C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00066A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102309-ENSG00000102309 CGP 9606 X:72181353-72302926
GeneTranscriptPositionBiotype
ENSG00000102309 (PIN4)
protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) 		ENST00000218432 (PIN4-002) 72181676-72198337 protein_coding
ENST00000373662 (PIN4-004) 72181353-72197101 nonsense_mediated_decay
ENST00000373669 (PIN4-001) 72181679-72198344 protein_coding
ENST00000423432 (PIN4-201) 72181676-72263964 protein_coding
ENST00000439980 (PIN4-006) 72181765-72302926 nonsense_mediated_decay
ENST00000446576 (PIN4-003) 72181794-72197354 protein_coding
ENST00000496835 (PIN4-005) 72181765-72263126 protein_coding
ENSG00000186871 (ERCC6L)
excision repair cross-complementation group 6-like 		ENST00000334463 (ERCC6L-002) 72204660-72239047 protein_coding
ENST00000373657 (ERCC6L-001) 72204657-72239027 protein_coding
ENSG00000198034 (RPS4X)
ribosomal protein S4, X-linked 		ENST00000316084 (RPS4X-001) 72272042-72277300 protein_coding
ENST00000373626 (RPS4X-002) 72274255-72277248 protein_coding
ENST00000470671 (RPS4X-004) 72255679-72273371 processed_transcript
ENST00000486733 (RPS4X-003) 72272713-72276227 processed_transcript
ENST00000492695 (RPS4X-005) 72255784-72272723 processed_transcript
ENSG00000239577 (RN7SL388P)
RNA, 7SL, cytoplasmic 388, pseudogene 		ENST00000498736 (RN7SL388P-201) 72198712-72199050 misc_RNA
CIL_00066A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000079480-ENSMUSG00000051220 CGP 10090 X:102119447-102157091
GeneTranscriptPositionBiotype
ENSMUSG00000051220 (Ercc6l)
excision repair cross-complementing rodent repair deficiency complementation group 6 like 		ENSMUST00000056904 (Ercc6l-001) 102141716-102157091 protein_coding
ENSMUSG00000079480 (Pin4)
protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) 		ENSMUST00000113627 (Pin4-001) 102119447-102127669 protein_coding
ENSMUST00000144367 (Pin4-002) 102119569-102127666 processed_transcript
ENSMUSG00000081969 (Gm16471)
predicted gene 16471 		ENSMUST00000121940 (Gm16471-001) 102138613-102139230 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00066A_0001ENSG00000102309ENST00000218432ENST00000373662ENST00000373669ENST00000423432ENST00000439980ENST00000446576ENST00000496835ENSG00000186871ENST00000334463ENST00000373657ENSG00000198034ENST00000316084ENST00000373626ENST00000470671ENST00000486733ENST00000492695ENSG00000239577ENST00000498736CIL_00066A_0002ENSMUSG00000051220ENSMUST00000056904ENSMUSG00000079480ENSMUST00000113627ENSMUST00000144367ENSMUSG00000081969ENSMUST00000121940
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00066A_0001ENSG00000102309ENST00000218432ENST00000373669ENST00000423432ENST00000439980ENST00000446576ENSG00000186871ENST00000334463ENST00000373657ENSG00000198034ENST00000316084ENSG00000239577ENST00000498736CIL_00066A_0002ENSMUSG00000051220ENSMUST00000056904ENSMUSG00000079480ENSMUST00000113627ENSMUST00000144367ENSMUSG00000081969ENSMUST00000121940
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102309 ENST00000218432 N/A N/A 0.592±0.00 N/A N/A 0.478±0.00 N/A N/A N/A 0.458±0.00 N/A 0.327±0.00 N/A N/A
ENST00000373662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373669 3.285±0.00 4.447±0.00 N/A 4.466±0.40 3.184±1.78 4.108±2.82 1.596±0.81 3.442±2.80 2.415±1.79 1.099±0.34 1.877±0.37 4.737±2.96 6.312±1.79 5.102±1.29
ENST00000423432 N/A 1.300±0.00 N/A 1.439±0.00 N/A N/A 0.085±0.00 N/A N/A N/A N/A 0.212±0.00 N/A N/A
ENST00000439980 N/A N/A 0.346±0.00 N/A N/A 6.018±0.00 N/A 2.463±1.78 3.834±0.00 3.701±0.00 2.894±0.00 9.763±0.00 5.787±3.33 N/A
ENST00000446576 N/A N/A N/A N/A N/A N/A 0.175±0.00 N/A 0.495±0.00 0.416±0.00 N/A N/A N/A N/A
ENST00000496835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000186871 ENST00000334463 N/A 0.072±0.00 0.292±0.00 0.024±0.02 0.252±0.20 0.452±0.35 0.038±0.01 0.050±0.03 0.016±0.00 0.053±0.04 0.029±0.00 1.473±0.75 0.288±0.19 0.610±0.07
ENST00000373657 0.075±0.00 N/A N/A 0.020±0.00 N/A N/A N/A 0.076±0.00 0.020±0.00 N/A N/A N/A N/A N/A
ENSG00000198034 ENST00000316084 487.882±0.00 130.741±0.00 54.367±0.00 107.688±23.11 248.881±167.76 402.691±271.14 44.753±7.05 185.131±94.35 109.396±2.13 260.979±147.04 85.879±57.99 617.922±540.41 472.887±367.41 180.759±142.29
ENST00000373626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239577 ENST00000498736 N/A N/A N/A N/A 0.442±0.33 N/A 0.067±0.02 0.437±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000051220 ENSMUST00000056904 0.544±0.39 0.045±0.02 0.267±0.04 0.713±0.41 0.324±0.05 0.780±0.17 0.110±0.01 0.133±0.02 1.972±2.29 0.340±0.08 0.054±0.02 0.789±0.27 1.999±1.16 0.527±0.06
ENSMUSG00000079480 ENSMUST00000113627 1.757±0.82 0.664±0.31 26.574±3.52 12.784±6.16 0.940±0.64 1.260±0.61 1.522±0.38 3.439±1.11 22.233±21.96 1.278±0.44 19.523±1.90 9.364±15.56 21.926±14.59 4.607±2.27
ENSMUST00000144367 0.187±0.00 N/A N/A N/A N/A N/A 0.214±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081969 ENSMUST00000121940 N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A 0.038±0.03 N/A N/A 0.070±0.00 0.079±0.07 N/A

Loading