C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00065N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100401-ENSG00000100403 CGP 9606 22:41245611-41360147
GeneTranscriptPositionBiotype
ENSG00000100401 (RANGAP1)
Ran GTPase activating protein 1 		ENST00000356244 (RANGAP1-001) 41245611-41286251 protein_coding
ENST00000405486 (RANGAP1-003) 41245611-41285965 protein_coding
ENST00000418067 (RANGAP1-008) 41268097-41281638 protein_coding
ENST00000422838 (RANGAP1-006) 41280933-41285905 protein_coding
ENST00000446258 (RANGAP1-007) 41256021-41274660 protein_coding
ENST00000452543 (RANGAP1-009) 41264744-41281621 protein_coding
ENST00000455915 (RANGAP1-004) 41245615-41282514 protein_coding
ENSG00000100403 (ZC3H7B)
zinc finger CCCH-type containing 7B 		ENST00000352645 (ZC3H7B-001) 41301522-41360147 protein_coding
ENST00000486331 (ZC3H7B-002) 41301715-41336843 retained_intron
ENSG00000274552 (MIR6889)
microRNA 6889 		ENST00000613185 (MIR6889-201) 41252992-41253050 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00065N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022391-ENSMUSG00000022390 CGP 10090 15:81704248-81796269
GeneTranscriptPositionBiotype
ENSMUSG00000022390 (Zc3h7b)
zinc finger CCCH type containing 7B 		ENSMUST00000109554 (Zc3h7b-201) 81744848-81796269 protein_coding
ENSMUSG00000022391 (Rangap1)
RAN GTPase activating protein 1 		ENSMUST00000052374 (Rangap1-201) 81704248-81729919 protein_coding
ENSMUST00000170134 (Rangap1-202) 81704248-81729919 protein_coding
ENSMUST00000171115 (Rangap1-203) 81704618-81729866 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065N_0001ENSG00000100401ENST00000356244ENST00000405486ENST00000418067ENST00000422838ENST00000446258ENST00000452543ENST00000455915ENSG00000100403ENST00000352645ENST00000486331ENSG00000274552ENST00000613185CIL_00065N_0002ENSMUSG00000022390ENSMUST00000109554ENSMUSG00000022391ENSMUST00000052374ENSMUST00000170134ENSMUST00000171115
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065N_0001ENSG00000100401ENST00000356244ENST00000405486ENST00000418067ENST00000446258ENST00000452543ENST00000455915ENSG00000100403ENST00000352645ENST00000486331ENSG00000274552ENST00000613185CIL_00065N_0002ENSMUSG00000022390ENSMUST00000109554ENSMUSG00000022391ENSMUST00000052374ENSMUST00000170134ENSMUST00000171115
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100401 ENST00000356244 18.523±0.00 17.970±0.00 0.617±0.00 33.163±20.47 8.348±7.19 9.304±8.88 4.892±3.87 12.627±10.17 10.931±8.77 23.173±21.65 7.975±6.35 19.430±9.97 27.290±6.88 43.259±13.28
ENST00000405486 N/A N/A N/A N/A N/A N/A 0.230±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000418067 N/A N/A N/A N/A N/A 1.236±0.00 N/A N/A N/A N/A N/A 5.409±0.00 N/A N/A
ENST00000422838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.576±0.00 40.417±0.00 132.816±0.00
ENST00000452543 N/A N/A N/A N/A 2.663±0.00 N/A 1.536±0.00 N/A 3.347±0.00 1.897±0.00 N/A N/A N/A 57.328±0.00
ENST00000455915 N/A N/A 0.090±0.00 N/A N/A 0.394±0.00 N/A N/A 0.484±0.00 0.226±0.00 N/A N/A N/A N/A
ENSG00000100403 ENST00000352645 16.289±0.00 19.866±0.00 3.665±0.00 17.141±10.07 12.229±10.21 9.121±7.07 6.642±4.56 11.869±8.27 10.228±7.00 12.421±9.94 5.185±2.68 28.918±19.42 14.685±1.67 11.081±5.26
ENST00000486331 N/A N/A N/A N/A 0.707±0.00 0.269±0.00 N/A 0.411±0.00 0.425±0.00 N/A N/A N/A N/A N/A
ENSG00000274552 ENST00000613185 N/A N/A N/A 1.068±0.00 N/A N/A 1.937±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022390 ENSMUST00000109554 15.208±4.66 24.250±0.52 6.952±0.81 32.454±4.33 10.773±5.37 10.450±1.18 8.738±2.67 12.860±4.93 5.044±0.85 17.160±4.08 7.514±0.75 22.620±7.52 5.608±4.14 2.646±1.23
ENSMUSG00000022391 ENSMUST00000052374 13.772±3.05 15.512±2.30 12.178±0.65 37.759±2.64 11.676±3.39 18.693±1.90 5.698±0.72 10.657±2.17 28.042±18.20 11.189±0.84 8.378±1.07 18.912±3.16 37.535±18.60 N/A
ENSMUST00000170134 2.628±0.00 2.109±0.33 2.287±0.10 N/A 2.922±0.55 3.636±0.83 0.990±0.15 2.817±1.21 2.311±0.59 2.314±0.62 1.036±0.00 3.728±0.98 N/A N/A
ENSMUST00000171115 1.729±0.00 N/A N/A 41.665±0.00 N/A N/A N/A 1.662±0.00 N/A N/A N/A 20.627±0.00 28.533±21.00 88.995±8.09

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