C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00065L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172404-ENSG00000100387 CGP 9606 22:40859549-40973309
GeneTranscriptPositionBiotype
ENSG00000100387 (RBX1)
ring-box 1, E3 ubiquitin protein ligase 		ENST00000216225 (RBX1-001) 40951359-40973309 protein_coding
ENST00000467617 (RBX1-002) 40966201-40972662 retained_intron
ENST00000476110 (RBX1-003) 40951347-40964411 retained_intron
ENSG00000172404 (DNAJB7)
DnaJ (Hsp40) homolog, subfamily B, member 7 		ENST00000307221 (DNAJB7-001) 40859549-40862126 protein_coding
ENSG00000196236 (XPNPEP3)
X-prolyl aminopeptidase (aminopeptidase P) 3, putative 		ENST00000357137 (XPNPEP3-001) 40857098-40932815 protein_coding
ENST00000417688 (XPNPEP3-005) 40857077-40870343 retained_intron
ENST00000428799 (XPNPEP3-004) 40857131-40927505 nonsense_mediated_decay
ENST00000465258 (XPNPEP3-006) 40862266-40881924 processed_transcript
ENST00000482652 (XPNPEP3-002) 40857097-40862770 processed_transcript
ENST00000614001 (XPNPEP3-201) 40857120-40860781 protein_coding
ENSG00000200683 (RNU6-379P)
RNA, U6 small nuclear 379, pseudogene 		ENST00000363813 (RNU6-379P-201) 40917743-40917846 snRNA
ENSG00000273979 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000616394 (Metazoa_SRP.1-257) 40917111-40917381 misc_RNA
CIL_00065L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047108-ENSMUSG00000022400 CGP 10090 15:81406926-81476369
GeneTranscriptPositionBiotype
ENSMUSG00000022400 (Rbx1)
ring-box 1 		ENSMUST00000023036 (Rbx1-201) 81466316-81476369 protein_coding
ENSMUSG00000022401 (Xpnpep3)
X-prolyl aminopeptidase (aminopeptidase P) 3, putative 		ENSMUST00000041609 (Xpnpep3-003) 81400188-81454888 protein_coding
ENSMUST00000163296 (Xpnpep3-002) 81400150-81427954 retained_intron
ENSMUST00000163754 (Xpnpep3-001) 81400138-81456807 protein_coding
ENSMUST00000164144 (Xpnpep3-005) 81400233-81427538 processed_transcript
ENSMUST00000165258 (Xpnpep3-004) 81400196-81453031 nonsense_mediated_decay
ENSMUST00000166831 (Xpnpep3-006) 81400170-81416309 retained_intron
ENSMUST00000167799 (Xpnpep3-007) 81400197-81438158 nonsense_mediated_decay
ENSMUSG00000047108 (Dnajb7)
DnaJ (Hsp40) homolog, subfamily B, member 7 		ENSMUST00000057236 (Dnajb7-001) 81406926-81408299 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065L_0001ENSG00000100387ENST00000216225ENST00000467617ENST00000476110ENSG00000172404ENST00000307221ENSG00000196236ENST00000357137ENST00000417688ENST00000428799ENST00000465258ENST00000482652ENST00000614001ENSG00000200683ENST00000363813ENSG00000273979ENST00000616394CIL_00065L_0002ENSMUSG00000022400ENSMUST00000023036ENSMUSG00000022401ENSMUST00000041609ENSMUST00000163296ENSMUST00000163754ENSMUST00000164144ENSMUST00000165258ENSMUST00000166831ENSMUST00000167799ENSMUSG00000047108ENSMUST00000057236
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065L_0001ENSG00000100387ENST00000216225ENST00000467617ENST00000476110ENSG00000172404ENST00000307221ENSG00000196236ENST00000357137ENST00000428799ENST00000482652ENSG00000200683ENST00000363813ENSG00000273979ENST00000616394CIL_00065L_0002ENSMUSG00000022400ENSMUST00000023036ENSMUSG00000022401ENSMUST00000041609ENSMUST00000163296ENSMUST00000163754ENSMUST00000167799ENSMUSG00000047108ENSMUST00000057236
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100387 ENST00000216225 19.593±0.00 32.897±0.00 0.318±0.00 16.365±10.20 23.947±0.00 8.670±7.78 10.911±10.00 14.893±11.29 9.346±6.66 16.961±15.06 7.818±5.04 13.516±8.55 26.904±11.68 20.396±14.02
ENST00000467617 N/A N/A 0.148±0.00 N/A 0.942±0.00 0.428±0.00 N/A N/A N/A N/A N/A 1.277±0.00 N/A 1.581±0.00
ENST00000476110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.428±0.00 5.702±0.00
ENSG00000172404 ENST00000307221 N/A 1.051±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.333±0.18 3.384±1.68
ENSG00000196236 ENST00000357137 2.247±0.00 1.687±0.00 1.034±0.00 0.984±0.00 1.453±1.04 0.793±0.09 2.278±1.66 1.978±0.17 1.227±0.74 0.801±0.00 1.061±0.72 1.110±0.30 0.295±0.06 1.755±0.72
ENST00000417688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428799 N/A N/A 0.869±0.00 0.769±0.00 2.191±0.00 0.688±0.00 0.659±0.00 2.389±0.00 1.691±0.00 2.206±0.00 0.184±0.00 2.097±0.37 0.439±0.04 5.145±1.27
ENST00000465258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.376±0.00 N/A
ENST00000614001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200683 ENST00000363813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.567±0.00
ENSG00000273979 ENST00000616394 0.336±0.00 0.771±0.00 N/A 0.125±0.00 0.240±0.00 0.055±0.00 0.267±0.00 0.118±0.00 0.103±0.00 0.112±0.00 N/A N/A N/A 0.428±0.27
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022400 ENSMUST00000023036 12.649±2.55 11.521±1.13 38.271±4.45 42.341±17.54 13.011±2.32 11.271±3.44 15.737±1.26 23.518±2.54 25.205±11.25 20.036±2.90 29.434±1.02 13.091±5.95 28.929±17.39 9.682±4.53
ENSMUSG00000022401 ENSMUST00000041609 N/A 0.776±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.120±0.00
ENSMUST00000163296 N/A 2.819±0.80 N/A N/A N/A N/A N/A N/A N/A 1.382±0.00 N/A N/A N/A N/A
ENSMUST00000163754 2.201±0.56 3.641±0.72 2.144±1.58 1.966±1.26 4.062±0.27 1.025±0.61 0.734±0.46 1.545±0.44 1.975±0.92 1.367±0.71 0.323±0.10 2.942±1.56 2.527±1.72 2.396±1.15
ENSMUST00000164144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167799 N/A N/A N/A N/A N/A 3.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000047108 ENSMUST00000057236 0.056±0.03 N/A 0.102±0.03 0.053±0.01 0.040±0.00 0.242±0.17 0.083±0.03 0.097±0.02 0.114±0.07 0.133±0.11 0.032±0.01 0.253±0.12 0.073±0.02 54.046±5.92

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