 84444038-84480429 protein_coding
ENSMUST00000125643 (Fhdc1-004) 84448809-84453763 retained_intron
ENSMUST00000131065 (Fhdc1-003) 84474523-84478982 processed_transcript
ENSMUSG00000047819 (Tigd4)
tigger transposable element derived 4 		ENSMUST00000062623 (Tigd4-201) 84593574-84597032 protein_coding
ENSMUSG00000051000 (Fam160a1)
family with sequence similarity 160, member A1 		ENSMUST00000094148 (Fam160a1-201) 85660065-85741389 protein_coding
ENSMUST00000118408 (Fam160a1-001) 85660063-85746266 protein_coding
ENSMUST00000119077 (Fam160a1-002) 85660063-85722474 protein_coding
ENSMUST00000126445 (Fam160a1-003) 85660061-85673988 retained_intron
ENSMUSG00000056498 (Tmem154)
transmembrane protein 154 		ENSMUST00000107682 (Tmem154-001) 84666192-84704575 protein_coding
ENSMUST00000128344 (Tmem154-004) 84690223-84692544 retained_intron
ENSMUST00000129417 (Tmem154-003) 84666370-84685555 processed_transcript
ENSMUST00000134890 (Tmem154-002) 84666210-84685665 retained_intron
ENSMUSG00000074513 (Arfip1)
ADP-ribosylation factor interacting protein 1 		ENSMUST00000098990 (Arfip1-001) 84496093-84582534 protein_coding
ENSMUST00000107687 (Arfip1-002) 84497204-84582485 protein_coding
ENSMUST00000143514 (Arfip1-003) 84497736-84582625 protein_coding
ENSMUST00000146862 (Arfip1-005) 85817123-85887368 retained_intron
ENSMUST00000154148 (Arfip1-004) 84496426-85887516 protein_coding
ENSMUSG00000080424 (Mir466k)
microRNA 466k 		ENSMUST00000116774 (Mir466k-201) 85467377-85467498 miRNA
ENSMUSG00000085527 (Gm15535)
predicted gene 15535 		ENSMUST00000128872 (Gm15535-002) 85558180-85573854 processed_transcript
ENSMUST00000148478 (Gm15535-001) 85556046-85573945 processed_transcript
ENSMUSG00000085625 (Gm8813)
predicted gene 8813 		ENSMUST00000155930 (Gm8813-001) 84552858-84553452 processed_pseudogene
ENSMUSG00000099995 (RP23-94M23.1)
RIKEN cDNA 1700036G14 gene 		ENSMUST00000189046 (RP23-94M23.1-001) 85317519-85332030 lincRNA
ENSMUSG00000100840 (RP23-94M23.2)
 ENSMUST00000185907 (RP23-94M23.2-001) 85360228-85361174 lincRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00064N_0001ENSDARG00000070055ENSDART00000102501ENSDART00000125686ENSDART00000131628ENSDART00000134200ENSDART00000141892ENSDARG00000074812ENSDART00000111686ENSDART00000134470CIL_00064N_0002ENSMUSG00000028085ENSMUST00000029726ENSMUST00000107672ENSMUST00000107674ENSMUST00000127348ENSMUST00000134273ENSMUSG00000028086ENSMUST00000029727ENSMUST00000107675ENSMUST00000107678ENSMUST00000107679ENSMUST00000151410ENSMUSG00000031286ENSMUST00000033643ENSMUST00000125216ENSMUSG00000041842ENSMUST00000091002ENSMUST00000107689ENSMUST00000125643ENSMUST00000131065ENSMUSG00000047819ENSMUST00000062623ENSMUSG00000051000ENSMUST00000094148ENSMUST00000118408ENSMUST00000119077ENSMUST00000126445ENSMUSG00000056498ENSMUST00000107682ENSMUST00000128344ENSMUST00000129417ENSMUST00000134890ENSMUSG00000074513ENSMUST00000098990ENSMUST00000107687ENSMUST00000143514ENSMUST00000146862ENSMUST00000154148ENSMUSG00000080424ENSMUST00000116774ENSMUSG00000085527ENSMUST00000128872ENSMUST00000148478ENSMUSG00000085625ENSMUST00000155930ENSMUSG00000099995ENSMUST00000189046ENSMUSG00000100840ENSMUST00000185907
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00064N_0001ENSDARG00000070055ENSDART00000102501ENSDART00000125686ENSDART00000134200ENSDART00000141892ENSDARG00000074812ENSDART00000111686ENSDART00000134470CIL_00064N_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000070055 ENSDART00000102501 N/A N/A N/A 0.802±0.00 N/A N/A N/A N/A 0.289±0.00 N/A N/A N/A N/A N/A
ENSDART00000125686 N/A N/A N/A N/A N/A N/A 2.907±2.10 N/A N/A N/A 1.190±0.00 N/A N/A N/A
ENSDART00000131628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134200 N/A N/A N/A N/A N/A N/A 3.306±0.00 N/A N/A N/A 0.599±0.00 N/A N/A N/A
ENSDART00000141892 N/A N/A N/A N/A N/A N/A N/A 4.300±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000074812 ENSDART00000111686 N/A N/A N/A 1.417±0.93 N/A N/A N/A 0.187±0.09 N/A N/A N/A N/A N/A N/A
ENSDART00000134470 N/A N/A N/A 0.831±0.00 N/A N/A 0.046±0.00 0.034±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028085 ENSMUST00000029726 3.452±0.94 3.806±0.59 1.765±0.25 2.879±2.01 2.738±0.70 1.250±0.30 4.513±0.62 9.404±2.00 4.262±1.67 0.854±0.27 3.349±0.22 4.109±1.87 3.292±0.69 3.663±1.94
ENSMUST00000107672 2.644±0.17 3.128±0.85 N/A 0.884±0.00 N/A 0.926±0.00 2.189±0.00 6.757±1.53 3.521±1.38 N/A N/A 2.093±1.00 0.921±0.28 2.301±0.19
ENSMUST00000107674 1.474±0.20 1.074±0.00 0.940±0.00 N/A 1.821±0.58 0.445±0.00 N/A N/A 3.030±0.00 0.600±0.00 N/A 1.601±0.52 N/A N/A
ENSMUST00000127348 1.739±0.49 0.886±0.17 1.301±0.01 0.914±0.15 3.342±1.47 0.912±0.28 4.009±0.87 4.960±0.60 1.416±0.48 0.947±0.39 3.564±0.51 1.889±0.49 0.880±0.10 0.891±0.43
ENSMUST00000134273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028086 ENSMUST00000029727 N/A N/A N/A 18.411±16.00 1.485±0.00 N/A N/A N/A N/A N/A N/A 3.268±0.82 N/A N/A
ENSMUST00000107675 0.744±0.23 N/A N/A N/A 1.216±0.57 1.961±0.50 11.165±1.62 0.956±0.33 0.793±0.35 2.141±0.29 4.691±0.68 3.096±0.61 N/A N/A
ENSMUST00000107678 0.402±0.00 N/A 1.381±0.09 2.788±0.60 1.076±0.00 0.933±0.00 N/A 0.587±0.26 0.602±0.21 N/A N/A 4.107±1.34 1.746±0.68 2.804±1.62
ENSMUST00000107679 1.531±0.25 N/A 2.624±0.04 3.700±2.08 1.459±0.00 N/A N/A 0.669±0.20 0.729±0.35 N/A 1.160±0.22 5.425±0.00 3.165±1.82 2.958±0.93
ENSMUST00000151410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031286 ENSMUST00000033643 N/A N/A N/A N/A 3.126±0.91 2.640±0.56 1.087±0.13 2.267±0.35 1.717±0.18 3.352±0.37 1.937±0.08 1.440±0.23 N/A 0.481±0.00
ENSMUST00000125216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.460±0.30 N/A N/A
ENSMUSG00000041842 ENSMUST00000091002 0.350±0.00 0.240±0.00 1.465±0.43 N/A 0.802±0.40 0.558±0.02 0.153±0.00 N/A 6.420±2.62 0.821±0.02 N/A 2.540±1.34 N/A N/A
ENSMUST00000107689 0.410±0.36 1.360±0.39 2.842±0.45 0.918±0.00 0.844±0.19 2.064±0.81 0.078±0.07 0.361±0.10 2.144±2.27 5.861±1.31 0.076±0.03 5.444±2.37 16.612±8.05 9.985±4.00
ENSMUST00000125643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131065 N/A N/A N/A N/A N/A N/A 0.211±0.04 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000047819 ENSMUST00000062623 0.074±0.06 N/A 0.217±0.06 0.016±0.01 0.040±0.00 0.061±0.02 N/A 0.016±0.00 0.008±0.01 0.056±0.03 3.050±0.54 0.096±0.05 0.009±0.00 0.032±0.03
ENSMUSG00000051000 ENSMUST00000094148 2.374±0.42 2.419±0.30 2.908±0.01 0.215±0.12 8.910±3.89 6.128±0.76 9.282±2.09 3.133±0.65 0.939±0.85 4.757±0.56 11.591±2.34 3.943±1.36 1.596±0.78 0.382±0.14
ENSMUST00000118408 0.464±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.011±0.49 N/A N/A
ENSMUST00000119077 N/A 0.657±0.00 N/A N/A 2.397±0.77 1.473±0.28 1.616±0.00 0.718±0.12 0.434±0.16 0.836±0.00 N/A 1.186±0.38 N/A 0.060±0.00
ENSMUST00000126445 N/A N/A N/A N/A N/A N/A N/A N/A 0.218±0.17 N/A N/A N/A N/A 0.070±0.00
ENSMUSG00000056498 ENSMUST00000107682 0.954±0.34 0.725±0.31 15.675±2.09 0.202±0.13 2.181±0.49 1.231±0.34 0.561±0.05 0.314±0.09 0.762±0.89 5.096±1.24 0.158±0.05 0.544±0.25 0.660±0.32 0.025±0.02
ENSMUST00000128344 N/A N/A N/A 0.091±0.00 N/A N/A N/A N/A N/A N/A N/A 1.894±0.00 4.482±0.00 0.038±0.00
ENSMUST00000129417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134890 N/A N/A N/A N/A 0.854±0.00 0.274±0.00 N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A
ENSMUSG00000074513 ENSMUST00000098990 N/A N/A 9.643±1.49 5.469±1.61 1.961±0.00 N/A 2.584±0.62 N/A 2.749±0.93 N/A 3.711±0.99 8.924±5.93 10.917±2.35 1.336±0.60
ENSMUST00000107687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143514 4.698±1.21 4.595±1.21 9.191±0.00 3.731±0.00 6.932±1.26 7.298±1.58 1.477±0.20 5.439±0.00 1.688±0.00 6.036±1.03 N/A 7.028±4.53 20.400±13.30 N/A
ENSMUST00000146862 N/A 5.826±1.18 N/A N/A 18.456±7.41 10.932±3.90 10.509±0.82 N/A 5.159±0.75 N/A N/A N/A N/A N/A
ENSMUST00000154148 0.988±0.00 2.357±0.00 N/A N/A 2.268±0.48 3.238±1.14 0.978±0.11 N/A N/A N/A 1.543±0.21 1.631±0.03 N/A 0.399±0.00
ENSMUSG00000080424 ENSMUST00000116774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2583.675±2.23 N/A N/A
ENSMUSG00000085527 ENSMUST00000128872 0.806±0.26 0.311±0.04 N/A N/A 1.155±0.51 N/A N/A N/A 0.205±0.10 0.521±0.17 0.464±0.00 1.070±0.43 0.403±0.16 0.687±0.11
ENSMUST00000148478 0.289±0.14 0.281±0.02 0.351±0.01 0.891±0.77 0.441±0.18 0.209±0.06 0.233±0.05 0.134±0.09 0.213±0.14 0.347±0.05 0.177±0.03 0.420±0.28 0.159±0.11 0.428±0.16
ENSMUSG00000085625 ENSMUST00000155930 0.093±0.01 N/A 0.140±0.08 0.071±0.04 N/A N/A N/A 0.099±0.00 0.018±0.01 0.122±0.00 N/A N/A 0.130±0.04 0.138±0.06
ENSMUSG00000099995 ENSMUST00000189046 N/A N/A N/A N/A N/A N/A N/A 0.126±0.04 N/A N/A N/A N/A N/A 20.419±1.06
ENSMUSG00000100840 ENSMUST00000185907 N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A N/A N/A 0.039±0.00 N/A N/A N/A

Loading