C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00065Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186810-ENSG00000215115 CGP 9606 X:71615916-71718151
GeneTranscriptPositionBiotype
ENSG00000186810 (CXCR3)
chemokine (C-X-C motif) receptor 3
ENST00000373691 (CXCR3-001) 71615916-71618510 protein_coding
ENST00000373693 (CXCR3-002) 71615916-71618517 protein_coding
ENSG00000237265 (RP11-402P6.9)
ENST00000422194 (RP11-402P6.9-001) 71662995-71665753 lincRNA
ENST00000433410 (RP11-402P6.9-002) 71662998-71664271 retained_intron
CIL_00065Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050232-ENSMUSG00000046774 CGP 10090 X:101731535-101798642
GeneTranscriptPositionBiotype
ENSMUSG00000045010 (Gm4779)
predicted gene 4779
ENSMUST00000056225 (Gm4779-201) 101791225-101793308 antisense
ENSMUST00000124577 (Gm4779-001) 101790053-101793263 antisense
ENSMUST00000147742 (Gm4779-002) 101790348-101792334 antisense
ENSMUSG00000046774 (8030474K03Rik)
RIKEN cDNA 8030474K03 gene
ENSMUST00000145887 (8030474K03Rik-003) 101796681-101798642 protein_coding
ENSMUST00000149761 (8030474K03Rik-001) 101794686-101798640 processed_transcript
ENSMUST00000151231 (8030474K03Rik-201) 101794656-101798638 protein_coding
ENSMUST00000163399 (8030474K03Rik-002) 101794656-101798638 nonsense_mediated_decay
ENSMUSG00000050232 (Cxcr3)
chemokine (C-X-C motif) receptor 3
ENSMUST00000056614 (Cxcr3-001) 101731535-101734269 protein_coding
ENSMUSG00000082541 (Gm9095)
predicted gene 9095
ENSMUST00000117607 (Gm9095-001) 101787766-101788646 processed_pseudogene
ENSMUSG00000084284 (Tpt1-ps6)
tumor protein, translationally-controlled, pseudogene 6
ENSMUST00000121768 (Tpt1-ps6-001) 101768535-101769057 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065Y_0001ENSG00000186810ENST00000373691ENST00000373693ENSG00000237265ENST00000422194ENST00000433410CIL_00065Y_0002ENSMUSG00000045010ENSMUST00000056225ENSMUST00000124577ENSMUST00000147742ENSMUSG00000046774ENSMUST00000145887ENSMUST00000149761ENSMUST00000151231ENSMUST00000163399ENSMUSG00000050232ENSMUST00000056614ENSMUSG00000082541ENSMUST00000117607ENSMUSG00000084284ENSMUST00000121768
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065Y_0001ENSG00000186810ENST00000373691ENST00000373693ENSG00000237265ENST00000422194ENST00000433410CIL_00065Y_0002ENSMUSG00000045010ENSMUST00000056225ENSMUST00000124577ENSMUST00000147742ENSMUSG00000046774ENSMUST00000145887ENSMUST00000149761ENSMUST00000151231ENSMUST00000163399ENSMUSG00000050232ENSMUST00000056614ENSMUSG00000082541ENSMUST00000117607ENSMUSG00000084284ENSMUST00000121768
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000186810 ENST00000373691 N/A 0.859±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373693 0.087±0.00 5.000±0.00 0.130±0.00 0.047±0.00 0.532±0.03 0.316±0.00 0.098±0.06 0.339±0.00 0.092±0.06 0.434±0.24 N/A 0.699±0.26 0.389±0.11 0.222±0.15
ENSG00000237265 ENST00000422194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.276±0.04
ENST00000433410 0.162±0.00 N/A N/A 0.135±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045010 ENSMUST00000056225 N/A N/A 0.045±0.00 0.057±0.04 0.079±0.00 0.072±0.00 N/A N/A 0.048±0.05 N/A 0.162±0.00 0.533±0.40 1.116±0.95 4.309±0.00
ENSMUST00000124577 N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A 0.033±0.00 N/A N/A 0.108±0.00 0.120±0.05 N/A
ENSMUST00000147742 0.186±0.00 0.422±0.18 N/A 0.454±0.42 N/A N/A N/A 0.136±0.04 0.056±0.00 0.142±0.00 0.052±0.00 0.435±0.24 N/A N/A
ENSMUSG00000046774 ENSMUST00000145887 N/A N/A N/A 0.049±0.00 N/A N/A 0.088±0.00 N/A 0.047±0.00 N/A N/A 0.209±0.03 0.397±0.26 0.994±0.00
ENSMUST00000149761 0.040±0.00 N/A 0.017±0.00 0.006±0.00 N/A N/A N/A N/A N/A N/A 0.045±0.00 0.090±0.04 0.104±0.03 N/A
ENSMUST00000151231 N/A N/A 0.025±0.00 0.040±0.00 N/A N/A N/A N/A 0.006±0.00 0.017±0.00 0.014±0.00 0.099±0.05 0.444±0.25 N/A
ENSMUST00000163399 N/A N/A 0.039±0.00 0.007±0.00 N/A N/A N/A N/A 0.030±0.01 N/A 0.061±0.00 N/A 0.327±0.05 1.404±0.50
ENSMUSG00000050232 ENSMUST00000056614 2.136±0.65 0.974±0.19 0.849±0.31 0.034±0.00 10.628±2.41 1.636±0.31 0.232±0.07 1.383±0.43 0.651±0.41 2.212±0.47 0.104±0.06 1.894±0.80 0.085±0.09 0.062±0.01
ENSMUSG00000082541 ENSMUST00000117607 N/A N/A 0.010±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084284 ENSMUST00000121768 0.142±0.04 N/A 0.110±0.04 0.065±0.02 0.253±0.00 N/A 0.089±0.00 N/A 0.024±0.01 0.259±0.03 0.147±0.07 0.500±0.37 0.391±0.29 0.089±0.00

Loading